RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 VCX2Q9H322 139 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 PAPPA-AS1Q5QFB9 102 aa8.73□□□□□ -1.01
COMMD4-216ENST00000567023 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
COMMD4-216ENST00000567023 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
COMMD4-216ENST00000567023 A0A096LNJ9 63 aa8.71□□□□□ -1.02
COMMD4-216ENST00000567023 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
COMMD4-216ENST00000567023 LINC00614P0C842 121 aa8.71□□□□□ -1.02
COMMD4-216ENST00000567023 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
COMMD4-216ENST00000567023 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
COMMD4-216ENST00000567023 ODF1Q14990 250 aa8.7□□□□□ -1.02
COMMD4-216ENST00000567023 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
COMMD4-216ENST00000567023 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
COMMD4-216ENST00000567023 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
COMMD4-216ENST00000567023 RAB5BP61020 215 aa8.69□□□□□ -1.02
COMMD4-216ENST00000567023 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
COMMD4-216ENST00000567023 SEC11AP67812 179 aa8.68□□□□□ -1.02
COMMD4-216ENST00000567023 GAGE2EQ4V326 116 aa8.68□□□□□ -1.02
COMMD4-216ENST00000567023 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
COMMD4-216ENST00000567023 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
COMMD4-216ENST00000567023 GAGE2DQ9UEU5 116 aa8.68□□□□□ -1.02
COMMD4-216ENST00000567023 COLCA2A8K830 154 aa8.67□□□□□ -1.02
COMMD4-216ENST00000567023 HBDP02042 147 aa8.67□□□□□ -1.02
COMMD4-216ENST00000567023 HERVK_113P63121 156 aa8.67□□□□□ -1.02
COMMD4-216ENST00000567023 DIRC1Q969H9 104 aa8.67□□□□□ -1.02
COMMD4-216ENST00000567023 PACRGQ96M98 296 aaPredicted RBP8.67□□□□□ -1.02
COMMD4-216ENST00000567023 CST9LQ9H4G1 147 aa8.67□□□□□ -1.02
COMMD4-216ENST00000567023 TRGC2P03986 189 aa8.66□□□□□ -1.02
COMMD4-216ENST00000567023 PMVKQ15126 192 aa8.66□□□□□ -1.02
COMMD4-216ENST00000567023 PDZD11Q5EBL8 140 aa8.66□□□□□ -1.02
COMMD4-216ENST00000567023 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
COMMD4-216ENST00000567023 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
COMMD4-216ENST00000567023 PMCHL1Q16048 86 aa8.65□□□□□ -1.02
COMMD4-216ENST00000567023 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
COMMD4-216ENST00000567023 Q8IZM0 81 aa8.65□□□□□ -1.02
COMMD4-216ENST00000567023 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.02
COMMD4-216ENST00000567023 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.02
COMMD4-216ENST00000567023 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
COMMD4-216ENST00000567023 M0QXV9 152 aa8.64□□□□□ -1.03
COMMD4-216ENST00000567023 PRSS2P07478 247 aa8.64□□□□□ -1.03
COMMD4-216ENST00000567023 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
COMMD4-216ENST00000567023 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
COMMD4-216ENST00000567023 H0Y9J4 135 aa8.63□□□□□ -1.03
COMMD4-216ENST00000567023 CKS1BP61024 79 aa8.63□□□□□ -1.03
COMMD4-216ENST00000567023 ATP5LO75964 103 aa8.62□□□□□ -1.03
COMMD4-216ENST00000567023 TOMM7Q9P0U1 55 aa8.62□□□□□ -1.03
COMMD4-216ENST00000567023 UBE2BP63146 152 aa8.61□□□□□ -1.03
COMMD4-216ENST00000567023 LINC00469Q8N7U9 141 aa8.61□□□□□ -1.03
COMMD4-216ENST00000567023 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 F8VRH5 84 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 SCO1O75880 301 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 LINC00310P59036 64 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 BAGE3Q86Y29 109 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
COMMD4-216ENST00000567023 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
COMMD4-216ENST00000567023 LPAP08519 4548 aa8.58□□□□□ -1.04
COMMD4-216ENST00000567023 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
COMMD4-216ENST00000567023 HSBP1O75506 76 aa8.58□□□□□ -1.04
COMMD4-216ENST00000567023 CXCL5P42830 114 aa8.58□□□□□ -1.04
COMMD4-216ENST00000567023 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
COMMD4-216ENST00000567023 SERF1AO75920 110 aa8.57□□□□□ -1.04
COMMD4-216ENST00000567023 NDUFA6P56556 154 aa8.57□□□□□ -1.04
COMMD4-216ENST00000567023 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
COMMD4-216ENST00000567023 NUPR1O60356 82 aa8.56□□□□□ -1.04
COMMD4-216ENST00000567023 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
COMMD4-216ENST00000567023 FAM19A2Q8N3H0 131 aa8.56□□□□□ -1.04
COMMD4-216ENST00000567023 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
COMMD4-216ENST00000567023 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
COMMD4-216ENST00000567023 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
COMMD4-216ENST00000567023 H3BRM9 83 aa8.55□□□□□ -1.04
COMMD4-216ENST00000567023 ZNF861PO60384 105 aa8.55□□□□□ -1.04
COMMD4-216ENST00000567023 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
COMMD4-216ENST00000567023 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
COMMD4-216ENST00000567023 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
COMMD4-216ENST00000567023 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
COMMD4-216ENST00000567023 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
COMMD4-216ENST00000567023 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
COMMD4-216ENST00000567023 CHTOPQ9Y3Y2 248 aaKnown RBP8.53□□□□□ -1.04
COMMD4-216ENST00000567023 HIST1H2BKO60814 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BJP06899 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BOP23527 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BBP33778 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BDP58876 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BCP62807 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST2H2BEQ16778 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BHQ93079 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BNQ99877 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 HIST1H2BMQ99879 126 aa8.52□□□□□ -1.05
COMMD4-216ENST00000567023 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
COMMD4-216ENST00000567023 BCE1O60756 84 aa8.49□□□□□ -1.05
COMMD4-216ENST00000567023 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
COMMD4-216ENST00000567023 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
COMMD4-216ENST00000567023 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
COMMD4-216ENST00000567023 HSPB8Q9UJY1 196 aa8.48□□□□□ -1.05
COMMD4-216ENST00000567023 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
COMMD4-216ENST00000567023 S100A1P23297 94 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms