RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 I3L3M4 83 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 PEX7O00628 323 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 NDUFB6O95139 128 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 PVALBP20472 110 aaPredicted RBP1.8□□□□□ -2.12
HERC1-211ENST00000560983 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 SSBP3-AS1Q7Z2R9 100 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 FAM19A1Q7Z5A9 133 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 FUNDC2Q9BWH2 189 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 RNASE7Q9H1E1 156 aaKnown RBP1.8□□□□□ -2.12
HERC1-211ENST00000560983 CSDC2Q9Y534 153 aaKnown RBP1.8□□□□□ -2.12
HERC1-211ENST00000560983 IGKV2-28A0A075B6P5 120 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 FAM25EA8MYX2 175 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 M0R378 163 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 RGS5O15539 181 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 SCO1O75880 301 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 IGKV2D-28P01615 120 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 IGLC6P0CF74 106 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 PMCHP20382 165 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
HERC1-211ENST00000560983 LINC00483Q53H64 154 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 HIST1H2BAQ96A08 127 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 MRAP2Q96G30 205 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 C20orf166-AS1Q96NR2 134 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 TMEM126AQ9H061 195 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 GEMIN7Q9H840 131 aaKnown RBP1.79□□□□□ -2.12
HERC1-211ENST00000560983 RAB26Q9ULW5 256 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
HERC1-211ENST00000560983 TRBV6-5A0A0K0K1A5 114 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 INMT-MINDY4F8WBC2 141 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 MOBPQ13875 183 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 TOMM5Q8N4H5 51 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 FMC1Q96HJ9 113 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 HIGD2AQ9BW72 106 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 TMEM167BQ9NRX6 74 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 TMEM242Q9NWH2 141 aa1.78□□□□□ -2.12
HERC1-211ENST00000560983 FAM74A7A6NL05 159 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 CXorf1O96002 111 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 SPRR2DP22532 72 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 CDC34P49427 236 aaPredicted RBP1.77□□□□□ -2.13
HERC1-211ENST00000560983 POLR2KP53803 58 aaKnown RBP1.77□□□□□ -2.13
HERC1-211ENST00000560983 DEFA1P59665 94 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 AP3S2P59780 193 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 Q6ZUT4 128 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 LINC01551Q86U37 167 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 SCGB1C1Q8TD33 95 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 DEDD2Q8WXF8 326 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 CCDC32Q9BV29 185 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 TPPP3Q9BW30 176 aa1.77□□□□□ -2.13
HERC1-211ENST00000560983 TRBV27A0A0K0K1C4 114 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 C7orf77A4D0Y5 90 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 F2Z2F3 143 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 TRGC1P0CF51 173 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 FAM231DQ6ZW35 169 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 FAM210AQ96ND0 272 aa1.76□□□□□ -2.13
HERC1-211ENST00000560983 NKX6-2Q9C056 277 aaPredicted RBP1.76□□□□□ -2.13
HERC1-211ENST00000560983 ZNF706Q9Y5V0 76 aaPredicted RBP1.76□□□□□ -2.13
HERC1-211ENST00000560983 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 NOL3O60936 208 aaKnown RBP1.75□□□□□ -2.13
HERC1-211ENST00000560983 IFNA1P01562 189 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 ATP6V0CP27449 155 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 BTCP35070 178 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 UBE2G1P62253 170 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 ZNF726P1Q15940 193 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 C9orf62Q8N4C0 152 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 SMCR5Q8TEV8 140 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 TIMM21Q9BVV7 248 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 SMIM3Q9BZL3 60 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 HSPB11Q9Y547 144 aa1.75□□□□□ -2.13
HERC1-211ENST00000560983 RAB19A4D1S5 217 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 SIX6O95475 246 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 FHITP49789 147 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 PYDC2Q56P42 97 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 BAGE2Q86Y30 109 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 LINC01561Q8N1V8 128 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 NKAPP1Q8N9T2 125 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 SEC22CQ9BRL7 303 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 CNFNQ9BYD5 112 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 ST20Q9HBF5 79 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 MED9Q9NWA0 146 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 V9GYH0 126 aa1.74□□□□□ -2.13
HERC1-211ENST00000560983 TGIF2-C20orf24A0A0A6YYL0 155 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 MT1BP07438 61 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 CKS1BP61024 79 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 C6orf226Q5I0X4 101 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 ATP11AUNQ6ZP68 121 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 FAM19A3Q7Z5A8 133 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 Q8NDZ9 215 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 ACTR3CQ9C0K3 210 aaPredicted RBP1.73□□□□□ -2.13
HERC1-211ENST00000560983 VCX3BQ9H321 246 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 DHRS4-AS1Q9P1J3 65 aa1.73□□□□□ -2.13
HERC1-211ENST00000560983 TRBV20-1A0A075B6N2 111 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 A0A087WXM4 84 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 NAP1L6A6NFF2 107 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 F8VRH5 84 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 ERC2-IT1O76042 136 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 MBP02144 154 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 S100A9P06702 114 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms