RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 NSD1Q96L73 2696 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 A0A1B0GUV1 79 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 CDK2AP2O75956 126 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 MIFP14174 115 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 SPATA3Q8NHX4 192 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 LINC00476Q8WZB0 136 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 PRO0461Q9UI25 63 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 J3QR89 54 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 SCGB1C2P0DMR2 95 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 GAGE6Q13070 117 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 WFDC2Q14508 124 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 FAM222AQ5U5X8 452 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 CHCHD5Q9BSY4 110 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 NIPBLQ6KC79 2804 aaeCLIP5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 TRBV30A0A0K0K1B3 111 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 PSMB2P49721 201 aa5.05□□□□□ -1.6
HERPUD1-209ENST00000564678 IGLV4-60A0A075B6I1 120 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 IGHV3OR16-9A0A0B4J2B5 98 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 PAX4O43316 350 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 DEFB135Q30KP9 77 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 SFTA2Q6UW10 78 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 VPS25Q9BRG1 176 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 TCL1BO95988 128 aa5.04□□□□□ -1.6
HERPUD1-209ENST00000564678 HIVEP1P15822 2718 aa5.03□□□□□ -1.6
HERPUD1-209ENST00000564678 TEX48A0A1B0GUV7 120 aa5.03□□□□□ -1.6
HERPUD1-209ENST00000564678 COX6CP09669 75 aa5.03□□□□□ -1.6
HERPUD1-209ENST00000564678 DAD1P61803 113 aa5.03□□□□□ -1.6
HERPUD1-209ENST00000564678 PRIMA1Q86XR5 153 aa5.03□□□□□ -1.6
HERPUD1-209ENST00000564678 Q8NAQ8 132 aa5.03□□□□□ -1.6
HERPUD1-209ENST00000564678 LINC00959A0A1B0GUT2 108 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 ATP5G1P05496 136 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 SPART-AS1P0CW21 52 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 Q1RN00 199 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 ETDBQ3ZM63 59 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 SH2D6Q7Z4S9 175 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 SS18Q15532 418 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 MEIG1Q5JSS6 88 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 COX7B2Q8TF08 81 aa5.02□□□□□ -1.61
HERPUD1-209ENST00000564678 TMEM262E9PQX1 116 aa5.01□□□□□ -1.61
HERPUD1-209ENST00000564678 ATXN8Q156A1 80 aa5.01□□□□□ -1.61
HERPUD1-209ENST00000564678 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
HERPUD1-209ENST00000564678 LINC01600Q96MT4 127 aa5.01□□□□□ -1.61
HERPUD1-209ENST00000564678 ICOSQ9Y6W8 199 aa5.01□□□□□ -1.61
HERPUD1-209ENST00000564678 H7C2G1 150 aa5□□□□□ -1.61
HERPUD1-209ENST00000564678 TEN1Q86WV5 123 aa5□□□□□ -1.61
HERPUD1-209ENST00000564678 DAND5Q8N907 189 aa5□□□□□ -1.61
HERPUD1-209ENST00000564678 IGKV3OR2-268A0A0C4DH90 116 aa4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 IBA57-AS1B1ANH7 110 aa4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 NPC2P61916 151 aa4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 TEP1Q99973 2627 aaKnown RBP4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 DEFB4AO15263 64 aa4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 SLC25A20O43772 301 aa4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 MTURNQ8N3F0 131 aa4.99□□□□□ -1.61
HERPUD1-209ENST00000564678 VWFP04275 2813 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 EGFEM1PQ0D2K5 195 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 SOSTDC1Q6X4U4 206 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 Q8IZM0 81 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 PPDPFLQ8WWR9 84 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 CELA1Q9UNI1 258 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 ATRQ13535 2644 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 IGLV5-52A0A0A0MRZ9 124 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 TRAV13-2A0A0B4J235 113 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 TRBV10-2A0A0K0K1G8 114 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 C9JAW5 83 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 H3BNG1 76 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 LELP1Q5T871 98 aa4.98□□□□□ -1.61
HERPUD1-209ENST00000564678 A0A096LPF7 62 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 LST1O00453 97 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 ANKRD29Q8N6D5 301 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 TRRAPQ9Y4A5 3859 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 F8P00451 2351 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 CXCL5P42830 114 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 XCL1P47992 114 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 LINC00269Q8N2A0 174 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 MIR7-3HGQ8N6C7 128 aa4.97□□□□□ -1.61
HERPUD1-209ENST00000564678 H3BT86 120 aa4.96□□□□□ -1.62
HERPUD1-209ENST00000564678 LINC00158P58513 81 aa4.96□□□□□ -1.62
HERPUD1-209ENST00000564678 REG3AQ06141 175 aa4.96□□□□□ -1.62
HERPUD1-209ENST00000564678 C3orf56Q8N813 242 aa4.96□□□□□ -1.62
HERPUD1-209ENST00000564678 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.62
HERPUD1-209ENST00000564678 COX7A2LO14548 114 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 ANGP03950 147 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 COX17Q14061 63 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 NBEAL2Q6ZNJ1 2754 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 KRTAP10-11P60412 298 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 CHCHD10Q8WYQ3 142 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 CARD19Q96LW7 228 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 C11orf68Q9H3H3 251 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 SND1-IT1Q9HBX3 110 aa4.95□□□□□ -1.62
HERPUD1-209ENST00000564678 RPL28P46779 137 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 MUC7Q8TAX7 377 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 PRR34Q9NV39 138 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms