RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
CDH3-209ENST00000569080 GAGE2DQ9UEU5 116 aa4.77□□□□□ -1.65
CDH3-209ENST00000569080 A0A096LNJ9 63 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 SMIM1B2RUZ4 78 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 M0QXV9 152 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 MT-ND6P03923 174 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 S100PP25815 95 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 SEC11AP67812 179 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 C1orf137Q5JT78 98 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 PAPPA-AS1Q5QFB9 102 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 REG3GQ6UW15 175 aa4.76□□□□□ -1.65
CDH3-209ENST00000569080 MRPL18Q9H0U6 180 aaKnown RBP4.76□□□□□ -1.65
CDH3-209ENST00000569080 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
CDH3-209ENST00000569080 G0S2P27469 103 aa4.75□□□□□ -1.65
CDH3-209ENST00000569080 COX19Q49B96 90 aa4.75□□□□□ -1.65
CDH3-209ENST00000569080 URB1-AS1Q96HZ7 61 aa4.75□□□□□ -1.65
CDH3-209ENST00000569080 PACRGQ96M98 296 aaPredicted RBP4.75□□□□□ -1.65
CDH3-209ENST00000569080 SCGB3A1Q96QR1 104 aa4.75□□□□□ -1.65
CDH3-209ENST00000569080 TOMM7Q9P0U1 55 aa4.75□□□□□ -1.65
CDH3-209ENST00000569080 TINCRA0A1B0GVN0 87 aa4.74□□□□□ -1.65
CDH3-209ENST00000569080 F8VRH5 84 aa4.74□□□□□ -1.65
CDH3-209ENST00000569080 PRSS2P07478 247 aa4.74□□□□□ -1.65
CDH3-209ENST00000569080 LINC00469Q8N7U9 141 aa4.74□□□□□ -1.65
CDH3-209ENST00000569080 CST9LQ9H4G1 147 aa4.74□□□□□ -1.65
CDH3-209ENST00000569080 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
CDH3-209ENST00000569080 RPS10P5Q9NQ39 176 aa4.74□□□□□ -1.65
CDH3-209ENST00000569080 LINC01549A6NIU2 74 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 H0Y9J4 135 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 KRTAP1-4P0C5Y4 121 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 CXCL5P42830 114 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 CKS1BP61024 79 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 FABP9Q0Z7S8 132 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 PDZD11Q5EBL8 140 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 C6orf226Q5I0X4 101 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 C18orf32Q8TCD1 76 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 YPEL4Q96NS1 127 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 XAGE1AQ9HD64 81 aa4.73□□□□□ -1.65
CDH3-209ENST00000569080 LPAP08519 4548 aa4.72□□□□□ -1.65
CDH3-209ENST00000569080 PMVKQ15126 192 aa4.72□□□□□ -1.65
CDH3-209ENST00000569080 FA2HQ7L5A8 372 aa4.72□□□□□ -1.65
CDH3-209ENST00000569080 COX7B2Q8TF08 81 aa4.72□□□□□ -1.65
CDH3-209ENST00000569080 DIRC1Q969H9 104 aa4.72□□□□□ -1.65
CDH3-209ENST00000569080 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 SPINK8P0C7L1 97 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 IGLC3P0DOY3 106 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 UBE2BP63146 152 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 SMCO4Q9NRQ5 59 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 TP73-AS1Q9UF72 201 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
CDH3-209ENST00000569080 APOC3P02656 99 aa4.7□□□□□ -1.66
CDH3-209ENST00000569080 ZNF22P17026 224 aaPredicted RBP4.7□□□□□ -1.66
CDH3-209ENST00000569080 PMCHL1Q16048 86 aa4.7□□□□□ -1.66
CDH3-209ENST00000569080 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
CDH3-209ENST00000569080 TRAPPC1Q9Y5R8 145 aa4.7□□□□□ -1.66
CDH3-209ENST00000569080 IGLV5-37A0A075B6J1 123 aa4.69□□□□□ -1.66
CDH3-209ENST00000569080 HBDP02042 147 aa4.69□□□□□ -1.66
CDH3-209ENST00000569080 LINC00614P0C842 121 aa4.69□□□□□ -1.66
CDH3-209ENST00000569080 MRPL55Q7Z7F7 128 aaKnown RBP4.69□□□□□ -1.66
CDH3-209ENST00000569080 SVBPQ8N300 66 aa4.69□□□□□ -1.66
CDH3-209ENST00000569080 IGLV1-50A0A075B6I6 118 aa4.68□□□□□ -1.66
CDH3-209ENST00000569080 C11orf86A6NJI1 115 aa4.68□□□□□ -1.66
CDH3-209ENST00000569080 H3BRM9 83 aa4.68□□□□□ -1.66
CDH3-209ENST00000569080 NUPR1O60356 82 aa4.68□□□□□ -1.66
CDH3-209ENST00000569080 ZNF861PO60384 105 aa4.68□□□□□ -1.66
CDH3-209ENST00000569080 SNAPINO95295 136 aa4.68□□□□□ -1.66
CDH3-209ENST00000569080 NDUFA5Q16718 116 aa4.67□□□□□ -1.66
CDH3-209ENST00000569080 LBHQ53QV2 105 aaPredicted RBP4.67□□□□□ -1.66
CDH3-209ENST00000569080 KRTAP13-1Q8IUC0 172 aa4.67□□□□□ -1.66
CDH3-209ENST00000569080 BCE1O60756 84 aa4.66□□□□□ -1.66
CDH3-209ENST00000569080 ATP5LO75964 103 aa4.66□□□□□ -1.66
CDH3-209ENST00000569080 CBLN2Q8IUK8 224 aa4.66□□□□□ -1.66
CDH3-209ENST00000569080 Q8NDZ9 215 aa4.66□□□□□ -1.66
CDH3-209ENST00000569080 ZNF625Q96I27 306 aaPredicted RBP4.66□□□□□ -1.66
CDH3-209ENST00000569080 LINC00167Q96N53 147 aa4.66□□□□□ -1.66
CDH3-209ENST00000569080 RPL37AP8A6NKH3 93 aa4.65□□□□□ -1.67
CDH3-209ENST00000569080 SCO1O75880 301 aa4.65□□□□□ -1.67
CDH3-209ENST00000569080 VPREB1P12018 145 aa4.65□□□□□ -1.67
CDH3-209ENST00000569080 NDUFA6P56556 154 aa4.65□□□□□ -1.67
CDH3-209ENST00000569080 RAB5BP61020 215 aa4.65□□□□□ -1.67
CDH3-209ENST00000569080 CHCHD1Q96BP2 118 aaKnown RBP4.65□□□□□ -1.67
CDH3-209ENST00000569080 ERG28Q9UKR5 140 aa4.65□□□□□ -1.67
CDH3-209ENST00000569080 A0A087X002 238 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 TRAV12-1A0A0B4J245 112 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 GAGE10A6NGK3 116 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 PFN2P35080 140 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 LINC00310P59036 64 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 BAGE3Q86Y29 109 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 SND1-IT1Q9HBX3 110 aa4.64□□□□□ -1.67
CDH3-209ENST00000569080 TMEM223A0PJW6 202 aa4.63□□□□□ -1.67
CDH3-209ENST00000569080 RPL13AP40429 203 aaKnown RBP4.63□□□□□ -1.67
CDH3-209ENST00000569080 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
CDH3-209ENST00000569080 COX17Q14061 63 aa4.63□□□□□ -1.67
CDH3-209ENST00000569080 TMEM170BQ5T4T1 132 aa4.63□□□□□ -1.67
CDH3-209ENST00000569080 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
CDH3-209ENST00000569080 CHTOPQ9Y3Y2 248 aaKnown RBP4.63□□□□□ -1.67
CDH3-209ENST00000569080 IGKV2-28A0A075B6P5 120 aa4.62□□□□□ -1.67
CDH3-209ENST00000569080 IGKV2D-28P01615 120 aa4.62□□□□□ -1.67
CDH3-209ENST00000569080 SFTA2Q6UW10 78 aa4.62□□□□□ -1.67
CDH3-209ENST00000569080 NKAPP1Q8N9T2 125 aa4.62□□□□□ -1.67
CDH3-209ENST00000569080 MUC2Q02817 5179 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms