RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
COMMD4-210ENST00000564587 C9orf118A6NHY6 69 aa10.5□□□□□ -0.73
COMMD4-210ENST00000564587 IBA57-AS1B1ANH7 110 aa10.5□□□□□ -0.73
COMMD4-210ENST00000564587 MUSTN1Q8IVN3 82 aa10.5□□□□□ -0.73
COMMD4-210ENST00000564587 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
COMMD4-210ENST00000564587 CKS1BP61024 79 aa10.49□□□□□ -0.73
COMMD4-210ENST00000564587 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
COMMD4-210ENST00000564587 ADAMTSL4-AS1Q5T5F5 129 aa10.48□□□□□ -0.73
COMMD4-210ENST00000564587 RMI2Q96E14 147 aa10.48□□□□□ -0.73
COMMD4-210ENST00000564587 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
COMMD4-210ENST00000564587 KIAA0087Q14695 138 aa10.47□□□□□ -0.73
COMMD4-210ENST00000564587 A0A0B4J2C4 111 aa10.46□□□□□ -0.73
COMMD4-210ENST00000564587 A4D1N5 150 aa10.46□□□□□ -0.73
COMMD4-210ENST00000564587 MUC7Q8TAX7 377 aa10.46□□□□□ -0.73
COMMD4-210ENST00000564587 F8WDY8 70 aa10.45□□□□□ -0.74
COMMD4-210ENST00000564587 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
COMMD4-210ENST00000564587 COX17Q14061 63 aa10.45□□□□□ -0.74
COMMD4-210ENST00000564587 RAB37Q96AX2 223 aa10.45□□□□□ -0.74
COMMD4-210ENST00000564587 KRTAP26-1Q6PEX3 210 aa10.44□□□□□ -0.74
COMMD4-210ENST00000564587 LINC00308Q8TCZ7 52 aa10.44□□□□□ -0.74
COMMD4-210ENST00000564587 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
COMMD4-210ENST00000564587 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 K7ERJ3 54 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 CFC1BP0CG36 223 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 CFC1P0CG37 223 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 LINC00158P58513 81 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 UBE2DNLQ8IWF7 75 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 PRO1854Q9UHT4 67 aa10.43□□□□□ -0.74
COMMD4-210ENST00000564587 H3BUT2 72 aa10.42□□□□□ -0.74
COMMD4-210ENST00000564587 VAMP3Q15836 100 aa10.42□□□□□ -0.74
COMMD4-210ENST00000564587 FABP2P12104 132 aa10.41□□□□□ -0.74
COMMD4-210ENST00000564587 DNAH9Q9NYC9 4486 aa10.41□□□□□ -0.74
COMMD4-210ENST00000564587 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.74
COMMD4-210ENST00000564587 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 ZNF561-AS1K7EIQ3 104 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 LYRM7Q5U5X0 104 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 DAND5Q8N907 189 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
COMMD4-210ENST00000564587 C2orf82Q6UX34 121 aa10.39□□□□□ -0.75
COMMD4-210ENST00000564587 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
COMMD4-210ENST00000564587 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-210ENST00000564587 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
COMMD4-210ENST00000564587 PFN2P35080 140 aa10.38□□□□□ -0.75
COMMD4-210ENST00000564587 NPC2P61916 151 aa10.38□□□□□ -0.75
COMMD4-210ENST00000564587 Q9HAA7 133 aa10.38□□□□□ -0.75
COMMD4-210ENST00000564587 TRBV30A0A0K0K1B3 111 aa10.37□□□□□ -0.75
COMMD4-210ENST00000564587 UBE2V1Q13404 147 aa10.37□□□□□ -0.75
COMMD4-210ENST00000564587 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
COMMD4-210ENST00000564587 GAGE10A6NGK3 116 aa10.36□□□□□ -0.75
COMMD4-210ENST00000564587 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
COMMD4-210ENST00000564587 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
COMMD4-210ENST00000564587 TSPAN13O95857 204 aa10.35□□□□□ -0.75
COMMD4-210ENST00000564587 SOSTDC1Q6X4U4 206 aa10.35□□□□□ -0.75
COMMD4-210ENST00000564587 STAB2Q8WWQ8 2551 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 K7EP34 96 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 SND1-IT1Q9HBX3 110 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
COMMD4-210ENST00000564587 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
COMMD4-210ENST00000564587 C6orf223Q8N319 242 aa10.33□□□□□ -0.76
COMMD4-210ENST00000564587 NAA38Q9BRA0 125 aaKnown RBP10.33□□□□□ -0.76
COMMD4-210ENST00000564587 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
COMMD4-210ENST00000564587 Q1RN00 199 aa10.32□□□□□ -0.76
COMMD4-210ENST00000564587 NDUFC2O95298 119 aa10.31□□□□□ -0.76
COMMD4-210ENST00000564587 HIGD2BQ4VC39 106 aa10.31□□□□□ -0.76
COMMD4-210ENST00000564587 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
COMMD4-210ENST00000564587 COX6CP09669 75 aa10.3□□□□□ -0.76
COMMD4-210ENST00000564587 PSMB2P49721 201 aa10.3□□□□□ -0.76
COMMD4-210ENST00000564587 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
COMMD4-210ENST00000564587 C10orf25Q5T742 122 aa10.3□□□□□ -0.76
COMMD4-210ENST00000564587 C6orf48Q9UBA6 75 aa10.3□□□□□ -0.76
COMMD4-210ENST00000564587 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
COMMD4-210ENST00000564587 SYCNQ0VAF6 134 aa10.29□□□□□ -0.76
COMMD4-210ENST00000564587 LINC00526Q96FQ7 95 aa10.29□□□□□ -0.76
COMMD4-210ENST00000564587 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
COMMD4-210ENST00000564587 BIRC6Q9NR09 4857 aa10.28□□□□□ -0.76
COMMD4-210ENST00000564587 NBDYA0A0U1RRE5 68 aa10.27□□□□□ -0.77
COMMD4-210ENST00000564587 USP17L23D6RBM5 183 aa10.27□□□□□ -0.77
COMMD4-210ENST00000564587 H7C2G1 150 aa10.27□□□□□ -0.77
COMMD4-210ENST00000564587 C9orf116Q5BN46 136 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-210ENST00000564587 COL7A1Q02388 2944 aa10.27□□□□□ -0.77
COMMD4-210ENST00000564587 Q6ZRU5 148 aa10.26□□□□□ -0.77
COMMD4-210ENST00000564587 PSCAO43653 123 aa10.25□□□□□ -0.77
COMMD4-210ENST00000564587 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
COMMD4-210ENST00000564587 WWC2-AS2Q96NR7 200 aa10.25□□□□□ -0.77
COMMD4-210ENST00000564587 KRTAP17-1Q9BYP8 105 aa10.25□□□□□ -0.77
COMMD4-210ENST00000564587 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
COMMD4-210ENST00000564587 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
COMMD4-210ENST00000564587 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
COMMD4-210ENST00000564587 CARD19Q96LW7 228 aa10.24□□□□□ -0.77
COMMD4-210ENST00000564587 KRTAP1-5Q9BYS1 174 aa10.24□□□□□ -0.77
COMMD4-210ENST00000564587 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
COMMD4-210ENST00000564587 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
COMMD4-210ENST00000564587 TRIAP1O43715 76 aa10.22□□□□□ -0.77
COMMD4-210ENST00000564587 TLX1NBP0CAT3 122 aa10.22□□□□□ -0.77
COMMD4-210ENST00000564587 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms