RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 NDUFA5Q16718 116 aa9.27□□□□□ -0.93
HERPUD1-215ENST00000568676 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
HERPUD1-215ENST00000568676 C10orf91Q5T1B1 145 aa9.27□□□□□ -0.93
HERPUD1-215ENST00000568676 TRAV9-1A0A075B6T8 112 aa9.26□□□□□ -0.93
HERPUD1-215ENST00000568676 A0A087X002 238 aa9.26□□□□□ -0.93
HERPUD1-215ENST00000568676 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
HERPUD1-215ENST00000568676 S100PP25815 95 aa9.26□□□□□ -0.93
HERPUD1-215ENST00000568676 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
HERPUD1-215ENST00000568676 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
HERPUD1-215ENST00000568676 SEC11AP67812 179 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 CTAG1AP78358 180 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 RHEBQ15382 184 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 FAM19A3Q7Z5A8 133 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 TOMM7Q9P0U1 55 aa9.25□□□□□ -0.93
HERPUD1-215ENST00000568676 F8VRH5 84 aa9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 AMELXQ99217 191 aa9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 VCX2Q9H322 139 aa9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 XAGE1AQ9HD64 81 aa9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 CYSLTR1Q9Y271 337 aa9.24□□□□□ -0.93
HERPUD1-215ENST00000568676 CXCL5P42830 114 aa9.23□□□□□ -0.93
HERPUD1-215ENST00000568676 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
HERPUD1-215ENST00000568676 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
HERPUD1-215ENST00000568676 RPS10P5Q9NQ39 176 aa9.23□□□□□ -0.93
HERPUD1-215ENST00000568676 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 K7EMI3 77 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 APOC3P02656 99 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 HERVK_113P63121 156 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 PAPPA-AS1Q5QFB9 102 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 C2orf66Q6UXQ4 117 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 SVBPQ8N300 66 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
HERPUD1-215ENST00000568676 SNAPINO95295 136 aa9.21□□□□□ -0.94
HERPUD1-215ENST00000568676 COX19Q49B96 90 aa9.21□□□□□ -0.94
HERPUD1-215ENST00000568676 FAM229BQ4G0N7 80 aa9.21□□□□□ -0.94
HERPUD1-215ENST00000568676 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
HERPUD1-215ENST00000568676 LINC00173Q6ZV60 143 aa9.21□□□□□ -0.94
HERPUD1-215ENST00000568676 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
HERPUD1-215ENST00000568676 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
HERPUD1-215ENST00000568676 G0S2P27469 103 aa9.19□□□□□ -0.94
HERPUD1-215ENST00000568676 Q8N8P6 123 aa9.19□□□□□ -0.94
HERPUD1-215ENST00000568676 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
HERPUD1-215ENST00000568676 LINC00167Q96N53 147 aa9.18□□□□□ -0.94
HERPUD1-215ENST00000568676 GEMIN7Q9H840 131 aaKnown RBP9.18□□□□□ -0.94
HERPUD1-215ENST00000568676 LOC389332A0A1B0GUA5 103 aa9.17□□□□□ -0.94
HERPUD1-215ENST00000568676 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
HERPUD1-215ENST00000568676 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
HERPUD1-215ENST00000568676 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
HERPUD1-215ENST00000568676 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
HERPUD1-215ENST00000568676 UBE2AP49459 152 aa9.16□□□□□ -0.94
HERPUD1-215ENST00000568676 KRTAP13-2Q52LG2 175 aa9.16□□□□□ -0.94
HERPUD1-215ENST00000568676 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
HERPUD1-215ENST00000568676 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
HERPUD1-215ENST00000568676 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
HERPUD1-215ENST00000568676 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-215ENST00000568676 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
HERPUD1-215ENST00000568676 IGKV2D-26A0A0A0MRZ7 120 aa9.14□□□□□ -0.95
HERPUD1-215ENST00000568676 NKAPP1Q8N9T2 125 aa9.14□□□□□ -0.95
HERPUD1-215ENST00000568676 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
HERPUD1-215ENST00000568676 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
HERPUD1-215ENST00000568676 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
HERPUD1-215ENST00000568676 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
HERPUD1-215ENST00000568676 GAGE10A6NGK3 116 aa9.11□□□□□ -0.95
HERPUD1-215ENST00000568676 SMIM1B2RUZ4 78 aa9.11□□□□□ -0.95
HERPUD1-215ENST00000568676 FABP9Q0Z7S8 132 aa9.11□□□□□ -0.95
HERPUD1-215ENST00000568676 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
HERPUD1-215ENST00000568676 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
HERPUD1-215ENST00000568676 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-215ENST00000568676 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
HERPUD1-215ENST00000568676 TINCRA0A1B0GVN0 87 aa9.09□□□□□ -0.95
HERPUD1-215ENST00000568676 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
HERPUD1-215ENST00000568676 ERASQ7Z444 233 aa9.09□□□□□ -0.95
HERPUD1-215ENST00000568676 SLC7A5P1Q8MH63 180 aa9.09□□□□□ -0.95
HERPUD1-215ENST00000568676 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
HERPUD1-215ENST00000568676 IGLV5-45A0A087WSX0 123 aa9.08□□□□□ -0.96
HERPUD1-215ENST00000568676 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
HERPUD1-215ENST00000568676 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
HERPUD1-215ENST00000568676 PPDPFQ9H3Y8 114 aa9.07□□□□□ -0.96
HERPUD1-215ENST00000568676 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
HERPUD1-215ENST00000568676 IGKV2-28A0A075B6P5 120 aa9.06□□□□□ -0.96
HERPUD1-215ENST00000568676 IGKV2D-28P01615 120 aa9.06□□□□□ -0.96
HERPUD1-215ENST00000568676 FP248Q71RG6 208 aaPredicted RBP9.06□□□□□ -0.96
HERPUD1-215ENST00000568676 ATP5LO75964 103 aa9.05□□□□□ -0.96
HERPUD1-215ENST00000568676 RAB5BP61020 215 aa9.05□□□□□ -0.96
HERPUD1-215ENST00000568676 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
HERPUD1-215ENST00000568676 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
HERPUD1-215ENST00000568676 FAM19A1Q7Z5A9 133 aa9.04□□□□□ -0.96
HERPUD1-215ENST00000568676 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
HERPUD1-215ENST00000568676 PRLHP81277 87 aa9.03□□□□□ -0.96
HERPUD1-215ENST00000568676 H3BRM9 83 aa9.02□□□□□ -0.97
HERPUD1-215ENST00000568676 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-215ENST00000568676 PLEKHB2Q96CS7 222 aa9.02□□□□□ -0.97
HERPUD1-215ENST00000568676 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
HERPUD1-215ENST00000568676 CBLN2Q8IUK8 224 aa9.01□□□□□ -0.97
HERPUD1-215ENST00000568676 YPEL4Q96NS1 127 aa9.01□□□□□ -0.97
HERPUD1-215ENST00000568676 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms