RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 PMVKQ15126 192 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 PLEKHB2Q96CS7 222 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 TIMM17AQ99595 171 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 PRADC1Q9BSG0 188 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 NOP10Q9NPE3 64 aaKnown RBP2.99□□□□□ -1.93
TMOD3-207ENST00000560549 HIGD1BQ9P298 99 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 RYR2Q92736 4967 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
TMOD3-207ENST00000560549 MYMXA0A1B0GTQ4 84 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 IGKV2-29A2NJV5 120 aaPredicted RBP2.98□□□□□ -1.93
TMOD3-207ENST00000560549 CCL25O15444 150 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 FXYD2P54710 66 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 CMC4P56277 68 aaPredicted RBP2.98□□□□□ -1.93
TMOD3-207ENST00000560549 HSD52Q0P140 79 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 RNASE13Q5GAN3 156 aaKnown RBP2.98□□□□□ -1.93
TMOD3-207ENST00000560549 NTM-AS1Q6ZSK4 140 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 AMELXQ99217 191 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 NAA38Q9BRA0 125 aaKnown RBP2.98□□□□□ -1.93
TMOD3-207ENST00000560549 CHAC1Q9BUX1 264 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 VWFP04275 2813 aa2.98□□□□□ -1.93
TMOD3-207ENST00000560549 TRBV7-3A0A075B6L6 115 aa2.97□□□□□ -1.93
TMOD3-207ENST00000560549 K7ERJ3 54 aa2.97□□□□□ -1.93
TMOD3-207ENST00000560549 LINC00694P0DN24 101 aa2.97□□□□□ -1.93
TMOD3-207ENST00000560549 ZNF22P17026 224 aaPredicted RBP2.97□□□□□ -1.93
TMOD3-207ENST00000560549 DAZ2Q13117 558 aaKnown RBP2.97□□□□□ -1.93
TMOD3-207ENST00000560549 TMEM263Q8WUH6 116 aaKnown RBP2.97□□□□□ -1.93
TMOD3-207ENST00000560549 UBE2D4Q9Y2X8 147 aa2.97□□□□□ -1.93
TMOD3-207ENST00000560549 SORL1Q92673 2214 aa2.97□□□□□ -1.93
TMOD3-207ENST00000560549 TENM3Q9P273 2699 aa2.97□□□□□ -1.93
TMOD3-207ENST00000560549 TRAV4A0A0B4J268 109 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 TMEM223A0PJW6 202 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.93
TMOD3-207ENST00000560549 H3BRM9 83 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 UBE2D3P61077 147 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 UBE2D2P62837 147 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 SEC11AP67812 179 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 CASC10Q5T4H9 136 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 AMMECR1LQ6DCA0 310 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 Q6ZUT4 128 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 SBSPONQ8IVN8 264 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 CEND1Q8N111 149 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 SLC25A29Q8N8R3 303 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 OR5A1Q8NGJ0 315 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 RAB37Q96AX2 223 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 DNAJC30Q96LL9 226 aa2.96□□□□□ -1.93
TMOD3-207ENST00000560549 HERC2O95714 4834 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 IGLV8-61A0A075B6I0 122 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 IGHV3-64A0A075B6Q5 118 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 LINC01549A6NIU2 74 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 ZNF815PA8K554 130 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 H3BUT2 72 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 LEPROTO15243 131 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 CXCL6P80162 114 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 COX6A2Q02221 97 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 RRN3P1Q2M238 152 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 TTC32Q5I0X7 151 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 TMEM170BQ5T4T1 132 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 LINC00612Q8N6U2 182 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 OR11H2Q8NH07 326 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 C16orf74Q96GX8 76 aa2.96□□□□□ -1.94
TMOD3-207ENST00000560549 TRAV8-3A0A0A6YYJ7 113 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 A0A0J9YY99 117 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 J3QQQ9 107 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 DEFB4AO15263 64 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 CHTF8P0CG12 524 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 SMIM13P0DJ93 91 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 UBE2D1P51668 147 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 RBX1P62877 108 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 MRPS36P82909 103 aaKnown RBP2.95□□□□□ -1.94
TMOD3-207ENST00000560549 REG3AQ06141 175 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 C12orf74Q32Q52 190 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 WFDC9Q8NEX5 89 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 SPANXA1Q9NS26 97 aa2.95□□□□□ -1.94
TMOD3-207ENST00000560549 TRGV2A0A075B6R0 118 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 TRBV10-1A0A0K0K1A3 114 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 IGLL5B9A064 214 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 SPINK8P0C7L1 97 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 IGHV3-30-3P0DP02 117 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 DEFB130BP0DP73 79 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 DEFB130AP0DP74 79 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 CRYBA4P53673 196 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 HERVK_113P61574 105 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 C10orf126Q8N4M7 172 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 VSIG2Q96IQ7 327 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 TIMM21Q9BVV7 248 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 NHP2Q9NX24 153 aaKnown RBP2.94□□□□□ -1.94
TMOD3-207ENST00000560549 CMYA5Q8N3K9 4069 aa2.94□□□□□ -1.94
TMOD3-207ENST00000560549 NACAE9PAV3 2078 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 TRGV4A0A0C4DH28 118 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 TRBV6-4A0A1B0GX49 114 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 A0A1W2PPM0 123 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 IGHV3-30P01768 117 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 IGHV3-30-5P0DP03 117 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 LGALS3P17931 250 aaKnown RBP2.93□□□□□ -1.94
TMOD3-207ENST00000560549 INSL3P51460 131 aa2.93□□□□□ -1.94
TMOD3-207ENST00000560549 DAZ4Q86SG3 579 aaKnown RBP2.93□□□□□ -1.94
TMOD3-207ENST00000560549 DAZ3Q9NR90 486 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms