RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 DEFB134Q4QY38 66 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 SZT2Q5T011 3432 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 SDK1Q7Z5N4 2213 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 MALRD1Q5VYJ5 2156 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 C3orf84H3BNL1 204 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 IGHV3-53P01767 116 aa2.94□□□□□ -1.94
UBR1-208ENST00000569066 A0A0J9YX75 114 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 NNATQ16517 81 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 C10orf113Q5VZT2 155 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 MUC7Q8TAX7 377 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 RP1P56715 2156 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 SORL1Q92673 2214 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 TRBV6-1A0A0K0K1D8 114 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 NCR3O14931 201 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 LEPROTO15243 131 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 ERC2-IT1O76042 136 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 PRB1P04280 392 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 C9orf116Q5BN46 136 aaPredicted RBP2.93□□□□□ -1.94
UBR1-208ENST00000569066 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
UBR1-208ENST00000569066 PTPRQQ9UMZ3 2332 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 CEP350Q5VT06 3117 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 C19orf84I3L1E1 186 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 NREPQ16612 68 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 ZNF833PQ6ZTB9 187 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 SCXQ7RTU7 201 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 CNFNQ9BYD5 112 aa2.92□□□□□ -1.94
UBR1-208ENST00000569066 TNRC6BQ9UPQ9 1833 aaKnown RBP2.92□□□□□ -1.94
UBR1-208ENST00000569066 MUC22E2RYF6 1773 aaPredicted RBP2.91□□□□□ -1.94
UBR1-208ENST00000569066 IGHV3-64A0A075B6Q5 118 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 TRBV6-8A0A0A6YYG3 113 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 MIAQ16674 131 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 SMIM2Q9BVW6 85 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 TMEM14CQ9P0S9 112 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 HIGD2AQ9BW72 106 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 CDC42SE2Q9NRR3 84 aa2.91□□□□□ -1.94
UBR1-208ENST00000569066 F5P12259 2224 aa2.9□□□□□ -1.94
UBR1-208ENST00000569066 LECT2O14960 151 aa2.9□□□□□ -1.94
UBR1-208ENST00000569066 IGLV1-51P01701 117 aa2.9□□□□□ -1.94
UBR1-208ENST00000569066 C10orf128Q5T292 105 aa2.9□□□□□ -1.94
UBR1-208ENST00000569066 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
UBR1-208ENST00000569066 Q6ZTI0 123 aa2.9□□□□□ -1.95
UBR1-208ENST00000569066 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
UBR1-208ENST00000569066 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.95
UBR1-208ENST00000569066 ASCC3Q8N3C0 2202 aaKnown RBP2.9□□□□□ -1.95
UBR1-208ENST00000569066 TRAV21A0A0B4J279 112 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 SPANXN1Q5VSR9 72 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 Q8N814 137 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 COL4A2P08572 1712 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 ANKRD17O75179 2603 aaKnown RBP2.89□□□□□ -1.95
UBR1-208ENST00000569066 VPS13AQ96RL7 3174 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 ABCA4P78363 2273 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 PRB3Q04118 309 aaPredicted RBP2.89□□□□□ -1.95
UBR1-208ENST00000569066 Q8NAQ8 132 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 UBL5Q9BZL1 73 aa2.89□□□□□ -1.95
UBR1-208ENST00000569066 IGHV3-30-3P0DP02 117 aa2.88□□□□□ -1.95
UBR1-208ENST00000569066 LIMD2Q9BT23 127 aa2.88□□□□□ -1.95
UBR1-208ENST00000569066 KNL1Q8NG31 2342 aa2.88□□□□□ -1.95
UBR1-208ENST00000569066 IGKV2-24A0A0C4DH68 120 aa2.88□□□□□ -1.95
UBR1-208ENST00000569066 IGLV6-57P01721 117 aa2.88□□□□□ -1.95
UBR1-208ENST00000569066 SAA1P0DJI8 122 aaPredicted RBP2.88□□□□□ -1.95
UBR1-208ENST00000569066 C1orf134Q5TEV5 83 aa2.88□□□□□ -1.95
UBR1-208ENST00000569066 MRPL36Q9P0J6 103 aaKnown RBP2.88□□□□□ -1.95
UBR1-208ENST00000569066 VCANP13611 3396 aa2.87□□□□□ -1.95
UBR1-208ENST00000569066 RPL39P62891 51 aaKnown RBP2.87□□□□□ -1.95
UBR1-208ENST00000569066 LEAP2Q969E1 77 aa2.87□□□□□ -1.95
UBR1-208ENST00000569066 RANBP2P49792 3224 aaKnown RBP2.87□□□□□ -1.95
UBR1-208ENST00000569066 URB1O60287 2271 aaKnown RBP2.86□□□□□ -1.95
UBR1-208ENST00000569066 LOC101927531A0A1B0GV80 90 aa2.86□□□□□ -1.95
UBR1-208ENST00000569066 IGKV2-29A2NJV5 120 aaPredicted RBP2.86□□□□□ -1.95
UBR1-208ENST00000569066 CCL5P13501 91 aa2.86□□□□□ -1.95
UBR1-208ENST00000569066 RPL39LQ96EH5 51 aaKnown RBP2.86□□□□□ -1.95
UBR1-208ENST00000569066 TRBV10-1A0A0K0K1A3 114 aa2.86□□□□□ -1.95
UBR1-208ENST00000569066 HAMPP81172 84 aa2.86□□□□□ -1.95
UBR1-208ENST00000569066 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
UBR1-208ENST00000569066 DEFB104AQ8WTQ1 72 aa2.86□□□□□ -1.95
UBR1-208ENST00000569066 P0C880 135 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 LINC00308Q8TCZ7 52 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 CUL9Q8IWT3 2517 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 A0A1B0GU33 70 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 CLPSL1A2RUU4 121 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 DEFB108AA8MXU0 73 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 M0R2N4 97 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 ROMO1P60602 79 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 PRCDQ00LT1 54 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 ZFAND2AQ8N6M9 145 aa2.85□□□□□ -1.95
UBR1-208ENST00000569066 CFAP54Q96N23 3096 aa2.84□□□□□ -1.95
UBR1-208ENST00000569066 CLPSP04118 112 aa2.84□□□□□ -1.95
UBR1-208ENST00000569066 BRD3OSQ6XYD6 125 aa2.84□□□□□ -1.96
UBR1-208ENST00000569066 Q8TAT8 98 aa2.84□□□□□ -1.96
UBR1-208ENST00000569066 ZCCHC13Q8WW36 166 aaKnown RBP2.84□□□□□ -1.96
UBR1-208ENST00000569066 NDUFA4L2Q9NRX3 87 aa2.84□□□□□ -1.96
UBR1-208ENST00000569066 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.96
UBR1-208ENST00000569066 NBEAQ8NFP9 2946 aa2.83□□□□□ -1.96
UBR1-208ENST00000569066 A0A1W2PNM2 257 aa2.83□□□□□ -1.96
UBR1-208ENST00000569066 RPL39P5Q59GN2 51 aa2.83□□□□□ -1.96
UBR1-208ENST00000569066 CSAG1Q6PB30 78 aa2.83□□□□□ -1.96
UBR1-208ENST00000569066 CASC2Q6XLA1 102 aa2.83□□□□□ -1.96
UBR1-208ENST00000569066 MKI67P46013 3256 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms