RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 GAGE2DQ9UEU5 116 aa7.11□□□□□ -1.27
TCF4-236ENST00000567880 KLK12Q9UKR0 248 aa7.11□□□□□ -1.27
TCF4-236ENST00000567880 IGKV2D-26A0A0A0MRZ7 120 aa7.11□□□□□ -1.27
TCF4-236ENST00000567880 H3BMG7 143 aa7.11□□□□□ -1.27
TCF4-236ENST00000567880 APOMO95445 188 aa7.11□□□□□ -1.27
TCF4-236ENST00000567880 FOXI1Q12951 378 aa7.1□□□□□ -1.27
TCF4-236ENST00000567880 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 REG3AQ06141 175 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 LINC00242Q5T6M2 205 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 LINC00959A0A1B0GUT2 108 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 ZNF22P17026 224 aaPredicted RBP7.09□□□□□ -1.27
TCF4-236ENST00000567880 COX6A2Q02221 97 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 MUC7Q8TAX7 377 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 ERG28Q9UKR5 140 aa7.09□□□□□ -1.27
TCF4-236ENST00000567880 IGLV10-54A0A075B6I4 117 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 CRPP02741 224 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 SPINK8P0C7L1 97 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 HERVK_113P63121 156 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 LYSTQ99698 3801 aa7.08□□□□□ -1.28
TCF4-236ENST00000567880 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
TCF4-236ENST00000567880 IGHV3-64A0A075B6Q5 118 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 XCL1P47992 114 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 SS18Q15532 418 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 UBE2WQ96B02 151 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 CDKN2A-AS1Q9UH64 79 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
TCF4-236ENST00000567880 HERVK_113P61574 105 aa7.06□□□□□ -1.28
TCF4-236ENST00000567880 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
TCF4-236ENST00000567880 FAM19A3Q7Z5A8 133 aa7.06□□□□□ -1.28
TCF4-236ENST00000567880 PPDPFLQ8WWR9 84 aa7.06□□□□□ -1.28
TCF4-236ENST00000567880 UPK3BQ9BT76 320 aa7.06□□□□□ -1.28
TCF4-236ENST00000567880 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
TCF4-236ENST00000567880 PRR34Q9NV39 138 aa7.05□□□□□ -1.28
TCF4-236ENST00000567880 TRAV8-3A0A0A6YYJ7 113 aa7.05□□□□□ -1.28
TCF4-236ENST00000567880 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
TCF4-236ENST00000567880 TTTY13Q9BZ97 58 aa7.05□□□□□ -1.28
TCF4-236ENST00000567880 PLECQ15149 4684 aaKnown RBP7.04□□□□□ -1.28
TCF4-236ENST00000567880 IGLV5-45A0A087WSX0 123 aa7.04□□□□□ -1.28
TCF4-236ENST00000567880 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
TCF4-236ENST00000567880 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
TCF4-236ENST00000567880 TEN1Q86WV5 123 aa7.04□□□□□ -1.28
TCF4-236ENST00000567880 MAPKAPK5-AS1Q8N8E1 139 aa7.04□□□□□ -1.28
TCF4-236ENST00000567880 Q9HAA7 133 aa7.04□□□□□ -1.28
TCF4-236ENST00000567880 TRBV20-1A0A075B6N2 111 aa7.03□□□□□ -1.28
TCF4-236ENST00000567880 IGHV3OR16-9A0A0B4J2B5 98 aa7.03□□□□□ -1.28
TCF4-236ENST00000567880 MIAQ16674 131 aa7.03□□□□□ -1.28
TCF4-236ENST00000567880 MT-ATP8P03928 68 aa7.02□□□□□ -1.29
TCF4-236ENST00000567880 XGP55808 180 aa7.02□□□□□ -1.29
TCF4-236ENST00000567880 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
TCF4-236ENST00000567880 ANAPC13Q9BS18 74 aa7.02□□□□□ -1.29
TCF4-236ENST00000567880 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 IGHV1-58A0A0C4DH39 117 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 SMIM1B2RUZ4 78 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 C10orf126Q8N4M7 172 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 A0A087WZ39 114 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 J3QQQ9 107 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 LEPROTO15243 131 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 LGALS3P17931 250 aaKnown RBP7.01□□□□□ -1.29
TCF4-236ENST00000567880 CASC10Q5T4H9 136 aa7.01□□□□□ -1.29
TCF4-236ENST00000567880 IBA57-AS1B1ANH7 110 aa7□□□□□ -1.29
TCF4-236ENST00000567880 COX7A2LO14548 114 aa7□□□□□ -1.29
TCF4-236ENST00000567880 RPL13AP40429 203 aaKnown RBP7□□□□□ -1.29
TCF4-236ENST00000567880 Q75L30 129 aa7□□□□□ -1.29
TCF4-236ENST00000567880 PLEKHB2Q96CS7 222 aa7□□□□□ -1.29
TCF4-236ENST00000567880 TOMM7Q9P0U1 55 aa7□□□□□ -1.29
TCF4-236ENST00000567880 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
TCF4-236ENST00000567880 V9GYY9 64 aa6.99□□□□□ -1.29
TCF4-236ENST00000567880 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
TCF4-236ENST00000567880 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
TCF4-236ENST00000567880 IGLV5-39A0A0G2JS06 123 aa6.98□□□□□ -1.29
TCF4-236ENST00000567880 PSMB2P49721 201 aa6.98□□□□□ -1.29
TCF4-236ENST00000567880 Q6Q795 121 aa6.98□□□□□ -1.29
TCF4-236ENST00000567880 C3orf84H3BNL1 204 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 LY6G6CO95867 125 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 COX7B2Q8TF08 81 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
TCF4-236ENST00000567880 NBDYA0A0U1RRE5 68 aa6.96□□□□□ -1.3
TCF4-236ENST00000567880 M0R2N4 97 aa6.96□□□□□ -1.3
TCF4-236ENST00000567880 PRSS2P07478 247 aa6.96□□□□□ -1.3
TCF4-236ENST00000567880 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
TCF4-236ENST00000567880 SS18L2Q9UHA2 77 aa6.96□□□□□ -1.3
TCF4-236ENST00000567880 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.3
TCF4-236ENST00000567880 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
TCF4-236ENST00000567880 TTC32Q5I0X7 151 aa6.95□□□□□ -1.3
TCF4-236ENST00000567880 RMI2Q96E14 147 aa6.95□□□□□ -1.3
TCF4-236ENST00000567880 LINC01600Q96MT4 127 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms