RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
CMTM3-213ENST00000566756 NHLRC4P0CG21 123 aaPredicted RBP11.69□□□□□ -0.54
CMTM3-213ENST00000566756 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
CMTM3-213ENST00000566756 BAALC-AS2P0C853 105 aa11.68□□□□□ -0.54
CMTM3-213ENST00000566756 IGKV2-28A0A075B6P5 120 aa11.68□□□□□ -0.54
CMTM3-213ENST00000566756 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
CMTM3-213ENST00000566756 IGKV2D-28P01615 120 aa11.68□□□□□ -0.54
CMTM3-213ENST00000566756 LINC00337Q8N6G1 96 aa11.68□□□□□ -0.54
CMTM3-213ENST00000566756 IMUPQ9GZP8 106 aa11.68□□□□□ -0.54
CMTM3-213ENST00000566756 TOMM7Q9P0U1 55 aa11.67□□□□□ -0.54
CMTM3-213ENST00000566756 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
CMTM3-213ENST00000566756 H0YGX0 51 aa11.67□□□□□ -0.54
CMTM3-213ENST00000566756 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
CMTM3-213ENST00000566756 LINC00158P58513 81 aa11.67□□□□□ -0.54
CMTM3-213ENST00000566756 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
CMTM3-213ENST00000566756 CCL18P55774 89 aa11.65□□□□□ -0.54
CMTM3-213ENST00000566756 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.54
CMTM3-213ENST00000566756 SS18Q15532 418 aa11.65□□□□□ -0.55
CMTM3-213ENST00000566756 C22orf24Q9Y442 160 aa11.65□□□□□ -0.55
CMTM3-213ENST00000566756 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
CMTM3-213ENST00000566756 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
CMTM3-213ENST00000566756 Q8IZM0 81 aa11.63□□□□□ -0.55
CMTM3-213ENST00000566756 SMIM11BQ8TCY0 68 aa11.63□□□□□ -0.55
CMTM3-213ENST00000566756 GYPEP15421 78 aa11.62□□□□□ -0.55
CMTM3-213ENST00000566756 MALP21145 153 aa11.62□□□□□ -0.55
CMTM3-213ENST00000566756 LINC00643Q86TS7 51 aa11.62□□□□□ -0.55
CMTM3-213ENST00000566756 PRO0255Q9UI72 69 aa11.62□□□□□ -0.55
CMTM3-213ENST00000566756 DEFB130BP0DP73 79 aa11.61□□□□□ -0.55
CMTM3-213ENST00000566756 DEFB130AP0DP74 79 aa11.61□□□□□ -0.55
CMTM3-213ENST00000566756 C5orf38Q86SI9 138 aa11.61□□□□□ -0.55
CMTM3-213ENST00000566756 X6R8D5 127 aa11.61□□□□□ -0.55
CMTM3-213ENST00000566756 DNAL4O96015 105 aa11.6□□□□□ -0.55
CMTM3-213ENST00000566756 C6orf226Q5I0X4 101 aa11.6□□□□□ -0.55
CMTM3-213ENST00000566756 LYRM9A8MSI8 78 aa11.59□□□□□ -0.55
CMTM3-213ENST00000566756 APOC4P55056 127 aa11.58□□□□□ -0.56
CMTM3-213ENST00000566756 TRRAPQ9Y4A5 3859 aa11.57□□□□□ -0.56
CMTM3-213ENST00000566756 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
CMTM3-213ENST00000566756 PFN2P35080 140 aa11.57□□□□□ -0.56
CMTM3-213ENST00000566756 PAX4O43316 350 aa11.56□□□□□ -0.56
CMTM3-213ENST00000566756 CXCL5P42830 114 aa11.56□□□□□ -0.56
CMTM3-213ENST00000566756 OBSCN-AS1Q96MR7 158 aa11.56□□□□□ -0.56
CMTM3-213ENST00000566756 STAB1Q9NY15 2570 aa11.56□□□□□ -0.56
CMTM3-213ENST00000566756 COX17Q14061 63 aa11.56□□□□□ -0.56
CMTM3-213ENST00000566756 Q9HAA7 133 aa11.56□□□□□ -0.56
CMTM3-213ENST00000566756 A0A087WYN8 130 aa11.55□□□□□ -0.56
CMTM3-213ENST00000566756 XCL1P47992 114 aa11.55□□□□□ -0.56
CMTM3-213ENST00000566756 SMCR5Q8TEV8 140 aa11.55□□□□□ -0.56
CMTM3-213ENST00000566756 MAST4O15021 2626 aa11.55□□□□□ -0.56
CMTM3-213ENST00000566756 A0A1B0GX51 115 aa11.54□□□□□ -0.56
CMTM3-213ENST00000566756 EGFEM1PQ0D2K5 195 aa11.54□□□□□ -0.56
CMTM3-213ENST00000566756 NDUFC2O95298 119 aa11.54□□□□□ -0.56
CMTM3-213ENST00000566756 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
CMTM3-213ENST00000566756 ATP5G1P05496 136 aa11.52□□□□□ -0.56
CMTM3-213ENST00000566756 OXLD1Q5BKU9 147 aa11.52□□□□□ -0.56
CMTM3-213ENST00000566756 IGHV4-28A0A0C4DH34 117 aa11.52□□□□□ -0.57
CMTM3-213ENST00000566756 B5MCH6 92 aa11.52□□□□□ -0.57
CMTM3-213ENST00000566756 IGHV4-30-4P0DP06 118 aa11.52□□□□□ -0.57
CMTM3-213ENST00000566756 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
CMTM3-213ENST00000566756 MUC7Q8TAX7 377 aa11.51□□□□□ -0.57
CMTM3-213ENST00000566756 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
CMTM3-213ENST00000566756 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
CMTM3-213ENST00000566756 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
CMTM3-213ENST00000566756 OR13C6PQ8NH95 151 aa11.5□□□□□ -0.57
CMTM3-213ENST00000566756 LECT2O14960 151 aa11.5□□□□□ -0.57
CMTM3-213ENST00000566756 GAGE2AQ6NT46 116 aa11.5□□□□□ -0.57
CMTM3-213ENST00000566756 DEFB135Q30KP9 77 aa11.49□□□□□ -0.57
CMTM3-213ENST00000566756 KLK5Q9Y337 293 aaPredicted RBP11.49□□□□□ -0.57
CMTM3-213ENST00000566756 COL6A5A8TX70 2615 aa11.49□□□□□ -0.57
CMTM3-213ENST00000566756 KRTAP10-11P60412 298 aa11.48□□□□□ -0.57
CMTM3-213ENST00000566756 FAM236AA0A1B0GUQ0 79 aa11.47□□□□□ -0.57
CMTM3-213ENST00000566756 FAM236BA0A1B0GV22 79 aa11.47□□□□□ -0.57
CMTM3-213ENST00000566756 LINC00269Q8N2A0 174 aa11.47□□□□□ -0.57
CMTM3-213ENST00000566756 CHCHD10Q8WYQ3 142 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-213ENST00000566756 C11orf68Q9H3H3 251 aaKnown RBP11.47□□□□□ -0.57
CMTM3-213ENST00000566756 ORMDL1Q9P0S3 153 aa11.47□□□□□ -0.57
CMTM3-213ENST00000566756 MIFP14174 115 aa11.46□□□□□ -0.58
CMTM3-213ENST00000566756 REG3AQ06141 175 aa11.46□□□□□ -0.58
CMTM3-213ENST00000566756 TMEM126AQ9H061 195 aa11.46□□□□□ -0.58
CMTM3-213ENST00000566756 DAD1P61803 113 aa11.45□□□□□ -0.58
CMTM3-213ENST00000566756 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
CMTM3-213ENST00000566756 NANOS2P60321 138 aaKnown RBP11.45□□□□□ -0.58
CMTM3-213ENST00000566756 A0A096LPF7 62 aa11.44□□□□□ -0.58
CMTM3-213ENST00000566756 SS18L2Q9UHA2 77 aa11.44□□□□□ -0.58
CMTM3-213ENST00000566756 Q8NAQ8 132 aa11.43□□□□□ -0.58
CMTM3-213ENST00000566756 C14orf132Q9NPU4 83 aa11.43□□□□□ -0.58
CMTM3-213ENST00000566756 CMYA5Q8N3K9 4069 aa11.43□□□□□ -0.58
CMTM3-213ENST00000566756 ANGP03950 147 aaKnown RBP11.43□□□□□ -0.58
CMTM3-213ENST00000566756 C9orf129Q5T035 196 aaKnown RBP11.43□□□□□ -0.58
CMTM3-213ENST00000566756 JMJD7-PLA2G4BH0Y9G9 81 aa11.42□□□□□ -0.58
CMTM3-213ENST00000566756 Q6JHZ5 121 aa11.42□□□□□ -0.58
CMTM3-213ENST00000566756 Q8N814 137 aa11.41□□□□□ -0.58
CMTM3-213ENST00000566756 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
CMTM3-213ENST00000566756 PKD1L1Q8TDX9 2849 aa11.41□□□□□ -0.58
CMTM3-213ENST00000566756 HIST1H4AP62805 103 aaKnown RBP11.41□□□□□ -0.58
CMTM3-213ENST00000566756 LELP1Q5T871 98 aa11.41□□□□□ -0.58
CMTM3-213ENST00000566756 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
CMTM3-213ENST00000566756 SPART-AS1P0CW21 52 aa11.4□□□□□ -0.58
CMTM3-213ENST00000566756 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
CMTM3-213ENST00000566756 NCR3O14931 201 aa11.38□□□□□ -0.59
CMTM3-213ENST00000566756 CCKP06307 115 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms