RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ATOX1O00244 68 aa14.4□□□□□ -0.1
MAP1LC3B-206ENST00000564844 LINC01561Q8N1V8 128 aa14.4□□□□□ -0.1
MAP1LC3B-206ENST00000564844 RPL18AQ02543 176 aaKnown RBP14.4□□□□□ -0.1
MAP1LC3B-206ENST00000564844 CR1P17927 2039 aa14.4□□□□□ -0.11
MAP1LC3B-206ENST00000564844 Q6YL49 198 aa14.39□□□□□ -0.11
MAP1LC3B-206ENST00000564844 A8MTW9 85 aa14.38□□□□□ -0.11
MAP1LC3B-206ENST00000564844 TRAV23DV6A0A075B6W5 121 aa14.38□□□□□ -0.11
MAP1LC3B-206ENST00000564844 J3KT08 172 aa14.38□□□□□ -0.11
MAP1LC3B-206ENST00000564844 USP17L23D6RBM5 183 aa14.37□□□□□ -0.11
MAP1LC3B-206ENST00000564844 DEFB130BP0DP73 79 aa14.37□□□□□ -0.11
MAP1LC3B-206ENST00000564844 DEFB130AP0DP74 79 aa14.37□□□□□ -0.11
MAP1LC3B-206ENST00000564844 VWFP04275 2813 aa14.36□□□□□ -0.11
MAP1LC3B-206ENST00000564844 TRBV10-1A0A0K0K1A3 114 aa14.35□□□□□ -0.11
MAP1LC3B-206ENST00000564844 FAM19A1Q7Z5A9 133 aa14.35□□□□□ -0.11
MAP1LC3B-206ENST00000564844 PF4P02776 101 aa14.34□□□□□ -0.11
MAP1LC3B-206ENST00000564844 CRYGAP11844 174 aa14.33□□□□□ -0.11
MAP1LC3B-206ENST00000564844 IGHV3OR16-9A0A0B4J2B5 98 aa14.33□□□□□ -0.12
MAP1LC3B-206ENST00000564844 ESM1Q9NQ30 184 aa14.33□□□□□ -0.12
MAP1LC3B-206ENST00000564844 C9orf116Q5BN46 136 aaPredicted RBP14.32□□□□□ -0.12
MAP1LC3B-206ENST00000564844 IGLV10-54A0A075B6I4 117 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 H0YGX0 51 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 ORMDL1Q9P0S3 153 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 IGHV4-31P0DP07 118 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 ENHOQ6UWT2 76 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 FAM19A3Q7Z5A8 133 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
MAP1LC3B-206ENST00000564844 SERP2Q8N6R1 65 aa14.3□□□□□ -0.12
MAP1LC3B-206ENST00000564844 FASNP49327 2511 aaKnown RBP14.3□□□□□ -0.12
MAP1LC3B-206ENST00000564844 SS18Q15532 418 aa14.3□□□□□ -0.12
MAP1LC3B-206ENST00000564844 OXTP01178 125 aa14.29□□□□□ -0.12
MAP1LC3B-206ENST00000564844 BBC3Q96PG8 261 aaPredicted RBP14.29□□□□□ -0.12
MAP1LC3B-206ENST00000564844 TRBV6-8A0A0A6YYG3 113 aa14.28□□□□□ -0.12
MAP1LC3B-206ENST00000564844 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
MAP1LC3B-206ENST00000564844 Q6JHZ5 121 aa14.28□□□□□ -0.12
MAP1LC3B-206ENST00000564844 HRCT1Q6UXD1 115 aa14.28□□□□□ -0.12
MAP1LC3B-206ENST00000564844 GIG44P09565 113 aaPredicted RBP14.27□□□□□ -0.12
MAP1LC3B-206ENST00000564844 IL17DQ8TAD2 202 aa14.27□□□□□ -0.12
MAP1LC3B-206ENST00000564844 DPH3Q96FX2 82 aa14.27□□□□□ -0.13
MAP1LC3B-206ENST00000564844 TRBV6-4A0A1B0GX49 114 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 IBA57-AS1B1ANH7 110 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 F8WDY8 70 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 GHRHP01286 108 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 Q8N3U1 123 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 LINC00959A0A1B0GUT2 108 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 C4orf26Q17RF5 130 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 OVOL2Q9BRP0 275 aa14.26□□□□□ -0.13
MAP1LC3B-206ENST00000564844 UBR5O95071 2799 aaPredicted RBP14.25□□□□□ -0.13
MAP1LC3B-206ENST00000564844 CCL24O00175 119 aa14.25□□□□□ -0.13
MAP1LC3B-206ENST00000564844 DEFB4AO15263 64 aa14.25□□□□□ -0.13
MAP1LC3B-206ENST00000564844 FHL2Q14192 279 aa14.25□□□□□ -0.13
MAP1LC3B-206ENST00000564844 PLAC8L1A1L4L8 177 aa14.25□□□□□ -0.13
MAP1LC3B-206ENST00000564844 A0A087WZ39 114 aa14.24□□□□□ -0.13
MAP1LC3B-206ENST00000564844 A0A096LNT2 108 aa14.24□□□□□ -0.13
MAP1LC3B-206ENST00000564844 C20orf197Q8N268 126 aa14.23□□□□□ -0.13
MAP1LC3B-206ENST00000564844 DSCR9P59020 149 aa14.23□□□□□ -0.13
MAP1LC3B-206ENST00000564844 ATRQ13535 2644 aa14.23□□□□□ -0.13
MAP1LC3B-206ENST00000564844 UPK3BQ9BT76 320 aa14.23□□□□□ -0.13
MAP1LC3B-206ENST00000564844 CCKP06307 115 aa14.22□□□□□ -0.13
MAP1LC3B-206ENST00000564844 TMEM86BQ8N661 226 aa14.21□□□□□ -0.13
MAP1LC3B-206ENST00000564844 OBSCN-AS1Q96MR7 158 aa14.21□□□□□ -0.13
MAP1LC3B-206ENST00000564844 HELZ2Q9BYK8 2649 aaKnown RBP14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 J3QLI3 93 aa14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 M0R2N4 97 aa14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 GYPEP15421 78 aa14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 C6orf99Q4VX62 202 aa14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 LINC00269Q8N2A0 174 aa14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 UNC79Q9P2D8 2635 aa14.2□□□□□ -0.14
MAP1LC3B-206ENST00000564844 WFDC11Q8NEX6 87 aa14.19□□□□□ -0.14
MAP1LC3B-206ENST00000564844 NANOS2P60321 138 aaKnown RBP14.19□□□□□ -0.14
MAP1LC3B-206ENST00000564844 Q8N814 137 aa14.19□□□□□ -0.14
MAP1LC3B-206ENST00000564844 SPATA3Q8NHX4 192 aa14.18□□□□□ -0.14
MAP1LC3B-206ENST00000564844 C1orf43Q9BWL3 253 aa14.18□□□□□ -0.14
MAP1LC3B-206ENST00000564844 TEP1Q99973 2627 aaKnown RBP14.18□□□□□ -0.14
MAP1LC3B-206ENST00000564844 HAMPP81172 84 aa14.17□□□□□ -0.14
MAP1LC3B-206ENST00000564844 Q8NDZ9 215 aa14.17□□□□□ -0.14
MAP1LC3B-206ENST00000564844 C16orf74Q96GX8 76 aa14.17□□□□□ -0.14
MAP1LC3B-206ENST00000564844 TENM4Q6N022 2769 aa14.17□□□□□ -0.14
MAP1LC3B-206ENST00000564844 MRAPQ8TCY5 172 aa14.16□□□□□ -0.14
MAP1LC3B-206ENST00000564844 DNAJC9-AS1A6NH13 148 aa14.16□□□□□ -0.14
MAP1LC3B-206ENST00000564844 LAMTOR3Q9UHA4 124 aa14.16□□□□□ -0.14
MAP1LC3B-206ENST00000564844 TMEM258P61165 79 aa14.15□□□□□ -0.14
MAP1LC3B-206ENST00000564844 SEC61GP60059 68 aa14.15□□□□□ -0.14
MAP1LC3B-206ENST00000564844 PKIGQ9Y2B9 76 aa14.15□□□□□ -0.14
MAP1LC3B-206ENST00000564844 SCXQ7RTU7 201 aa14.13□□□□□ -0.15
MAP1LC3B-206ENST00000564844 S100A7L2Q5SY68 101 aa14.13□□□□□ -0.15
MAP1LC3B-206ENST00000564844 FSHBP01225 129 aa14.13□□□□□ -0.15
MAP1LC3B-206ENST00000564844 SNURFQ9Y675 71 aa14.12□□□□□ -0.15
MAP1LC3B-206ENST00000564844 PDZD2O15018 2839 aa14.12□□□□□ -0.15
MAP1LC3B-206ENST00000564844 C6orf223Q8N319 242 aa14.11□□□□□ -0.15
MAP1LC3B-206ENST00000564844 UBL5Q9BZL1 73 aa14.11□□□□□ -0.15
MAP1LC3B-206ENST00000564844 TMEM256-PLSCR3K7ERE1 68 aa14.1□□□□□ -0.15
MAP1LC3B-206ENST00000564844 HTN3P15516 51 aa14.1□□□□□ -0.15
MAP1LC3B-206ENST00000564844 TENM1Q9UKZ4 2725 aa14.1□□□□□ -0.15
MAP1LC3B-206ENST00000564844 HIVEP1P15822 2718 aa14.09□□□□□ -0.15
MAP1LC3B-206ENST00000564844 ANGP03950 147 aaKnown RBP14.09□□□□□ -0.15
MAP1LC3B-206ENST00000564844 DEFB113Q30KQ7 82 aa14.09□□□□□ -0.15
MAP1LC3B-206ENST00000564844 LY6G6DO95868 133 aa14.09□□□□□ -0.15
MAP1LC3B-206ENST00000564844 JMJD7-PLA2G4BH0Y9G9 81 aa14.08□□□□□ -0.16
MAP1LC3B-206ENST00000564844 RPS28P62857 69 aaKnown RBP14.08□□□□□ -0.16
MAP1LC3B-206ENST00000564844 C10orf25Q5T742 122 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms