RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TMEM170BQ5T4T1 132 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 ZNF818PQ6ZRF7 136 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 LINC00643Q86TS7 51 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 FAM223AQ8IWN6 122 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 CLECL1Q8IZS7 167 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 BPESC1Q9GZL8 116 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 PDCD11Q14690 1871 aaKnown RBP0.95□□□□□ -2.26
CHD9-209ENST00000564255 ZFHX3Q15911 3703 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 TRBV25-1A0A075B6N4 114 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 A0A087WXM4 84 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 TRBV10-1A0A0K0K1A3 114 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 TEX49A0A1B0GTD5 131 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 CNBPP62633 177 aaKnown RBP0.94□□□□□ -2.26
CHD9-209ENST00000564255 CSAG1Q6PB30 78 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 IFI27L1Q96BM0 104 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 LIMD2Q9BT23 127 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 RYR2Q92736 4967 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 BRWD1Q9NSI6 2320 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 COL6A6A6NMZ7 2263 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 PCNTO95613 3336 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 TMEM30CPA0ZSE6 113 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 TFF1P04155 84 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 COX6CP09669 75 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 SFTA3P0C7M3 94 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 SMIM11AP58511 58 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 C1orf137Q5JT78 98 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 XAF1Q6GPH4 301 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 CDC42SE2Q9NRR3 84 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 DLG5Q8TDM6 1919 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 BIRC6Q9NR09 4857 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 KIAA2026Q5HYC2 2103 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 CREBBPQ92793 2442 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 CEP192Q8TEP8 1941 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 SNRNP200O75643 2136 aaKnown RBP0.94□□□□□ -2.26
CHD9-209ENST00000564255 PCDH15Q96QU1 1955 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 A0A0J9YY99 117 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 UMAD1C9J7I0 102 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 SMIM13P0DJ93 91 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 EDDM3BP56851 147 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 DMAC1Q96GE9 116 aa0.94□□□□□ -2.26
CHD9-209ENST00000564255 TEP1Q99973 2627 aaKnown RBP0.93□□□□□ -2.26
CHD9-209ENST00000564255 ABCA12Q86UK0 2595 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 ZFYVE26Q68DK2 2539 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 CLPSL1A2RUU4 121 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 HCRTO43612 131 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 HMGN2P05204 90 aaKnown RBP0.93□□□□□ -2.26
CHD9-209ENST00000564255 DEFB121Q5J5C9 76 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 C10orf128Q5T292 105 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 PATE1Q8WXA2 126 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 ICE1Q9Y2F5 2266 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 SZT2Q5T011 3432 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 NUPR2A6NF83 97 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 TMEM14DPA8MWL7 114 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 CHKB-CPT1BH3BT56 60 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 ZNF56Q15929 161 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 DYNLRB1Q9NP97 96 aa0.93□□□□□ -2.26
CHD9-209ENST00000564255 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 HEATR5BQ9P2D3 2071 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 SPTAN1Q13813 2472 aaKnown RBP0.92□□□□□ -2.26
CHD9-209ENST00000564255 IGKV3-7A0A075B6H7 116 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 TRBV6-7A0A0A0MS04 114 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 LOC101927531A0A1B0GV80 90 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 HIGD1CA8MV81 97 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 F8WEM9 126 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 HMGN4O00479 90 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 ELOF1P60002 83 aaKnown RBP0.92□□□□□ -2.26
CHD9-209ENST00000564255 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 NDUFA4L2Q9NRX3 87 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 ORMDL1Q9P0S3 153 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 MYOFQ9NZM1 2061 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 IGLV3-32A0A0A0MS00 114 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 IQCF6A8MYZ5 107 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 C20orf197Q8N268 126 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 TMEM14BQ9NUH8 114 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 MRPL36Q9P0J6 103 aaKnown RBP0.92□□□□□ -2.26
CHD9-209ENST00000564255 LENEPQ9Y5L5 61 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 A0A0C4DFX4 3053 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 HECTD1Q9ULT8 2610 aa0.92□□□□□ -2.26
CHD9-209ENST00000564255 C10orf142B7Z368 130 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 IGHV3-30P01768 117 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 SAA2P0DJI9 122 aaPredicted RBP0.91□□□□□ -2.26
CHD9-209ENST00000564255 IGHV3-30-5P0DP03 117 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 COX6B1P14854 86 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 SFTA2Q6UW10 78 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 DEFB119Q8N690 84 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 UNC80Q8N2C7 3258 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 FBN1P35555 2871 aaKnown RBP0.91□□□□□ -2.26
CHD9-209ENST00000564255 URB1O60287 2271 aaKnown RBP0.91□□□□□ -2.26
CHD9-209ENST00000564255 HTTP42858 3142 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 MED12LQ86YW9 2145 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 MYMXA0A1B0GTQ4 84 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 LOC285095A0A1B0GVY8 99 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 FAM223BA6NKX1 122 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 ZNF815PA8K554 130 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 KRTAP2-3P0C7H8 128 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 COX8AP10176 69 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 PDE6GP18545 87 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 PSMG4Q5JS54 123 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 Q86TA4 180 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 KRTAP2-4Q9BYR9 128 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms