RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CHCHD10Q8WYQ3 142 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-208ENST00000571043 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
RPAIN-208ENST00000571043 EIF4EBP3O60516 100 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-208ENST00000571043 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
RPAIN-208ENST00000571043 IGHV3-33P01772 117 aa11.78□□□□□ -0.52
RPAIN-208ENST00000571043 LYRM7Q5U5X0 104 aa11.78□□□□□ -0.52
RPAIN-208ENST00000571043 LINC00308Q8TCZ7 52 aa11.78□□□□□ -0.52
RPAIN-208ENST00000571043 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
RPAIN-208ENST00000571043 COX7A2LO14548 114 aa11.77□□□□□ -0.52
RPAIN-208ENST00000571043 Q8IZM0 81 aa11.77□□□□□ -0.52
RPAIN-208ENST00000571043 ERG28Q9UKR5 140 aa11.77□□□□□ -0.52
RPAIN-208ENST00000571043 DAND5Q8N907 189 aa11.76□□□□□ -0.53
RPAIN-208ENST00000571043 STARD9Q9P2P6 4700 aa11.76□□□□□ -0.53
RPAIN-208ENST00000571043 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
RPAIN-208ENST00000571043 PLECQ15149 4684 aaKnown RBP11.75□□□□□ -0.53
RPAIN-208ENST00000571043 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
RPAIN-208ENST00000571043 NPC2P61916 151 aa11.75□□□□□ -0.53
RPAIN-208ENST00000571043 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
RPAIN-208ENST00000571043 FOXI1Q12951 378 aa11.74□□□□□ -0.53
RPAIN-208ENST00000571043 IGLV10-54A0A075B6I4 117 aa11.73□□□□□ -0.53
RPAIN-208ENST00000571043 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
RPAIN-208ENST00000571043 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
RPAIN-208ENST00000571043 ESRGQ1W209 222 aa11.73□□□□□ -0.53
RPAIN-208ENST00000571043 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
RPAIN-208ENST00000571043 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
RPAIN-208ENST00000571043 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
RPAIN-208ENST00000571043 MALP21145 153 aa11.72□□□□□ -0.53
RPAIN-208ENST00000571043 CXCL5P42830 114 aa11.72□□□□□ -0.53
RPAIN-208ENST00000571043 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
RPAIN-208ENST00000571043 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
RPAIN-208ENST00000571043 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
RPAIN-208ENST00000571043 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
RPAIN-208ENST00000571043 WFDC10BQ8IUB3 73 aa11.71□□□□□ -0.53
RPAIN-208ENST00000571043 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
RPAIN-208ENST00000571043 TRBV20-1A0A075B6N2 111 aa11.7□□□□□ -0.54
RPAIN-208ENST00000571043 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
RPAIN-208ENST00000571043 CRPP02741 224 aa11.7□□□□□ -0.54
RPAIN-208ENST00000571043 KIAA0087Q14695 138 aa11.7□□□□□ -0.54
RPAIN-208ENST00000571043 LINC00158P58513 81 aa11.7□□□□□ -0.54
RPAIN-208ENST00000571043 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
RPAIN-208ENST00000571043 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-208ENST00000571043 TRBV30A0A0K0K1B3 111 aa11.69□□□□□ -0.54
RPAIN-208ENST00000571043 F8W1H4 67 aa11.69□□□□□ -0.54
RPAIN-208ENST00000571043 H3BMG7 143 aa11.69□□□□□ -0.54
RPAIN-208ENST00000571043 Q1RN00 199 aa11.69□□□□□ -0.54
RPAIN-208ENST00000571043 CFAP161Q6P656 301 aa11.69□□□□□ -0.54
RPAIN-208ENST00000571043 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
RPAIN-208ENST00000571043 PSMB2P49721 201 aa11.68□□□□□ -0.54
RPAIN-208ENST00000571043 CKS1BP61024 79 aa11.68□□□□□ -0.54
RPAIN-208ENST00000571043 UBE2WQ96B02 151 aa11.68□□□□□ -0.54
RPAIN-208ENST00000571043 H7C2G1 150 aa11.67□□□□□ -0.54
RPAIN-208ENST00000571043 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
RPAIN-208ENST00000571043 APLNQ9ULZ1 77 aa11.66□□□□□ -0.54
RPAIN-208ENST00000571043 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.54
RPAIN-208ENST00000571043 C3orf84H3BNL1 204 aa11.65□□□□□ -0.55
RPAIN-208ENST00000571043 TCL1BO95988 128 aa11.65□□□□□ -0.55
RPAIN-208ENST00000571043 COX17Q14061 63 aa11.65□□□□□ -0.55
RPAIN-208ENST00000571043 C2orf82Q6UX34 121 aa11.65□□□□□ -0.55
RPAIN-208ENST00000571043 PFN2P35080 140 aa11.64□□□□□ -0.55
RPAIN-208ENST00000571043 PRO0461Q9UI25 63 aa11.64□□□□□ -0.55
RPAIN-208ENST00000571043 TRIAP1O43715 76 aa11.63□□□□□ -0.55
RPAIN-208ENST00000571043 SPAG11BQ08648 103 aa11.63□□□□□ -0.55
RPAIN-208ENST00000571043 LYSTQ99698 3801 aa11.63□□□□□ -0.55
RPAIN-208ENST00000571043 COX6CP09669 75 aa11.62□□□□□ -0.55
RPAIN-208ENST00000571043 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
RPAIN-208ENST00000571043 CCL18P55774 89 aa11.62□□□□□ -0.55
RPAIN-208ENST00000571043 CASC10Q5T4H9 136 aa11.62□□□□□ -0.55
RPAIN-208ENST00000571043 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
RPAIN-208ENST00000571043 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
RPAIN-208ENST00000571043 TRAV13-2A0A0B4J235 113 aa11.61□□□□□ -0.55
RPAIN-208ENST00000571043 KRTAP26-1Q6PEX3 210 aa11.61□□□□□ -0.55
RPAIN-208ENST00000571043 OCIAD2Q56VL3 154 aa11.6□□□□□ -0.55
RPAIN-208ENST00000571043 WFDC2Q14508 124 aa11.6□□□□□ -0.55
RPAIN-208ENST00000571043 ATXN8Q156A1 80 aa11.6□□□□□ -0.55
RPAIN-208ENST00000571043 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.56
RPAIN-208ENST00000571043 IGKV2-28A0A075B6P5 120 aa11.57□□□□□ -0.56
RPAIN-208ENST00000571043 GVQW2A0A096LPI5 108 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-208ENST00000571043 IGKV2D-28P01615 120 aa11.57□□□□□ -0.56
RPAIN-208ENST00000571043 C1orf43Q9BWL3 253 aa11.57□□□□□ -0.56
RPAIN-208ENST00000571043 DNAH1Q9P2D7 4330 aa11.57□□□□□ -0.56
RPAIN-208ENST00000571043 K7ERU9 68 aa11.56□□□□□ -0.56
RPAIN-208ENST00000571043 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-208ENST00000571043 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
RPAIN-208ENST00000571043 C6orf223Q8N319 242 aa11.55□□□□□ -0.56
RPAIN-208ENST00000571043 MTURNQ8N3F0 131 aa11.55□□□□□ -0.56
RPAIN-208ENST00000571043 LINC00337Q8N6G1 96 aa11.55□□□□□ -0.56
RPAIN-208ENST00000571043 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
RPAIN-208ENST00000571043 M0QXV9 152 aa11.54□□□□□ -0.56
RPAIN-208ENST00000571043 NDUFC2O95298 119 aa11.54□□□□□ -0.56
RPAIN-208ENST00000571043 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-208ENST00000571043 C10orf25Q5T742 122 aa11.54□□□□□ -0.56
RPAIN-208ENST00000571043 LINC01620Q4KN68 170 aa11.53□□□□□ -0.56
RPAIN-208ENST00000571043 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
RPAIN-208ENST00000571043 RPL28P46779 137 aaKnown RBP11.52□□□□□ -0.57
RPAIN-208ENST00000571043 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-208ENST00000571043 ALMS1Q8TCU4 4167 aa11.52□□□□□ -0.57
RPAIN-208ENST00000571043 IGKV2D-24A0A075B6R9 120 aa11.51□□□□□ -0.57
RPAIN-208ENST00000571043 F8WDY8 70 aa11.51□□□□□ -0.57
RPAIN-208ENST00000571043 LST1O00453 97 aa11.51□□□□□ -0.57
RPAIN-208ENST00000571043 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms