RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 CST9LQ9H4G1 147 aa14.75□□□□□ -0.05
CDR2-202ENST00000561630 GAGE2DQ9UEU5 116 aa14.75□□□□□ -0.05
CDR2-202ENST00000561630 TINCRA0A1B0GVN0 87 aa14.74□□□□□ -0.05
CDR2-202ENST00000561630 NDUFC2-KCTD14E9PQ53 114 aa14.74□□□□□ -0.05
CDR2-202ENST00000561630 MT1HL1P0DM35 61 aa14.74□□□□□ -0.05
CDR2-202ENST00000561630 CKS1BP61024 79 aa14.74□□□□□ -0.05
CDR2-202ENST00000561630 PHF5AQ7RTV0 110 aaKnown RBP14.74□□□□□ -0.05
CDR2-202ENST00000561630 FAM168BA1KXE4 195 aa14.73□□□□□ -0.05
CDR2-202ENST00000561630 LINC00469Q8N7U9 141 aa14.73□□□□□ -0.05
CDR2-202ENST00000561630 C18orf32Q8TCD1 76 aa14.73□□□□□ -0.05
CDR2-202ENST00000561630 SRSF9Q13242 221 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDR2-202ENST00000561630 PMVKQ15126 192 aa14.72□□□□□ -0.05
CDR2-202ENST00000561630 SPINK6Q6UWN8 80 aa14.72□□□□□ -0.05
CDR2-202ENST00000561630 IGLV5-45A0A087WSX0 123 aa14.71□□□□□ -0.05
CDR2-202ENST00000561630 SERTAD4-AS1Q5TG53 156 aa14.71□□□□□ -0.05
CDR2-202ENST00000561630 URB1-AS1Q96HZ7 61 aa14.71□□□□□ -0.05
CDR2-202ENST00000561630 PSORS1C2Q9UIG4 136 aa14.71□□□□□ -0.05
CDR2-202ENST00000561630 A0A096LNJ9 63 aa14.7□□□□□ -0.06
CDR2-202ENST00000561630 LINC00614P0C842 121 aa14.7□□□□□ -0.06
CDR2-202ENST00000561630 SMIM1B2RUZ4 78 aa14.69□□□□□ -0.06
CDR2-202ENST00000561630 YPEL4Q96NS1 127 aa14.69□□□□□ -0.06
CDR2-202ENST00000561630 PDZD11Q5EBL8 140 aa14.68□□□□□ -0.06
CDR2-202ENST00000561630 FAM19A5Q7Z5A7 132 aaPredicted RBP14.68□□□□□ -0.06
CDR2-202ENST00000561630 KRTAP7-1Q8IUC3 87 aa14.68□□□□□ -0.06
CDR2-202ENST00000561630 F8VRH5 84 aa14.67□□□□□ -0.06
CDR2-202ENST00000561630 C9orf129Q5T035 196 aaKnown RBP14.67□□□□□ -0.06
CDR2-202ENST00000561630 TNXBP22105 4242 aa14.66□□□□□ -0.06
CDR2-202ENST00000561630 CXCL5P42830 114 aa14.66□□□□□ -0.06
CDR2-202ENST00000561630 LINC01600Q96MT4 127 aa14.66□□□□□ -0.06
CDR2-202ENST00000561630 HBDP02042 147 aa14.65□□□□□ -0.06
CDR2-202ENST00000561630 RAB5BP61020 215 aa14.64□□□□□ -0.07
CDR2-202ENST00000561630 C1orf137Q5JT78 98 aa14.64□□□□□ -0.07
CDR2-202ENST00000561630 PMCHL1Q16048 86 aa14.63□□□□□ -0.07
CDR2-202ENST00000561630 REG3GQ6UW15 175 aa14.63□□□□□ -0.07
CDR2-202ENST00000561630 COX7B2Q8TF08 81 aa14.63□□□□□ -0.07
CDR2-202ENST00000561630 M0QXV9 152 aa14.62□□□□□ -0.07
CDR2-202ENST00000561630 SPINK8P0C7L1 97 aa14.62□□□□□ -0.07
CDR2-202ENST00000561630 KRTAP11-1Q8IUC1 163 aa14.62□□□□□ -0.07
CDR2-202ENST00000561630 H3BRM9 83 aa14.61□□□□□ -0.07
CDR2-202ENST00000561630 IGLC3P0DOY3 106 aa14.61□□□□□ -0.07
CDR2-202ENST00000561630 NDUFA6P56556 154 aa14.6□□□□□ -0.07
CDR2-202ENST00000561630 XAGE1AQ9HD64 81 aa14.59□□□□□ -0.07
CDR2-202ENST00000561630 ATP5LO75964 103 aa14.58□□□□□ -0.08
CDR2-202ENST00000561630 IGLV7-43P04211 117 aa14.57□□□□□ -0.08
CDR2-202ENST00000561630 CBLN2Q8IUK8 224 aa14.57□□□□□ -0.08
CDR2-202ENST00000561630 UBE2BP63146 152 aa14.56□□□□□ -0.08
CDR2-202ENST00000561630 IGLV5-39A0A0G2JS06 123 aa14.55□□□□□ -0.08
CDR2-202ENST00000561630 ZNF22P17026 224 aaPredicted RBP14.55□□□□□ -0.08
CDR2-202ENST00000561630 CHCHD1Q96BP2 118 aaKnown RBP14.55□□□□□ -0.08
CDR2-202ENST00000561630 BAGE3Q86Y29 109 aa14.54□□□□□ -0.08
CDR2-202ENST00000561630 PLA2G2DQ9UNK4 145 aa14.54□□□□□ -0.08
CDR2-202ENST00000561630 KRTAP10-8P60410 259 aa14.53□□□□□ -0.08
CDR2-202ENST00000561630 ODF1Q14990 250 aa14.53□□□□□ -0.08
CDR2-202ENST00000561630 C22orf24Q9Y442 160 aa14.53□□□□□ -0.08
CDR2-202ENST00000561630 SLC7A5P1Q8MH63 180 aa14.51□□□□□ -0.09
CDR2-202ENST00000561630 DIRC1Q969H9 104 aa14.51□□□□□ -0.09
CDR2-202ENST00000561630 C11orf86A6NJI1 115 aa14.5□□□□□ -0.09
CDR2-202ENST00000561630 LBHQ53QV2 105 aaPredicted RBP14.49□□□□□ -0.09
CDR2-202ENST00000561630 TP73-AS1Q9UF72 201 aa14.49□□□□□ -0.09
CDR2-202ENST00000561630 CHTOPQ9Y3Y2 248 aaKnown RBP14.47□□□□□ -0.09
CDR2-202ENST00000561630 H0Y9J4 135 aa14.46□□□□□ -0.09
CDR2-202ENST00000561630 TMEM170BQ5T4T1 132 aa14.46□□□□□ -0.09
CDR2-202ENST00000561630 MRPL55Q7Z7F7 128 aaKnown RBP14.46□□□□□ -0.09
CDR2-202ENST00000561630 TRAV12-1A0A0B4J245 112 aa14.45□□□□□ -0.1
CDR2-202ENST00000561630 TRGC2P03986 189 aa14.45□□□□□ -0.1
CDR2-202ENST00000561630 IFI27L1Q96BM0 104 aa14.45□□□□□ -0.1
CDR2-202ENST00000561630 UBR4Q5T4S7 5183 aa14.43□□□□□ -0.1
CDR2-202ENST00000561630 HSBP1O75506 76 aa14.43□□□□□ -0.1
CDR2-202ENST00000561630 NUPR1O60356 82 aa14.42□□□□□ -0.1
CDR2-202ENST00000561630 PFN2P35080 140 aa14.42□□□□□ -0.1
CDR2-202ENST00000561630 FAM19A2Q8N3H0 131 aa14.41□□□□□ -0.1
CDR2-202ENST00000561630 IGLV5-37A0A075B6J1 123 aa14.4□□□□□ -0.1
CDR2-202ENST00000561630 SFTA2Q6UW10 78 aa14.4□□□□□ -0.1
CDR2-202ENST00000561630 ERG28Q9UKR5 140 aa14.4□□□□□ -0.1
CDR2-202ENST00000561630 COX17Q14061 63 aa14.39□□□□□ -0.11
CDR2-202ENST00000561630 LINC00167Q96N53 147 aa14.39□□□□□ -0.11
CDR2-202ENST00000561630 TMEM223A0PJW6 202 aa14.38□□□□□ -0.11
CDR2-202ENST00000561630 ZNF861PO60384 105 aa14.38□□□□□ -0.11
CDR2-202ENST00000561630 ZNF625Q96I27 306 aaPredicted RBP14.38□□□□□ -0.11
CDR2-202ENST00000561630 COLCA2A8K830 154 aa14.37□□□□□ -0.11
CDR2-202ENST00000561630 LINC00310P59036 64 aa14.36□□□□□ -0.11
CDR2-202ENST00000561630 NKAPP1Q8N9T2 125 aa14.36□□□□□ -0.11
CDR2-202ENST00000561630 SND1-IT1Q9HBX3 110 aa14.36□□□□□ -0.11
CDR2-202ENST00000561630 RPL37AP8A6NKH3 93 aa14.35□□□□□ -0.11
CDR2-202ENST00000561630 SERF1AO75920 110 aa14.35□□□□□ -0.11
CDR2-202ENST00000561630 KRTAP1-4P0C5Y4 121 aa14.35□□□□□ -0.11
CDR2-202ENST00000561630 PRR26Q8N8Z3 221 aa14.35□□□□□ -0.11
CDR2-202ENST00000561630 GAGE10A6NGK3 116 aa14.34□□□□□ -0.11
CDR2-202ENST00000561630 BCE1O60756 84 aa14.33□□□□□ -0.12
CDR2-202ENST00000561630 LEPROTL1O95214 131 aa14.32□□□□□ -0.12
CDR2-202ENST00000561630 IGLV1-50A0A075B6I6 118 aa14.31□□□□□ -0.12
CDR2-202ENST00000561630 VPREB1P12018 145 aa14.3□□□□□ -0.12
CDR2-202ENST00000561630 RPL28P46779 137 aaKnown RBP14.29□□□□□ -0.12
CDR2-202ENST00000561630 H0Y8G0 127 aa14.28□□□□□ -0.12
CDR2-202ENST00000561630 SCO1O75880 301 aa14.28□□□□□ -0.12
CDR2-202ENST00000561630 RPL24P83731 157 aaKnown RBP14.28□□□□□ -0.12
CDR2-202ENST00000561630 LRP2P98164 4655 aa14.27□□□□□ -0.12
CDR2-202ENST00000561630 LINC00158P58513 81 aa14.27□□□□□ -0.13
CDR2-202ENST00000561630 HSPB8Q9UJY1 196 aa14.27□□□□□ -0.13
CDR2-202ENST00000561630 IGKV2-28A0A075B6P5 120 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms