RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 GAGE5Q13069 117 aa7.45□□□□□ -1.22
CHRFAM7A-206ENST00000569278 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
CHRFAM7A-206ENST00000569278 AMMECR1LQ6DCA0 310 aa7.45□□□□□ -1.22
CHRFAM7A-206ENST00000569278 Q6ZVH6 145 aa7.45□□□□□ -1.22
CHRFAM7A-206ENST00000569278 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
CHRFAM7A-206ENST00000569278 GEMIN7Q9H840 131 aaKnown RBP7.45□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGKV2D-26A0A0A0MRZ7 120 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 J3QQQ9 107 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 LGALS3P17931 250 aaKnown RBP7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 UBE2D1P51668 147 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 BATFQ16520 125 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 SMIM13P0DJ93 91 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 WFDC2Q14508 124 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 MRPL23Q16540 153 aaKnown RBP7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 SFTA2Q6UW10 78 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 CEND1Q8N111 149 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 SPANXB1Q9NS25 103 aaPredicted RBP7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 TP73-AS1Q9UF72 201 aa7.43□□□□□ -1.22
CHRFAM7A-206ENST00000569278 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 A0A1B0GV90 55 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 ZNF22P17026 224 aaPredicted RBP7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 SCGB1D4Q6XE38 83 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 Q6ZSA8 131 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 Q9UF83 564 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 COX11Q9Y6N1 276 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 TNXBP22105 4242 aa7.42□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGHV3-38A0A0C4DH36 116 aa7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 GYPEP15421 78 aa7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
CHRFAM7A-206ENST00000569278 A0A0J9YXY3 114 aa7.4□□□□□ -1.22
CHRFAM7A-206ENST00000569278 PTTG1IPP53801 180 aa7.4□□□□□ -1.22
CHRFAM7A-206ENST00000569278 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHRFAM7A-206ENST00000569278 Q8N814 137 aa7.4□□□□□ -1.22
CHRFAM7A-206ENST00000569278 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.22
CHRFAM7A-206ENST00000569278 PPDPFQ9H3Y8 114 aa7.4□□□□□ -1.22
CHRFAM7A-206ENST00000569278 KRTAP29-1A8MX34 341 aaPredicted RBP7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 TMEM238C9JI98 176 aa7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 K7EP13 123 aa7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 TIMM17BO60830 172 aa7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 CIRBPQ14011 172 aaKnown RBP7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 LINC00469Q8N7U9 141 aa7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
CHRFAM7A-206ENST00000569278 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 C9orf118A6NHY6 69 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 IGHV3-30-3P0DP02 117 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 LRP2P98164 4655 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 LINC01556Q5JQF7 62 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 LINC00242Q5T6M2 205 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 KRTAP9-9Q9BYP9 154 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
CHRFAM7A-206ENST00000569278 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 IBA57-AS1B1ANH7 110 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 TAX1BP3O14907 124 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 IFITM1P13164 125 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 HERV-K104P63124 156 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 RPL24P83731 157 aaKnown RBP7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 Q6ZUT4 128 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 GTF2H5Q6ZYL4 71 aa7.37□□□□□ -1.23
CHRFAM7A-206ENST00000569278 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
CHRFAM7A-206ENST00000569278 C21orf62-AS1Q17RA5 79 aa7.36□□□□□ -1.23
CHRFAM7A-206ENST00000569278 C10orf126Q8N4M7 172 aa7.36□□□□□ -1.23
CHRFAM7A-206ENST00000569278 DEFB104AQ8WTQ1 72 aa7.36□□□□□ -1.23
CHRFAM7A-206ENST00000569278 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.35□□□□□ -1.23
CHRFAM7A-206ENST00000569278 SS18Q15532 418 aa7.35□□□□□ -1.23
CHRFAM7A-206ENST00000569278 LELP1Q5T871 98 aa7.35□□□□□ -1.23
CHRFAM7A-206ENST00000569278 Q9HAA7 133 aa7.35□□□□□ -1.23
CHRFAM7A-206ENST00000569278 CDKN2A-AS1Q9UH64 79 aa7.35□□□□□ -1.23
CHRFAM7A-206ENST00000569278 NDUFA12Q9UI09 145 aa7.35□□□□□ -1.23
CHRFAM7A-206ENST00000569278 TMEM262E9PQX1 116 aa7.34□□□□□ -1.23
CHRFAM7A-206ENST00000569278 NDUFA1O15239 70 aa7.34□□□□□ -1.23
CHRFAM7A-206ENST00000569278 VAMP3Q15836 100 aa7.34□□□□□ -1.23
CHRFAM7A-206ENST00000569278 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 GAGE6Q13070 117 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 LYRM7Q5U5X0 104 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 SCXQ7RTU7 201 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 SPANXDQ9BXN6 97 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 SPANXCQ9NY87 97 aa7.33□□□□□ -1.24
CHRFAM7A-206ENST00000569278 A0A087WZ39 114 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 PSCAO43653 123 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms