RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 COX6A2Q02221 97 aa9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 TLN1Q9Y490 2541 aaKnown RBP9.47□□□□□ -0.89
CSPG4P11-201ENST00000560634 C6orf223Q8N319 242 aa9.46□□□□□ -0.89
CSPG4P11-201ENST00000560634 FHL2Q14192 279 aa9.46□□□□□ -0.9
CSPG4P11-201ENST00000560634 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
CSPG4P11-201ENST00000560634 A0A096LNJ9 63 aa9.45□□□□□ -0.9
CSPG4P11-201ENST00000560634 AVPP01185 164 aa9.45□□□□□ -0.9
CSPG4P11-201ENST00000560634 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
CSPG4P11-201ENST00000560634 LY6G6CO95867 125 aa9.44□□□□□ -0.9
CSPG4P11-201ENST00000560634 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
CSPG4P11-201ENST00000560634 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
CSPG4P11-201ENST00000560634 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
CSPG4P11-201ENST00000560634 NUPR2A6NF83 97 aa9.43□□□□□ -0.9
CSPG4P11-201ENST00000560634 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
CSPG4P11-201ENST00000560634 CHD8Q9HCK8 2581 aa9.43□□□□□ -0.9
CSPG4P11-201ENST00000560634 ABCA12Q86UK0 2595 aa9.42□□□□□ -0.9
CSPG4P11-201ENST00000560634 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
CSPG4P11-201ENST00000560634 USP9XQ93008 2570 aaPredicted RBP9.41□□□□□ -0.9
CSPG4P11-201ENST00000560634 A0A087WSZ3 146 aa9.41□□□□□ -0.9
CSPG4P11-201ENST00000560634 Q9BRP9 147 aa9.41□□□□□ -0.9
CSPG4P11-201ENST00000560634 TLN2Q9Y4G6 2542 aa9.41□□□□□ -0.9
CSPG4P11-201ENST00000560634 hDV103S1A0JD37 113 aa9.41□□□□□ -0.9
CSPG4P11-201ENST00000560634 CIRBP-AS1Q8TBR5 109 aa9.4□□□□□ -0.9
CSPG4P11-201ENST00000560634 EDN2P20800 178 aa9.39□□□□□ -0.91
CSPG4P11-201ENST00000560634 KIAA1549LQ6ZVL6 1849 aa9.39□□□□□ -0.91
CSPG4P11-201ENST00000560634 H0Y9P7 68 aa9.39□□□□□ -0.91
CSPG4P11-201ENST00000560634 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
CSPG4P11-201ENST00000560634 LINC00846Q9NV44 126 aa9.39□□□□□ -0.91
CSPG4P11-201ENST00000560634 FN1P02751 2386 aaKnown RBP9.38□□□□□ -0.91
CSPG4P11-201ENST00000560634 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
CSPG4P11-201ENST00000560634 CXCL6P80162 114 aa9.38□□□□□ -0.91
CSPG4P11-201ENST00000560634 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
CSPG4P11-201ENST00000560634 Q8N2B8 174 aa9.37□□□□□ -0.91
CSPG4P11-201ENST00000560634 PRO0628Q9UI54 55 aa9.37□□□□□ -0.91
CSPG4P11-201ENST00000560634 Q6ZTC4 211 aa9.37□□□□□ -0.91
CSPG4P11-201ENST00000560634 HCG22E2RYF7 251 aa9.36□□□□□ -0.91
CSPG4P11-201ENST00000560634 C16orf95Q9H693 158 aa9.36□□□□□ -0.91
CSPG4P11-201ENST00000560634 NUP210LQ5VU65 1888 aa9.36□□□□□ -0.91
CSPG4P11-201ENST00000560634 BCE1O60756 84 aa9.36□□□□□ -0.91
CSPG4P11-201ENST00000560634 EML5Q05BV3 1969 aa9.35□□□□□ -0.91
CSPG4P11-201ENST00000560634 CDSNQ15517 529 aa9.35□□□□□ -0.91
CSPG4P11-201ENST00000560634 PSPHP1O15172 72 aa9.35□□□□□ -0.91
CSPG4P11-201ENST00000560634 MUC4Q99102 2169 aa9.35□□□□□ -0.91
CSPG4P11-201ENST00000560634 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
CSPG4P11-201ENST00000560634 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.92
CSPG4P11-201ENST00000560634 Q6ZSN1 163 aa9.34□□□□□ -0.92
CSPG4P11-201ENST00000560634 CDIP1Q9H305 208 aa9.34□□□□□ -0.92
CSPG4P11-201ENST00000560634 PKD1L2Q7Z442 2459 aa9.33□□□□□ -0.92
CSPG4P11-201ENST00000560634 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
CSPG4P11-201ENST00000560634 LIMD2Q9BT23 127 aa9.33□□□□□ -0.92
CSPG4P11-201ENST00000560634 LINC01556Q5JQF7 62 aa9.33□□□□□ -0.92
CSPG4P11-201ENST00000560634 ATG2AQ2TAZ0 1938 aa9.33□□□□□ -0.92
CSPG4P11-201ENST00000560634 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
CSPG4P11-201ENST00000560634 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
CSPG4P11-201ENST00000560634 RETNQ9HD89 108 aa9.32□□□□□ -0.92
CSPG4P11-201ENST00000560634 SETD2Q9BYW2 2564 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P11-201ENST00000560634 CRYGAP11844 174 aa9.32□□□□□ -0.92
CSPG4P11-201ENST00000560634 RPS28P62857 69 aaKnown RBP9.31□□□□□ -0.92
CSPG4P11-201ENST00000560634 A0A1B0GW54 56 aa9.3□□□□□ -0.92
CSPG4P11-201ENST00000560634 Q6ZRU5 148 aa9.3□□□□□ -0.92
CSPG4P11-201ENST00000560634 UTRNP46939 3433 aa9.3□□□□□ -0.92
CSPG4P11-201ENST00000560634 F8P00451 2351 aa9.29□□□□□ -0.92
CSPG4P11-201ENST00000560634 AGRNO00468 2067 aa9.29□□□□□ -0.92
CSPG4P11-201ENST00000560634 LINC01546A6NGU7 62 aa9.29□□□□□ -0.92
CSPG4P11-201ENST00000560634 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
CSPG4P11-201ENST00000560634 USP9YO00507 2555 aaPredicted RBP9.29□□□□□ -0.92
CSPG4P11-201ENST00000560634 X6R8D5 127 aa9.29□□□□□ -0.92
CSPG4P11-201ENST00000560634 IGHV3OR16-9A0A0B4J2B5 98 aa9.28□□□□□ -0.92
CSPG4P11-201ENST00000560634 SPINK1P00995 79 aa9.28□□□□□ -0.92
CSPG4P11-201ENST00000560634 MUC22E2RYF6 1773 aaPredicted RBP9.28□□□□□ -0.92
CSPG4P11-201ENST00000560634 SMCR5Q8TEV8 140 aa9.27□□□□□ -0.93
CSPG4P11-201ENST00000560634 A8MTW9 85 aa9.26□□□□□ -0.93
CSPG4P11-201ENST00000560634 DEFB116Q30KQ4 102 aa9.26□□□□□ -0.93
CSPG4P11-201ENST00000560634 TP53AIP1Q9HCN2 124 aa9.26□□□□□ -0.93
CSPG4P11-201ENST00000560634 PLA2G2AP14555 144 aa9.26□□□□□ -0.93
CSPG4P11-201ENST00000560634 KRTAP10-9P60411 292 aa9.26□□□□□ -0.93
CSPG4P11-201ENST00000560634 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
CSPG4P11-201ENST00000560634 FSHBP01225 129 aa9.25□□□□□ -0.93
CSPG4P11-201ENST00000560634 SBSPONQ8IVN8 264 aa9.25□□□□□ -0.93
CSPG4P11-201ENST00000560634 SPATA3Q8NHX4 192 aa9.25□□□□□ -0.93
CSPG4P11-201ENST00000560634 LRRK2Q5S007 2527 aa9.24□□□□□ -0.93
CSPG4P11-201ENST00000560634 A0A1W2PPR1 153 aa9.24□□□□□ -0.93
CSPG4P11-201ENST00000560634 C1orf134Q5TEV5 83 aa9.24□□□□□ -0.93
CSPG4P11-201ENST00000560634 PRLHP81277 87 aa9.24□□□□□ -0.93
CSPG4P11-201ENST00000560634 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
CSPG4P11-201ENST00000560634 CEP192Q8TEP8 1941 aa9.23□□□□□ -0.93
CSPG4P11-201ENST00000560634 SMR3AQ99954 134 aa9.23□□□□□ -0.93
CSPG4P11-201ENST00000560634 RETNLBQ9BQ08 111 aa9.23□□□□□ -0.93
CSPG4P11-201ENST00000560634 CEP295Q9C0D2 2601 aa9.23□□□□□ -0.93
CSPG4P11-201ENST00000560634 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
CSPG4P11-201ENST00000560634 LINC00315P59091 139 aa9.22□□□□□ -0.93
CSPG4P11-201ENST00000560634 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.93
CSPG4P11-201ENST00000560634 H3BPC8 53 aa9.21□□□□□ -0.94
CSPG4P11-201ENST00000560634 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms