RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 CDKN2A-AS1Q9UH64 79 aa7.94□□□□□ -1.14
TVP23B-204ENST00000571018 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
TVP23B-204ENST00000571018 A0A096LNJ9 63 aa7.93□□□□□ -1.14
TVP23B-204ENST00000571018 PMVKQ15126 192 aa7.93□□□□□ -1.14
TVP23B-204ENST00000571018 CDIP1Q9H305 208 aa7.93□□□□□ -1.14
TVP23B-204ENST00000571018 CST9LQ9H4G1 147 aa7.93□□□□□ -1.14
TVP23B-204ENST00000571018 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
TVP23B-204ENST00000571018 TINCRA0A1B0GVN0 87 aa7.92□□□□□ -1.14
TVP23B-204ENST00000571018 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
TVP23B-204ENST00000571018 C9orf116Q5BN46 136 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-204ENST00000571018 C2orf82Q6UX34 121 aa7.92□□□□□ -1.14
TVP23B-204ENST00000571018 Q8IZM0 81 aa7.92□□□□□ -1.14
TVP23B-204ENST00000571018 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
TVP23B-204ENST00000571018 PACRGQ96M98 296 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-204ENST00000571018 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 PRSS2P07478 247 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 RAB5BP61020 215 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 Q6ZRP5 223 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 CBLN2Q8IUK8 224 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
TVP23B-204ENST00000571018 OXTP01178 125 aa7.9□□□□□ -1.14
TVP23B-204ENST00000571018 HBDP02042 147 aa7.9□□□□□ -1.14
TVP23B-204ENST00000571018 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
TVP23B-204ENST00000571018 SMIM1B2RUZ4 78 aa7.89□□□□□ -1.15
TVP23B-204ENST00000571018 CKS1BP61024 79 aa7.89□□□□□ -1.15
TVP23B-204ENST00000571018 PRR3P79522 188 aaKnown RBP7.89□□□□□ -1.15
TVP23B-204ENST00000571018 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
TVP23B-204ENST00000571018 PDZD11Q5EBL8 140 aa7.89□□□□□ -1.15
TVP23B-204ENST00000571018 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
TVP23B-204ENST00000571018 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
TVP23B-204ENST00000571018 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
TVP23B-204ENST00000571018 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
TVP23B-204ENST00000571018 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
TVP23B-204ENST00000571018 ATP5LO75964 103 aa7.87□□□□□ -1.15
TVP23B-204ENST00000571018 CHCHD1Q96BP2 118 aaKnown RBP7.87□□□□□ -1.15
TVP23B-204ENST00000571018 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
TVP23B-204ENST00000571018 F8VRH5 84 aa7.86□□□□□ -1.15
TVP23B-204ENST00000571018 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
TVP23B-204ENST00000571018 CXCL5P42830 114 aa7.86□□□□□ -1.15
TVP23B-204ENST00000571018 NDUFA6P56556 154 aa7.86□□□□□ -1.15
TVP23B-204ENST00000571018 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
TVP23B-204ENST00000571018 H3BRM9 83 aa7.85□□□□□ -1.15
TVP23B-204ENST00000571018 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
TVP23B-204ENST00000571018 COX7B2Q8TF08 81 aa7.85□□□□□ -1.15
TVP23B-204ENST00000571018 TRGC2P03986 189 aa7.84□□□□□ -1.15
TVP23B-204ENST00000571018 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
TVP23B-204ENST00000571018 C9orf129Q5T035 196 aaKnown RBP7.84□□□□□ -1.15
TVP23B-204ENST00000571018 BAGE3Q86Y29 109 aa7.84□□□□□ -1.15
TVP23B-204ENST00000571018 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
TVP23B-204ENST00000571018 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
TVP23B-204ENST00000571018 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
TVP23B-204ENST00000571018 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
TVP23B-204ENST00000571018 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
TVP23B-204ENST00000571018 IGLV5-39A0A0G2JS06 123 aa7.82□□□□□ -1.16
TVP23B-204ENST00000571018 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
TVP23B-204ENST00000571018 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
TVP23B-204ENST00000571018 HERC1Q15751 4861 aa7.82□□□□□ -1.16
TVP23B-204ENST00000571018 COLCA2A8K830 154 aa7.81□□□□□ -1.16
TVP23B-204ENST00000571018 HSBP1O75506 76 aa7.81□□□□□ -1.16
TVP23B-204ENST00000571018 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
TVP23B-204ENST00000571018 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
TVP23B-204ENST00000571018 M0QXV9 152 aa7.8□□□□□ -1.16
TVP23B-204ENST00000571018 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
TVP23B-204ENST00000571018 CHTOPQ9Y3Y2 248 aaKnown RBP7.8□□□□□ -1.16
TVP23B-204ENST00000571018 TRAV12-1A0A0B4J245 112 aa7.79□□□□□ -1.16
TVP23B-204ENST00000571018 MT1HL1P0DM35 61 aa7.79□□□□□ -1.16
TVP23B-204ENST00000571018 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
TVP23B-204ENST00000571018 FAM19A2Q8N3H0 131 aa7.79□□□□□ -1.16
TVP23B-204ENST00000571018 LINC00310P59036 64 aa7.78□□□□□ -1.16
TVP23B-204ENST00000571018 ODF1Q14990 250 aa7.78□□□□□ -1.16
TVP23B-204ENST00000571018 C1orf137Q5JT78 98 aa7.78□□□□□ -1.16
TVP23B-204ENST00000571018 TMEM170BQ5T4T1 132 aa7.78□□□□□ -1.16
TVP23B-204ENST00000571018 SERTAD4-AS1Q5TG53 156 aa7.78□□□□□ -1.16
TVP23B-204ENST00000571018 SERF1AO75920 110 aa7.77□□□□□ -1.17
TVP23B-204ENST00000571018 LRP1Q07954 4544 aaKnown RBP7.77□□□□□ -1.17
TVP23B-204ENST00000571018 UBE2BP63146 152 aa7.76□□□□□ -1.17
TVP23B-204ENST00000571018 REG3GQ6UW15 175 aa7.76□□□□□ -1.17
TVP23B-204ENST00000571018 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
TVP23B-204ENST00000571018 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
TVP23B-204ENST00000571018 LEPROTL1O95214 131 aa7.75□□□□□ -1.17
TVP23B-204ENST00000571018 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
TVP23B-204ENST00000571018 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
TVP23B-204ENST00000571018 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
TVP23B-204ENST00000571018 TMEM223A0PJW6 202 aa7.74□□□□□ -1.17
TVP23B-204ENST00000571018 NUPR1O60356 82 aa7.74□□□□□ -1.17
TVP23B-204ENST00000571018 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
TVP23B-204ENST00000571018 SFTA2Q6UW10 78 aa7.74□□□□□ -1.17
TVP23B-204ENST00000571018 KRTAP4-12Q9BQ66 201 aa7.74□□□□□ -1.17
TVP23B-204ENST00000571018 TP73-AS1Q9UF72 201 aa7.74□□□□□ -1.17
TVP23B-204ENST00000571018 TMA7Q9Y2S6 64 aaKnown RBP7.74□□□□□ -1.17
TVP23B-204ENST00000571018 SCO1O75880 301 aa7.73□□□□□ -1.17
TVP23B-204ENST00000571018 PFN2P35080 140 aa7.73□□□□□ -1.17
TVP23B-204ENST00000571018 COX17Q14061 63 aa7.73□□□□□ -1.17
TVP23B-204ENST00000571018 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
TVP23B-204ENST00000571018 ZNF625Q96I27 306 aaPredicted RBP7.73□□□□□ -1.17
TVP23B-204ENST00000571018 ERG28Q9UKR5 140 aa7.73□□□□□ -1.17
TVP23B-204ENST00000571018 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
TVP23B-204ENST00000571018 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
TVP23B-204ENST00000571018 IGLV5-37A0A075B6J1 123 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms