RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 TNRC18O15417 2968 aaPredicted RBP0.25□□□□□ -2.37
SCAPER-213ENST00000564757 DNHD1Q96M86 4753 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 CCDC168Q8NDH2 2452 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 SPTBN1Q01082 2364 aaKnown RBP0.25□□□□□ -2.37
SCAPER-213ENST00000564757 ZFHX4Q86UP3 3567 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 PKD1L1Q8TDX9 2849 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 NBEAL2Q6ZNJ1 2754 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 PAPPAQ13219 1627 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 NSD3Q9BZ95 1437 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 WNK2Q9Y3S1 2297 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 RBP2P50120 134 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
SCAPER-213ENST00000564757 FLNCQ14315 2725 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 HECTD1Q9ULT8 2610 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 STAB2Q8WWQ8 2551 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 USH2AO75445 5202 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 DOPEY1Q5JWR5 2465 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 PCNTO95613 3336 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 TRBV7-4A0A0J9YYF1 115 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 ABCA3Q99758 1704 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 SCN7AQ01118 1682 aa0.23□□□□□ -2.37
SCAPER-213ENST00000564757 PPRC1Q5VV67 1664 aaKnown RBP0.23□□□□□ -2.37
SCAPER-213ENST00000564757 CSMD1Q96PZ7 3565 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 FASNP49327 2511 aaKnown RBP0.22□□□□□ -2.37
SCAPER-213ENST00000564757 GVINP1Q7Z2Y8 2422 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 TRAV30A0A087WSZ9 112 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 NDUFC1O43677 76 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 SPRR1AP35321 89 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 ANKRD11Q6UB99 2663 aaPredicted RBP0.22□□□□□ -2.37
SCAPER-213ENST00000564757 DIP2CQ9Y2E4 1556 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 PDCD11Q14690 1871 aaKnown RBP0.22□□□□□ -2.37
SCAPER-213ENST00000564757 ZFYVE16Q7Z3T8 1539 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
SCAPER-213ENST00000564757 ITPR3Q14573 2671 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
SCAPER-213ENST00000564757 TOPAZ1Q8N9V7 1692 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 A0A0G2JND7 137 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 COX6B1P14854 86 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 PMCHL2Q9BQD1 86 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 ADGRL2O95490 1459 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 MAGI1Q96QZ7 1491 aaPredicted RBP0.21□□□□□ -2.38
SCAPER-213ENST00000564757 MUC12Q9UKN1 5478 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 TENM2Q9NT68 2774 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 ABCC5O15440 1437 aa0.21□□□□□ -2.38
SCAPER-213ENST00000564757 A0A0C4DFX4 3053 aa0.2□□□□□ -2.38
SCAPER-213ENST00000564757 AKAP13Q12802 2813 aa0.2□□□□□ -2.38
SCAPER-213ENST00000564757 FXYD6Q9H0Q3 95 aa0.2□□□□□ -2.38
SCAPER-213ENST00000564757 CACFD1Q9UGQ2 172 aa0.2□□□□□ -2.38
SCAPER-213ENST00000564757 CHD1O14646 1710 aa0.2□□□□□ -2.38
SCAPER-213ENST00000564757 USP9YO00507 2555 aaPredicted RBP0.2□□□□□ -2.38
SCAPER-213ENST00000564757 EPG5Q9HCE0 2579 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 HUWE1Q7Z6Z7 4374 aaKnown RBP0.19□□□□□ -2.38
SCAPER-213ENST00000564757 LRRK2Q5S007 2527 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 BOD1L1Q8NFC6 3051 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 C1orf167Q5SNV9 1468 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 C7orf77A4D0Y5 90 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 PMCHL1Q16048 86 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 PSMG4Q5JS54 123 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 LCN9Q8WX39 176 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 ATRQ13535 2644 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 KMT2AQ03164 3969 aa0.19□□□□□ -2.38
SCAPER-213ENST00000564757 HERC2O95714 4834 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 NUP188Q5SRE5 1749 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 FLNBO75369 2602 aaKnown RBP0.18□□□□□ -2.38
SCAPER-213ENST00000564757 EP300Q09472 2414 aaPredicted RBP0.18□□□□□ -2.38
SCAPER-213ENST00000564757 GCN1Q92616 2671 aaKnown RBP0.18□□□□□ -2.38
SCAPER-213ENST00000564757 RIF1Q5UIP0 2472 aaKnown RBP0.18□□□□□ -2.38
SCAPER-213ENST00000564757 A0A087WVE0 104 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 SYS1-DBNDD2H3BUS1 97 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 LINC00032P0C843 101 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 ACBD7Q8N6N7 88 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 LINC00846Q9NV44 126 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 SZT2Q5T011 3432 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 LAMA3Q16787 3333 aa0.18□□□□□ -2.38
SCAPER-213ENST00000564757 TSC2P49815 1807 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 GAPVD1Q14C86 1478 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 MYO9AB2RTY4 2548 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 LAMA2P24043 3122 aaKnown RBP0.17□□□□□ -2.38
SCAPER-213ENST00000564757 CEP350Q5VT06 3117 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 LINC00959A0A1B0GUT2 108 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 H3BQF6 201 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 ATOX1O00244 68 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 MT-ATP8P03928 68 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 UQCRHP07919 91 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 DEFB123Q8N688 67 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 USMG5Q96IX5 58 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 CNTLNQ9NXG0 1405 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 SETBP1Q9Y6X0 1596 aa0.17□□□□□ -2.38
SCAPER-213ENST00000564757 MLH3Q9UHC1 1453 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 ACANP16112 2415 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 MUC3AQ02505 3323 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 SPRR1BP22528 89 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 ASIPP42127 132 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 COL5A1-AS1Q5SY13 56 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 UNC80Q8N2C7 3258 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 KALRNO60229 2985 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 SPTA1P02549 2419 aa0.16□□□□□ -2.38
SCAPER-213ENST00000564757 MKI67P46013 3256 aaKnown RBP0.16□□□□□ -2.38
SCAPER-213ENST00000564757 NLRP1Q9C000 1473 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms