RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.5
PALB2-202ENST00000561514 C9orf85Q96MD7 179 aa5.65□□□□□ -1.5
PALB2-202ENST00000561514 LAMTOR3Q9UHA4 124 aa5.65□□□□□ -1.5
PALB2-202ENST00000561514 A0A096LNJ9 63 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 LRCOL1A6NCL2 159 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 FCER1GP30273 86 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 MIR17HGQ75NE6 70 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
PALB2-202ENST00000561514 TRGV11A0A075B6L2 103 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 TRAV13-1A0A0B4J241 112 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 TRAV12-1A0A0B4J245 112 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 H3BVH4 76 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 TCL1BO95988 128 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 GYPEP15421 78 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 MRPS36P82909 103 aaKnown RBP5.63□□□□□ -1.51
PALB2-202ENST00000561514 LINC01556Q5JQF7 62 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 ZC2HC1BQ5TFG8 222 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 C1orf195Q5TG92 126 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 Q5XG85 94 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 PAXXQ9BUH6 204 aa5.63□□□□□ -1.51
PALB2-202ENST00000561514 TRGV4A0A0C4DH28 118 aa5.62□□□□□ -1.51
PALB2-202ENST00000561514 IBA57-AS1B1ANH7 110 aa5.62□□□□□ -1.51
PALB2-202ENST00000561514 GATA1P15976 413 aaPredicted RBP5.62□□□□□ -1.51
PALB2-202ENST00000561514 PAPPA-AS1Q5QFB9 102 aa5.62□□□□□ -1.51
PALB2-202ENST00000561514 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
PALB2-202ENST00000561514 PRO1854Q9UHT4 67 aa5.62□□□□□ -1.51
PALB2-202ENST00000561514 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
PALB2-202ENST00000561514 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.61□□□□□ -1.51
PALB2-202ENST00000561514 IGHV3-16A0A0C4DH30 117 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 K7EMI3 77 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 PRSS1P07477 247 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 PFN2P35080 140 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 IFI27P40305 119 aaPredicted RBP5.61□□□□□ -1.51
PALB2-202ENST00000561514 FAM104BQ5XKR9 115 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 HRCT1Q6UXD1 115 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 Q6ZSA8 131 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 Q6ZSN1 163 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
PALB2-202ENST00000561514 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 A0A0B4J2C4 111 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 IGHV3-38A0A0C4DH36 116 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 J3QQQ9 107 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 SMR3BP02814 79 aaPredicted RBP5.6□□□□□ -1.51
PALB2-202ENST00000561514 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
PALB2-202ENST00000561514 LAGE3Q14657 143 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 ZNF56Q15929 161 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 LINC01620Q4KN68 170 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 Q8N814 137 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 OTORQ9NRC9 128 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 PYGO1Q9Y3Y4 419 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
PALB2-202ENST00000561514 TRAV21A0A0B4J279 112 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 LOC100131303A0A0U1RQF7 123 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 TRBV6-4A0A1B0GX49 114 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 F8VRH5 84 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 H7C1H1 209 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 COX6CP09669 75 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 HERVK_113P61574 105 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 NPC2P61916 151 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 SRSF9Q13242 221 aaKnown RBP eCLIP5.59□□□□□ -1.51
PALB2-202ENST00000561514 C5orf38Q86SI9 138 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 SERP2Q8N6R1 65 aa5.59□□□□□ -1.51
PALB2-202ENST00000561514 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 TRBV30A0A0K0K1B3 111 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 PGPA6NDG6 321 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 KRTAP29-1A8MX34 341 aaPredicted RBP5.58□□□□□ -1.52
PALB2-202ENST00000561514 ATP5EP56381 51 aaPredicted RBP5.58□□□□□ -1.52
PALB2-202ENST00000561514 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 LELP1Q5T871 98 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
PALB2-202ENST00000561514 D6R8Y8 96 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 GNRH2O43555 120 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 HAMPP81172 84 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 RHOHQ15669 191 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 ZFP2Q6ZN57 461 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 SLC25A29Q8N8R3 303 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 C2orf48Q96LS8 159 aa5.57□□□□□ -1.52
PALB2-202ENST00000561514 PSCAO43653 123 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 BCE1O60756 84 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 CFC1BP0CG36 223 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 CFC1P0CG37 223 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 CKS2P33552 79 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 RPL18AQ02543 176 aaKnown RBP5.56□□□□□ -1.52
PALB2-202ENST00000561514 PIK3CD-AS1Q5SR53 167 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 Q8N8P6 123 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 DAND5Q8N907 189 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 C11orf21Q9P2W6 132 aa5.56□□□□□ -1.52
PALB2-202ENST00000561514 TMSB15BA0A087X1C1 80 aa5.55□□□□□ -1.52
PALB2-202ENST00000561514 TCRAP04437 139 aa5.55□□□□□ -1.52
PALB2-202ENST00000561514 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
PALB2-202ENST00000561514 ZNF876PQ49A33 203 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms