RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
SMPD3-210ENST00000567811 CDKN2A-AS1Q9UH64 79 aa4.45□□□□□ -1.7
SMPD3-210ENST00000567811 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
SMPD3-210ENST00000567811 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 APOC3P02656 99 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 LINC00614P0C842 121 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 REG3GQ6UW15 175 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
SMPD3-210ENST00000567811 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 NDUFC2-KCTD14E9PQ53 114 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 SNAPINO95295 136 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 PMVKQ15126 192 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 NDUFA5Q16718 116 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 Q8IZM0 81 aa4.43□□□□□ -1.7
SMPD3-210ENST00000567811 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
SMPD3-210ENST00000567811 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
SMPD3-210ENST00000567811 SVBPQ8N300 66 aa4.42□□□□□ -1.7
SMPD3-210ENST00000567811 LINC00469Q8N7U9 141 aa4.42□□□□□ -1.7
SMPD3-210ENST00000567811 F8VRH5 84 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 CXCL5P42830 114 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 NDUFA6P56556 154 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 RAB5BP61020 215 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 C9orf129Q5T035 196 aaKnown RBP4.41□□□□□ -1.7
SMPD3-210ENST00000567811 FAM19A5Q7Z5A7 132 aaPredicted RBP4.41□□□□□ -1.7
SMPD3-210ENST00000567811 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 C18orf32Q8TCD1 76 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 COX7B2Q8TF08 81 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 PLA2G2DQ9UNK4 145 aa4.41□□□□□ -1.7
SMPD3-210ENST00000567811 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.71
SMPD3-210ENST00000567811 A6NJY4 79 aa4.4□□□□□ -1.71
SMPD3-210ENST00000567811 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.71
SMPD3-210ENST00000567811 H3BRM9 83 aa4.4□□□□□ -1.71
SMPD3-210ENST00000567811 IGLV7-43P04211 117 aa4.4□□□□□ -1.71
SMPD3-210ENST00000567811 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
SMPD3-210ENST00000567811 M0QXV9 152 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 ATP5LO75964 103 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 HBDP02042 147 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 SPINK8P0C7L1 97 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 UBE2BP63146 152 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 LBHQ53QV2 105 aaPredicted RBP4.39□□□□□ -1.71
SMPD3-210ENST00000567811 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 DIRC1Q969H9 104 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 XAGE1AQ9HD64 81 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 C22orf24Q9Y442 160 aa4.39□□□□□ -1.71
SMPD3-210ENST00000567811 A0A096LNJ9 63 aa4.38□□□□□ -1.71
SMPD3-210ENST00000567811 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
SMPD3-210ENST00000567811 PMCHL1Q16048 86 aa4.38□□□□□ -1.71
SMPD3-210ENST00000567811 BAGE3Q86Y29 109 aa4.38□□□□□ -1.71
SMPD3-210ENST00000567811 TMEM238LA0A1B0GVL6 79 aa4.37□□□□□ -1.71
SMPD3-210ENST00000567811 ODF1Q14990 250 aa4.37□□□□□ -1.71
SMPD3-210ENST00000567811 YPEL4Q96NS1 127 aa4.37□□□□□ -1.71
SMPD3-210ENST00000567811 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
SMPD3-210ENST00000567811 MRPL55Q7Z7F7 128 aaKnown RBP4.36□□□□□ -1.71
SMPD3-210ENST00000567811 CHCHD1Q96BP2 118 aaKnown RBP4.36□□□□□ -1.71
SMPD3-210ENST00000567811 TP73-AS1Q9UF72 201 aa4.36□□□□□ -1.71
SMPD3-210ENST00000567811 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 H0Y9J4 135 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 NUPR1O60356 82 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 ZNF861PO60384 105 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 PFN2P35080 140 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 COX17Q14061 63 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
SMPD3-210ENST00000567811 CHTOPQ9Y3Y2 248 aaKnown RBP4.35□□□□□ -1.71
SMPD3-210ENST00000567811 C11orf86A6NJI1 115 aa4.34□□□□□ -1.71
SMPD3-210ENST00000567811 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
SMPD3-210ENST00000567811 SLC7A5P1Q8MH63 180 aa4.34□□□□□ -1.71
SMPD3-210ENST00000567811 PRR26Q8N8Z3 221 aa4.34□□□□□ -1.71
SMPD3-210ENST00000567811 IFI27L1Q96BM0 104 aa4.34□□□□□ -1.71
SMPD3-210ENST00000567811 TNXBP22105 4242 aa4.34□□□□□ -1.71
SMPD3-210ENST00000567811 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 HSBP1O75506 76 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 TRGC2P03986 189 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 FAM19A2Q8N3H0 131 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
SMPD3-210ENST00000567811 ERG28Q9UKR5 140 aa4.33□□□□□ -1.72
SMPD3-210ENST00000567811 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
SMPD3-210ENST00000567811 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
SMPD3-210ENST00000567811 GAGE10A6NGK3 116 aa4.32□□□□□ -1.72
SMPD3-210ENST00000567811 RPL28P46779 137 aaKnown RBP4.32□□□□□ -1.72
SMPD3-210ENST00000567811 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
SMPD3-210ENST00000567811 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
SMPD3-210ENST00000567811 CBLN2Q8IUK8 224 aa4.32□□□□□ -1.72
SMPD3-210ENST00000567811 SND1-IT1Q9HBX3 110 aa4.32□□□□□ -1.72
SMPD3-210ENST00000567811 BCE1O60756 84 aa4.31□□□□□ -1.72
SMPD3-210ENST00000567811 ATP6V1G1O75348 118 aa4.31□□□□□ -1.72
SMPD3-210ENST00000567811 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
SMPD3-210ENST00000567811 LINC00158P58513 81 aa4.31□□□□□ -1.72
SMPD3-210ENST00000567811 COLCA2A8K830 154 aa4.3□□□□□ -1.72
SMPD3-210ENST00000567811 LEPROTL1O95214 131 aa4.3□□□□□ -1.72
SMPD3-210ENST00000567811 RPL13AP40429 203 aaKnown RBP4.3□□□□□ -1.72
SMPD3-210ENST00000567811 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
SMPD3-210ENST00000567811 LINC00587B1AMM8 73 aa4.29□□□□□ -1.72
SMPD3-210ENST00000567811 SCO1O75880 301 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms