RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 LINC00643Q86TS7 51 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 LRRC75A-AS1Q8N1F1 130 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 SMCR5Q8TEV8 140 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 NRGNQ92686 78 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 C16orf74Q96GX8 76 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 FAM218AQ96MZ4 157 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 LINC01587Q99440 93 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 TMEM243Q9BU79 118 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 CDC42SE2Q9NRR3 84 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 SS18L2Q9UHA2 77 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 AKAP9Q99996 3911 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 ZFHX3Q15911 3703 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 A0A087WZ39 114 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 TRGV1A0A0A0MS02 117 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 TRAV13-1A0A0B4J241 112 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 IGHV3OR16-9A0A0B4J2B5 98 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 FAM236AA0A1B0GUQ0 79 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 FAM236BA0A1B0GV22 79 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 IBA57-AS1B1ANH7 110 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 NDUFA7O95182 113 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 PRM2P04554 102 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 CMC4P56277 68 aaPredicted RBP1.69□□□□□ -2.14
SPG11-223ENST00000560858 HIST2H2BDQ6DRA6 164 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 DGAT2L7PQ6IED9 249 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 Q6JHZ5 121 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 Q6ZTI0 123 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 STHQ8IWL8 128 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 LINC01561Q8N1V8 128 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 LINC00337Q8N6G1 96 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 LINC00612Q8N6U2 182 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 CSNK1G2-AS1Q8NCQ2 148 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 COX7B2Q8TF08 81 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 LINC00167Q96N53 147 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 XCL2Q9UBD3 114 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 PKD1L2Q7Z442 2459 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 CACNA1AO00555 2505 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 NCOR2Q9Y618 2525 aa1.69□□□□□ -2.14
SPG11-223ENST00000560858 USP9XQ93008 2570 aaPredicted RBP1.68□□□□□ -2.14
SPG11-223ENST00000560858 CREBBPQ92793 2442 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 CELSR1Q9NYQ6 3014 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 IGLV4-60A0A075B6I1 120 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 A0A0A0MQY5 61 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 TRBV6-8A0A0A6YYG3 113 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 LOC100131303A0A0U1RQF7 123 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 A0A1B0GX51 115 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 H0YGX0 51 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 CCL24O00175 119 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 UBE2L6O14933 153 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 UQCRQO14949 82 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 IGLV1-51P01701 117 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 BAALC-AS2P0C853 105 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 HTN1P15515 57 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 CCL18P55774 89 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 SS18Q15532 418 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 DEFB113Q30KQ7 82 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 ATP5EP2Q5VTU8 51 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 NOTCH2NLQ7Z3S9 236 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 Q8IZM0 81 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 MIR7-3HGQ8N6C7 128 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 KIR2DL5BQ8NHK3 375 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 SMIM11BQ8TCY0 68 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 TMEM126AQ9H061 195 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 C16orf95Q9H693 158 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 SND1-IT1Q9HBX3 110 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 KLK5Q9Y337 293 aaPredicted RBP1.68□□□□□ -2.14
SPG11-223ENST00000560858 VPS13CQ709C8 3753 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 RELNP78509 3460 aa1.68□□□□□ -2.14
SPG11-223ENST00000560858 SPTBN4Q9H254 2564 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 ITPR1Q14643 2758 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 SPG11Q96JI7 2443 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 ASH1LQ9NR48 2969 aaKnown RBP1.67□□□□□ -2.14
SPG11-223ENST00000560858 A0A0U1RRA0 63 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 LINC00959A0A1B0GUT2 108 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 ATOX1O00244 68 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 NDUFC2O95298 119 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 DNAL4O96015 105 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 CRYGAP11844 174 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 COX7CP15954 63 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 C9orf129Q5T035 196 aaKnown RBP1.67□□□□□ -2.14
SPG11-223ENST00000560858 C3orf22Q8N5N4 141 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 MUC7Q8TAX7 377 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 LINC00526Q96FQ7 95 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 C2orf48Q96LS8 159 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 CHCHD5Q9BSY4 110 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 WFDC10AQ9H1F0 79 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 NOP10Q9NPE3 64 aaKnown RBP1.67□□□□□ -2.14
SPG11-223ENST00000560858 ESM1Q9NQ30 184 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 WNK1Q9H4A3 2382 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 FBN2P35556 2912 aa1.67□□□□□ -2.14
SPG11-223ENST00000560858 CHD8Q9HCK8 2581 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 LECT2O14960 151 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 LINC00158P58513 81 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 RPL18AQ02543 176 aaKnown RBP1.66□□□□□ -2.14
SPG11-223ENST00000560858 COX17Q14061 63 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 C9orf153Q5TBE3 101 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 GAGE2AQ6NT46 116 aa1.66□□□□□ -2.14
SPG11-223ENST00000560858 SMIM20Q8N5G0 67 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms