RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
PALB2-206ENST00000568219 IGLV4-60A0A075B6I1 120 aa7.79□□□□□ -1.16
PALB2-206ENST00000568219 TRBV10-1A0A0K0K1A3 114 aa7.79□□□□□ -1.16
PALB2-206ENST00000568219 DEFB105AQ8NG35 78 aa7.79□□□□□ -1.16
PALB2-206ENST00000568219 C9orf116Q5BN46 136 aaPredicted RBP7.78□□□□□ -1.16
PALB2-206ENST00000568219 TMEM89A2RUT3 159 aa7.78□□□□□ -1.16
PALB2-206ENST00000568219 IBA57-AS1B1ANH7 110 aa7.78□□□□□ -1.16
PALB2-206ENST00000568219 DOPEY1Q5JWR5 2465 aa7.78□□□□□ -1.16
PALB2-206ENST00000568219 DEFB121Q5J5C9 76 aa7.78□□□□□ -1.16
PALB2-206ENST00000568219 Q96MF0 132 aa7.78□□□□□ -1.16
PALB2-206ENST00000568219 NTM-AS1Q6ZSK4 140 aa7.77□□□□□ -1.17
PALB2-206ENST00000568219 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
PALB2-206ENST00000568219 DEFB114Q30KQ6 69 aa7.77□□□□□ -1.17
PALB2-206ENST00000568219 CCKP06307 115 aa7.77□□□□□ -1.17
PALB2-206ENST00000568219 DCHS2Q6V1P9 2916 aa7.76□□□□□ -1.17
PALB2-206ENST00000568219 NDUFC2O95298 119 aa7.76□□□□□ -1.17
PALB2-206ENST00000568219 F8WEM9 126 aa7.76□□□□□ -1.17
PALB2-206ENST00000568219 CCL24O00175 119 aa7.76□□□□□ -1.17
PALB2-206ENST00000568219 XAGE1AQ9HD64 81 aa7.76□□□□□ -1.17
PALB2-206ENST00000568219 Q6ZQY7 126 aa7.75□□□□□ -1.17
PALB2-206ENST00000568219 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
PALB2-206ENST00000568219 RMI2Q96E14 147 aa7.75□□□□□ -1.17
PALB2-206ENST00000568219 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
PALB2-206ENST00000568219 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
PALB2-206ENST00000568219 FHL2Q14192 279 aa7.75□□□□□ -1.17
PALB2-206ENST00000568219 LRCOL1A6NCL2 159 aa7.74□□□□□ -1.17
PALB2-206ENST00000568219 IGKV2-28A0A075B6P5 120 aa7.74□□□□□ -1.17
PALB2-206ENST00000568219 IGKV2D-28P01615 120 aa7.74□□□□□ -1.17
PALB2-206ENST00000568219 GCN1Q92616 2671 aaKnown RBP7.74□□□□□ -1.17
PALB2-206ENST00000568219 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
PALB2-206ENST00000568219 C1orf158Q8N1D5 194 aa7.73□□□□□ -1.17
PALB2-206ENST00000568219 Q8N814 137 aa7.73□□□□□ -1.17
PALB2-206ENST00000568219 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
PALB2-206ENST00000568219 CELSR1Q9NYQ6 3014 aa7.72□□□□□ -1.17
PALB2-206ENST00000568219 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.17
PALB2-206ENST00000568219 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.17
PALB2-206ENST00000568219 C16orf74Q96GX8 76 aa7.71□□□□□ -1.17
PALB2-206ENST00000568219 NREPQ16612 68 aa7.71□□□□□ -1.18
PALB2-206ENST00000568219 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
PALB2-206ENST00000568219 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
PALB2-206ENST00000568219 FAM104AQ969W3 186 aa7.7□□□□□ -1.18
PALB2-206ENST00000568219 ZNF561-AS1K7EIQ3 104 aa7.7□□□□□ -1.18
PALB2-206ENST00000568219 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
PALB2-206ENST00000568219 Q8N3U1 123 aa7.7□□□□□ -1.18
PALB2-206ENST00000568219 ZANQ9Y493 2812 aa7.7□□□□□ -1.18
PALB2-206ENST00000568219 PRR4Q16378 134 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 KLK12Q9UKR0 248 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 ZNF843Q8N446 348 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 PRORYQ9H606 182 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 DSCR9P59020 149 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 CHCHD10Q8WYQ3 142 aaPredicted RBP7.69□□□□□ -1.18
PALB2-206ENST00000568219 ZNF702PQ9H963 129 aa7.69□□□□□ -1.18
PALB2-206ENST00000568219 C3orf84H3BNL1 204 aa7.68□□□□□ -1.18
PALB2-206ENST00000568219 Q8N9L7 120 aa7.68□□□□□ -1.18
PALB2-206ENST00000568219 BEAN1Q3B7T3 259 aa7.68□□□□□ -1.18
PALB2-206ENST00000568219 A0A087WZ39 114 aa7.67□□□□□ -1.18
PALB2-206ENST00000568219 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
PALB2-206ENST00000568219 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 NDUFC2-KCTD14E9PQ53 114 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 REG3AQ06141 175 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 HIGD2BQ4VC39 106 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 BBC3Q96PG8 261 aaPredicted RBP7.66□□□□□ -1.18
PALB2-206ENST00000568219 FLNCQ14315 2725 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 C4orf3Q8WVX3 66 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 SERP1Q9Y6X1 66 aa7.66□□□□□ -1.18
PALB2-206ENST00000568219 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
PALB2-206ENST00000568219 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
PALB2-206ENST00000568219 KLK9Q2XQG4 91 aa7.65□□□□□ -1.18
PALB2-206ENST00000568219 CELA1Q9UNI1 258 aa7.65□□□□□ -1.18
PALB2-206ENST00000568219 Q6ZVQ6 151 aa7.65□□□□□ -1.19
PALB2-206ENST00000568219 MIFP14174 115 aa7.64□□□□□ -1.19
PALB2-206ENST00000568219 CMC4P56277 68 aaPredicted RBP7.64□□□□□ -1.19
PALB2-206ENST00000568219 C6orf223Q8N319 242 aa7.64□□□□□ -1.19
PALB2-206ENST00000568219 J3QLI3 93 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 Q6YL49 198 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 LINC00336Q6ZUF6 198 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 CAMK2N2Q96S95 79 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 BPY2O14599 106 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 FUSP35637 526 aaKnown RBP eCLIP7.63□□□□□ -1.19
PALB2-206ENST00000568219 DEFB135Q30KP9 77 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 PRO0255Q9UI72 69 aa7.63□□□□□ -1.19
PALB2-206ENST00000568219 COX7BP24311 80 aa7.62□□□□□ -1.19
PALB2-206ENST00000568219 LINC01006Q8NI28 216 aa7.62□□□□□ -1.19
PALB2-206ENST00000568219 HRNRQ86YZ3 2850 aaPredicted RBP7.62□□□□□ -1.19
PALB2-206ENST00000568219 LINC00474Q9P2X8 69 aa7.62□□□□□ -1.19
PALB2-206ENST00000568219 USP24Q9UPU5 2620 aa7.62□□□□□ -1.19
PALB2-206ENST00000568219 TEX15Q9BXT5 2789 aa7.62□□□□□ -1.19
PALB2-206ENST00000568219 LINC01600Q96MT4 127 aa7.61□□□□□ -1.19
PALB2-206ENST00000568219 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
PALB2-206ENST00000568219 FBN2P35556 2912 aa7.61□□□□□ -1.19
PALB2-206ENST00000568219 C1orf195Q5TG92 126 aa7.61□□□□□ -1.19
PALB2-206ENST00000568219 Q8IZM0 81 aa7.61□□□□□ -1.19
PALB2-206ENST00000568219 TM2D3Q9BRN9 247 aa7.61□□□□□ -1.19
PALB2-206ENST00000568219 CRYBG3Q68DQ2 2970 aa7.6□□□□□ -1.19
PALB2-206ENST00000568219 NKAPP1Q8N9T2 125 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms