RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 CD164L2Q6UWJ8 174 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 MUC7Q8TAX7 377 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 C14orf144Q96I85 54 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 UPK3BQ9BT76 320 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 Q9H8V8 135 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 LINC00588Q9Y4M8 146 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 LINC00587B1AMM8 73 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 USP17L23D6RBM5 183 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 J3QQQ9 107 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 DLEU1O43261 78 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 DNAH10OSP0CZ25 163 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 TTC32Q5I0X7 151 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 LINC01561Q8N1V8 128 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
SMG1-209ENST00000563836 TOMM7Q9P0U1 55 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 APLNQ9ULZ1 77 aa5.56□□□□□ -1.52
SMG1-209ENST00000563836 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 IGHV3-64A0A075B6Q5 118 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 IGLV5-45A0A087WSX0 123 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 MYMXA0A1B0GTQ4 84 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 DDTP30046 118 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 ZFAND6Q6FIF0 208 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 CDKN2A-AS1Q9UH64 79 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 NBEAL1Q6ZS30 2694 aa5.55□□□□□ -1.52
SMG1-209ENST00000563836 A0A087WZ39 114 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 C3orf84H3BNL1 204 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 M0R143 59 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 CXCL5P42830 114 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 CKS1BP61024 79 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 HERV-K104P63124 156 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 C6orf226Q5I0X4 101 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 C5orf38Q86SI9 138 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 MTURNQ8N3F0 131 aa5.54□□□□□ -1.52
SMG1-209ENST00000563836 PSCAO43653 123 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 SEC61BP60468 96 aaKnown RBP5.53□□□□□ -1.52
SMG1-209ENST00000563836 SRSF9Q13242 221 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMG1-209ENST00000563836 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 COX7B2Q8TF08 81 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 Q9HAA7 133 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 DNAH3Q8TD57 4116 aa5.53□□□□□ -1.52
SMG1-209ENST00000563836 IGHV3OR16-9A0A0B4J2B5 98 aa5.52□□□□□ -1.53
SMG1-209ENST00000563836 A0A1B0GV72 72 aa5.52□□□□□ -1.53
SMG1-209ENST00000563836 IBA57-AS1B1ANH7 110 aa5.52□□□□□ -1.53
SMG1-209ENST00000563836 COX6A2Q02221 97 aa5.52□□□□□ -1.53
SMG1-209ENST00000563836 ORAOV1Q8WV07 137 aa5.52□□□□□ -1.53
SMG1-209ENST00000563836 FAM104AQ969W3 186 aa5.52□□□□□ -1.53
SMG1-209ENST00000563836 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
SMG1-209ENST00000563836 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
SMG1-209ENST00000563836 PCP2Q8IVA1 136 aa5.51□□□□□ -1.53
SMG1-209ENST00000563836 Q8IZM0 81 aa5.51□□□□□ -1.53
SMG1-209ENST00000563836 HIST1H4GQ99525 98 aa5.51□□□□□ -1.53
SMG1-209ENST00000563836 HIGD1BQ9P298 99 aa5.51□□□□□ -1.53
SMG1-209ENST00000563836 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
SMG1-209ENST00000563836 NDUFA1O15239 70 aa5.5□□□□□ -1.53
SMG1-209ENST00000563836 SEC61GP60059 68 aa5.5□□□□□ -1.53
SMG1-209ENST00000563836 SPAG11BQ08648 103 aa5.5□□□□□ -1.53
SMG1-209ENST00000563836 HSD52Q0P140 79 aa5.5□□□□□ -1.53
SMG1-209ENST00000563836 TAL2Q16559 108 aa5.5□□□□□ -1.53
SMG1-209ENST00000563836 A6NDN8 102 aa5.49□□□□□ -1.53
SMG1-209ENST00000563836 BATFQ16520 125 aa5.49□□□□□ -1.53
SMG1-209ENST00000563836 C14orf177Q52M58 125 aa5.49□□□□□ -1.53
SMG1-209ENST00000563836 Q6ZVH6 145 aa5.49□□□□□ -1.53
SMG1-209ENST00000563836 NBDYA0A0U1RRE5 68 aa5.48□□□□□ -1.53
SMG1-209ENST00000563836 LY6G6CO95867 125 aa5.48□□□□□ -1.53
SMG1-209ENST00000563836 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
SMG1-209ENST00000563836 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
SMG1-209ENST00000563836 TENM3Q9P273 2699 aa5.48□□□□□ -1.53
SMG1-209ENST00000563836 A0A0J9YXY3 114 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 TIMM17BO60830 172 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 LINC00158P58513 81 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 MAPKAPK5-AS1Q8N8E1 139 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 CAMK2N2Q96S95 79 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
SMG1-209ENST00000563836 PKIGQ9Y2B9 76 aa5.47□□□□□ -1.53
SMG1-209ENST00000563836 VPREB1P12018 145 aa5.46□□□□□ -1.54
SMG1-209ENST00000563836 IFITM1P13164 125 aa5.46□□□□□ -1.54
SMG1-209ENST00000563836 MT3P25713 68 aa5.46□□□□□ -1.54
SMG1-209ENST00000563836 COX17Q14061 63 aa5.46□□□□□ -1.54
SMG1-209ENST00000563836 CASC10Q5T4H9 136 aa5.46□□□□□ -1.54
SMG1-209ENST00000563836 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
SMG1-209ENST00000563836 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.45□□□□□ -1.54
SMG1-209ENST00000563836 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
SMG1-209ENST00000563836 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
SMG1-209ENST00000563836 CEND1Q8N111 149 aa5.45□□□□□ -1.54
SMG1-209ENST00000563836 C2orf48Q96LS8 159 aa5.45□□□□□ -1.54
SMG1-209ENST00000563836 ERG28Q9UKR5 140 aa5.45□□□□□ -1.54
SMG1-209ENST00000563836 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
SMG1-209ENST00000563836 PFN2P35080 140 aa5.44□□□□□ -1.54
SMG1-209ENST00000563836 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms