RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 MALP21145 153 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 UBE2WQ96B02 151 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 LINC01556Q5JQF7 62 aa17.06■□□□□ 0.32
LINC01003-201ENST00000564834 GAGE12HA6NDE8 117 aa17.05■□□□□ 0.32
LINC01003-201ENST00000564834 NPC2P61916 151 aa17.05■□□□□ 0.32
LINC01003-201ENST00000564834 COPS9Q8WXC6 57 aa17.05■□□□□ 0.32
LINC01003-201ENST00000564834 A0A0U1RRA0 63 aa17.05■□□□□ 0.32
LINC01003-201ENST00000564834 PRO1854Q9UHT4 67 aa17.05■□□□□ 0.32
LINC01003-201ENST00000564834 LINC00308Q8TCZ7 52 aa17.04■□□□□ 0.32
LINC01003-201ENST00000564834 GAGE10A6NGK3 116 aa17.03■□□□□ 0.32
LINC01003-201ENST00000564834 EIF4EBP3O60516 100 aaPredicted RBP17.03■□□□□ 0.32
LINC01003-201ENST00000564834 GTF2H5Q6ZYL4 71 aa17.03■□□□□ 0.32
LINC01003-201ENST00000564834 K7EP34 96 aa17.02■□□□□ 0.32
LINC01003-201ENST00000564834 TSPAN13O95857 204 aa17.02■□□□□ 0.32
LINC01003-201ENST00000564834 IBA57-AS1B1ANH7 110 aa17.02■□□□□ 0.31
LINC01003-201ENST00000564834 PPDPFQ9H3Y8 114 aa17.02■□□□□ 0.31
LINC01003-201ENST00000564834 SPCS1Q9Y6A9 102 aa17.02■□□□□ 0.31
LINC01003-201ENST00000564834 CXCL5P42830 114 aa17.01■□□□□ 0.31
LINC01003-201ENST00000564834 KIAA0087Q14695 138 aa17.01■□□□□ 0.31
LINC01003-201ENST00000564834 DNAH10OSP0CZ25 163 aa17■□□□□ 0.31
LINC01003-201ENST00000564834 CKS1BP61024 79 aa16.99■□□□□ 0.31
LINC01003-201ENST00000564834 CFAP161Q6P656 301 aa16.99■□□□□ 0.31
LINC01003-201ENST00000564834 KLK5Q9Y337 293 aaPredicted RBP16.99■□□□□ 0.31
LINC01003-201ENST00000564834 LINC00588Q9Y4M8 146 aa16.98■□□□□ 0.31
LINC01003-201ENST00000564834 CCL18P55774 89 aa16.97■□□□□ 0.31
LINC01003-201ENST00000564834 SOSTDC1Q6X4U4 206 aa16.97■□□□□ 0.31
LINC01003-201ENST00000564834 NHLRC4P0CG21 123 aaPredicted RBP16.97■□□□□ 0.31
LINC01003-201ENST00000564834 ERG28Q9UKR5 140 aa16.97■□□□□ 0.31
LINC01003-201ENST00000564834 LINC00158P58513 81 aa16.96■□□□□ 0.31
LINC01003-201ENST00000564834 C2orf82Q6UX34 121 aa16.96■□□□□ 0.31
LINC01003-201ENST00000564834 MIR7-3HGQ8N6C7 128 aa16.96■□□□□ 0.31
LINC01003-201ENST00000564834 SPAG11BQ08648 103 aa16.93■□□□□ 0.3
LINC01003-201ENST00000564834 KRTAP26-1Q6PEX3 210 aa16.93■□□□□ 0.3
LINC01003-201ENST00000564834 PFN2P35080 140 aa16.92■□□□□ 0.3
LINC01003-201ENST00000564834 LYRM7Q5U5X0 104 aa16.91■□□□□ 0.3
LINC01003-201ENST00000564834 UPK3BQ9BT76 320 aa16.91■□□□□ 0.3
LINC01003-201ENST00000564834 C1orf43Q9BWL3 253 aa16.9■□□□□ 0.3
LINC01003-201ENST00000564834 LOC107984156A0A0G2JMH3 177 aa16.89■□□□□ 0.3
LINC01003-201ENST00000564834 ARL17AQ8IVW1 177 aa16.89■□□□□ 0.3
LINC01003-201ENST00000564834 COX17Q14061 63 aa16.89■□□□□ 0.29
LINC01003-201ENST00000564834 H7C2G1 150 aa16.87■□□□□ 0.29
LINC01003-201ENST00000564834 Q1RN00 199 aa16.87■□□□□ 0.29
LINC01003-201ENST00000564834 PRKDCP78527 4128 aaKnown RBP16.84■□□□□ 0.29
LINC01003-201ENST00000564834 C6orf223Q8N319 242 aa16.84■□□□□ 0.29
LINC01003-201ENST00000564834 IGKV2D-24A0A075B6R9 120 aa16.84■□□□□ 0.29
LINC01003-201ENST00000564834 RPL13AP40429 203 aaKnown RBP16.84■□□□□ 0.29
LINC01003-201ENST00000564834 PSMB2P49721 201 aa16.84■□□□□ 0.29
LINC01003-201ENST00000564834 SND1-IT1Q9HBX3 110 aa16.84■□□□□ 0.29
LINC01003-201ENST00000564834 TRBV30A0A0K0K1B3 111 aa16.82■□□□□ 0.28
LINC01003-201ENST00000564834 NTN5Q8WTR8 489 aaPredicted RBP16.82■□□□□ 0.28
LINC01003-201ENST00000564834 UNQ6190/PRO20217Q6UXQ8 127 aa16.82■□□□□ 0.28
LINC01003-201ENST00000564834 LINC00526Q96FQ7 95 aa16.82■□□□□ 0.28
LINC01003-201ENST00000564834 H3BMG7 143 aa16.81■□□□□ 0.28
LINC01003-201ENST00000564834 SCGB1C2P0DMR2 95 aa16.81■□□□□ 0.28
LINC01003-201ENST00000564834 Q9HAA7 133 aa16.81■□□□□ 0.28
LINC01003-201ENST00000564834 APLNQ9ULZ1 77 aa16.81■□□□□ 0.28
LINC01003-201ENST00000564834 TRBV20-1A0A075B6N2 111 aa16.8■□□□□ 0.28
LINC01003-201ENST00000564834 C10orf25Q5T742 122 aa16.8■□□□□ 0.28
LINC01003-201ENST00000564834 DYNC2H1Q8NCM8 4307 aaKnown RBP16.8■□□□□ 0.28
LINC01003-201ENST00000564834 C9orf116Q5BN46 136 aaPredicted RBP16.79■□□□□ 0.28
LINC01003-201ENST00000564834 C15orf56Q8N910 161 aa16.79■□□□□ 0.28
LINC01003-201ENST00000564834 GVQW2A0A096LPI5 108 aaPredicted RBP16.79■□□□□ 0.28
LINC01003-201ENST00000564834 ZNF561-AS1K7EIQ3 104 aa16.79■□□□□ 0.28
LINC01003-201ENST00000564834 MUC7Q8TAX7 377 aa16.79■□□□□ 0.28
LINC01003-201ENST00000564834 TRIAP1O43715 76 aa16.78■□□□□ 0.28
LINC01003-201ENST00000564834 MEGF8Q7Z7M0 2845 aa16.78■□□□□ 0.28
LINC01003-201ENST00000564834 TRAV13-2A0A0B4J235 113 aa16.77■□□□□ 0.28
LINC01003-201ENST00000564834 TCL1BO95988 128 aa16.77■□□□□ 0.27
LINC01003-201ENST00000564834 IGKV2-28A0A075B6P5 120 aa16.76■□□□□ 0.27
LINC01003-201ENST00000564834 NUPR2A6NF83 97 aa16.76■□□□□ 0.27
LINC01003-201ENST00000564834 IGKV2D-28P01615 120 aa16.76■□□□□ 0.27
LINC01003-201ENST00000564834 HIGD2BQ4VC39 106 aa16.76■□□□□ 0.27
LINC01003-201ENST00000564834 COX6CP09669 75 aa16.74■□□□□ 0.27
LINC01003-201ENST00000564834 RMI2Q96E14 147 aa16.74■□□□□ 0.27
LINC01003-201ENST00000564834 C2orf48Q96LS8 159 aa16.74■□□□□ 0.27
LINC01003-201ENST00000564834 LINC00337Q8N6G1 96 aa16.73■□□□□ 0.27
LINC01003-201ENST00000564834 CAMK2N2Q96S95 79 aa16.73■□□□□ 0.27
LINC01003-201ENST00000564834 C6orf48Q9UBA6 75 aa16.73■□□□□ 0.27
LINC01003-201ENST00000564834 F8W1H4 67 aa16.72■□□□□ 0.27
LINC01003-201ENST00000564834 CSMD3Q7Z407 3707 aa16.72■□□□□ 0.27
LINC01003-201ENST00000564834 F8WDY8 70 aa16.71■□□□□ 0.27
LINC01003-201ENST00000564834 UBE2DNLQ8IWF7 75 aa16.71■□□□□ 0.27
LINC01003-201ENST00000564834 DNAH1Q9P2D7 4330 aa16.71■□□□□ 0.26
LINC01003-201ENST00000564834 NDUFC2O95298 119 aa16.69■□□□□ 0.26
LINC01003-201ENST00000564834 PRO0461Q9UI25 63 aa16.69■□□□□ 0.26
LINC01003-201ENST00000564834 LYSTQ99698 3801 aa16.68■□□□□ 0.26
LINC01003-201ENST00000564834 DNAH7Q8WXX0 4024 aa16.67■□□□□ 0.26
LINC01003-201ENST00000564834 ATXN8Q156A1 80 aa16.66■□□□□ 0.26
LINC01003-201ENST00000564834 Q6ZRU5 148 aa16.66■□□□□ 0.26
LINC01003-201ENST00000564834 MTURNQ8N3F0 131 aa16.64■□□□□ 0.25
LINC01003-201ENST00000564834 RPL28P46779 137 aaKnown RBP16.63■□□□□ 0.25
LINC01003-201ENST00000564834 WFDC2Q14508 124 aa16.62■□□□□ 0.25
LINC01003-201ENST00000564834 KRTAP1-5Q9BYS1 174 aa16.61■□□□□ 0.25
LINC01003-201ENST00000564834 USP17L23D6RBM5 183 aa16.6■□□□□ 0.25
LINC01003-201ENST00000564834 SYCNQ0VAF6 134 aa16.6■□□□□ 0.25
LINC01003-201ENST00000564834 CASC10Q5T4H9 136 aa16.6■□□□□ 0.25
LINC01003-201ENST00000564834 CLEC2BQ92478 149 aa16.6■□□□□ 0.25
LINC01003-201ENST00000564834 PLECQ15149 4684 aaKnown RBP16.6■□□□□ 0.25
LINC01003-201ENST00000564834 OR13C6PQ8NH95 151 aa16.59■□□□□ 0.25
LINC01003-201ENST00000564834 TENM2Q9NT68 2774 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms