RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 SCGB3A1Q96QR1 104 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 VCX2Q9H322 139 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 A0A096LNI7 61 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 LINC01546A6NGU7 62 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 C5orf52A6NGY3 159 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 K7EMI3 77 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 UBE2D1P51668 147 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 SNRPEP62304 92 aaKnown RBP3.68□□□□□ -1.82
CDH13-206ENST00000562601 SPAG11BQ08648 103 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 PMCHL1Q16048 86 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 GAGE2AQ6NT46 116 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 Q6ZN92 141 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 Q6ZRU5 148 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 CARD19Q96LW7 228 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 YPEL4Q96NS1 127 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 CAMK2N2Q96S95 79 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 AMELXQ99217 191 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 C2orf88Q9BSF0 95 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 SMCO4Q9NRQ5 59 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
CDH13-206ENST00000562601 A0A087WYN8 130 aa3.67□□□□□ -1.82
CDH13-206ENST00000562601 APOMO95445 188 aa3.67□□□□□ -1.82
CDH13-206ENST00000562601 ERASQ7Z444 233 aa3.67□□□□□ -1.82
CDH13-206ENST00000562601 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
CDH13-206ENST00000562601 SPACA4Q8TDM5 124 aa3.67□□□□□ -1.82
CDH13-206ENST00000562601 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
CDH13-206ENST00000562601 HERC1Q15751 4861 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
CDH13-206ENST00000562601 A0A087WZ39 114 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 LINC00614P0C842 121 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 G0S2P27469 103 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 NDUFA6P56556 154 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
CDH13-206ENST00000562601 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
CDH13-206ENST00000562601 C2orf82Q6UX34 121 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 UNQ6190/PRO20217Q6UXQ8 127 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 STPG4Q8N801 248 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 OR10D4PQ8NGN7 298 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 C2orf48Q96LS8 159 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 TIMM17AQ99595 171 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 CST9LQ9H4G1 147 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 TOMM7Q9P0U1 55 aa3.66□□□□□ -1.82
CDH13-206ENST00000562601 A0A096LNJ9 63 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.65□□□□□ -1.83
CDH13-206ENST00000562601 SCO1O75880 301 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 TRGC2P03986 189 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
CDH13-206ENST00000562601 RPL37AP61513 92 aaKnown RBP3.65□□□□□ -1.83
CDH13-206ENST00000562601 KIAA0087Q14695 138 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 C9orf116Q5BN46 136 aaPredicted RBP3.65□□□□□ -1.83
CDH13-206ENST00000562601 PAPPA-AS1Q5QFB9 102 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 GEMIN7Q9H840 131 aaKnown RBP3.65□□□□□ -1.83
CDH13-206ENST00000562601 CDKN2A-AS1Q9UH64 79 aa3.65□□□□□ -1.83
CDH13-206ENST00000562601 A0A1W2PNN7 141 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 COLCA2A8K830 154 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 NDUFA1O15239 70 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 HBDP02042 147 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 SPINK8P0C7L1 97 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 RAB5BP61020 215 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 HERVK_113P63121 156 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 PMVKQ15126 192 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 PDZD11Q5EBL8 140 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 LINC00469Q8N7U9 141 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 PLAC8Q9NZF1 115 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
CDH13-206ENST00000562601 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
CDH13-206ENST00000562601 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
CDH13-206ENST00000562601 HNRNPA3P51991 378 aaKnown RBP3.63□□□□□ -1.83
CDH13-206ENST00000562601 C6orf226Q5I0X4 101 aa3.63□□□□□ -1.83
CDH13-206ENST00000562601 BAGE3Q86Y29 109 aa3.63□□□□□ -1.83
CDH13-206ENST00000562601 FAM19A2Q8N3H0 131 aa3.63□□□□□ -1.83
CDH13-206ENST00000562601 PACRGQ96M98 296 aaPredicted RBP3.63□□□□□ -1.83
CDH13-206ENST00000562601 MRPL35Q9NZE8 188 aaKnown RBP3.63□□□□□ -1.83
CDH13-206ENST00000562601 LINC01549A6NIU2 74 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 SMIM1B2RUZ4 78 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 NUPR1O60356 82 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 CKS1BP61024 79 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 SEC11AP67812 179 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 Q6ZRP5 223 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 LINC00474Q9P2X8 69 aa3.62□□□□□ -1.83
CDH13-206ENST00000562601 IGLV5-45A0A087WSX0 123 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 TRBV30A0A0K0K1B3 111 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 F8WDY8 70 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 H0Y8G0 127 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 SERF1AO75920 110 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 ATP5LO75964 103 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms