RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 NMUP48645 174 aa10.47□□□□□ -0.73
CDC42BPB-203ENST00000558867 AMMECR1LQ6DCA0 310 aa10.47□□□□□ -0.73
CDC42BPB-203ENST00000558867 C2orf91Q6ZV80 131 aa10.47□□□□□ -0.73
CDC42BPB-203ENST00000558867 A0A0J9YXV3 536 aa10.46□□□□□ -0.73
CDC42BPB-203ENST00000558867 TMEM223A0PJW6 202 aa10.46□□□□□ -0.73
CDC42BPB-203ENST00000558867 RPL37AP61513 92 aaKnown RBP10.46□□□□□ -0.73
CDC42BPB-203ENST00000558867 CTAG1AP78358 180 aa10.46□□□□□ -0.73
CDC42BPB-203ENST00000558867 FAT3Q8TDW7 4589 aa10.45□□□□□ -0.74
CDC42BPB-203ENST00000558867 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
CDC42BPB-203ENST00000558867 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
CDC42BPB-203ENST00000558867 Q8N3U1 123 aa10.45□□□□□ -0.74
CDC42BPB-203ENST00000558867 HERVK_113P63121 156 aa10.44□□□□□ -0.74
CDC42BPB-203ENST00000558867 TMEM170BQ5T4T1 132 aa10.44□□□□□ -0.74
CDC42BPB-203ENST00000558867 CHCHD5Q9BSY4 110 aa10.44□□□□□ -0.74
CDC42BPB-203ENST00000558867 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
CDC42BPB-203ENST00000558867 LEPROTO15243 131 aa10.43□□□□□ -0.74
CDC42BPB-203ENST00000558867 KLK12Q9UKR0 248 aa10.43□□□□□ -0.74
CDC42BPB-203ENST00000558867 GAGE6Q13070 117 aa10.42□□□□□ -0.74
CDC42BPB-203ENST00000558867 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
CDC42BPB-203ENST00000558867 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
CDC42BPB-203ENST00000558867 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
CDC42BPB-203ENST00000558867 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
CDC42BPB-203ENST00000558867 CCL25O15444 150 aa10.41□□□□□ -0.74
CDC42BPB-203ENST00000558867 LINC00242Q5T6M2 205 aa10.41□□□□□ -0.74
CDC42BPB-203ENST00000558867 GEMIN7Q9H840 131 aaKnown RBP10.41□□□□□ -0.74
CDC42BPB-203ENST00000558867 H3BRM9 83 aa10.4□□□□□ -0.74
CDC42BPB-203ENST00000558867 HSD52Q0P140 79 aa10.4□□□□□ -0.74
CDC42BPB-203ENST00000558867 C1orf43Q9BWL3 253 aa10.4□□□□□ -0.74
CDC42BPB-203ENST00000558867 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
CDC42BPB-203ENST00000558867 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
CDC42BPB-203ENST00000558867 J3QQQ9 107 aa10.39□□□□□ -0.75
CDC42BPB-203ENST00000558867 TAL2Q16559 108 aa10.39□□□□□ -0.75
CDC42BPB-203ENST00000558867 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
CDC42BPB-203ENST00000558867 RBX1P62877 108 aa10.38□□□□□ -0.75
CDC42BPB-203ENST00000558867 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
CDC42BPB-203ENST00000558867 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
CDC42BPB-203ENST00000558867 IGLV5-39A0A0G2JS06 123 aa10.37□□□□□ -0.75
CDC42BPB-203ENST00000558867 CRPP02741 224 aa10.37□□□□□ -0.75
CDC42BPB-203ENST00000558867 MPV17L2Q567V2 206 aa10.37□□□□□ -0.75
CDC42BPB-203ENST00000558867 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
CDC42BPB-203ENST00000558867 ZNF815PA8K554 130 aa10.36□□□□□ -0.75
CDC42BPB-203ENST00000558867 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
CDC42BPB-203ENST00000558867 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
CDC42BPB-203ENST00000558867 BVES-AS1Q5T3Y7 98 aa10.36□□□□□ -0.75
CDC42BPB-203ENST00000558867 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
CDC42BPB-203ENST00000558867 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
CDC42BPB-203ENST00000558867 COX6A2Q02221 97 aa10.35□□□□□ -0.75
CDC42BPB-203ENST00000558867 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
CDC42BPB-203ENST00000558867 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
CDC42BPB-203ENST00000558867 LINC00959A0A1B0GUT2 108 aa10.34□□□□□ -0.75
CDC42BPB-203ENST00000558867 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPB-203ENST00000558867 Q6ZRU5 148 aa10.34□□□□□ -0.75
CDC42BPB-203ENST00000558867 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
CDC42BPB-203ENST00000558867 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPB-203ENST00000558867 IGHV3OR16-9A0A0B4J2B5 98 aa10.32□□□□□ -0.76
CDC42BPB-203ENST00000558867 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
CDC42BPB-203ENST00000558867 ORAOV1Q8WV07 137 aa10.32□□□□□ -0.76
CDC42BPB-203ENST00000558867 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
CDC42BPB-203ENST00000558867 SS18Q15532 418 aa10.31□□□□□ -0.76
CDC42BPB-203ENST00000558867 PRR34Q9NV39 138 aa10.31□□□□□ -0.76
CDC42BPB-203ENST00000558867 A0A087WZ39 114 aa10.3□□□□□ -0.76
CDC42BPB-203ENST00000558867 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
CDC42BPB-203ENST00000558867 MIAQ16674 131 aa10.3□□□□□ -0.76
CDC42BPB-203ENST00000558867 SCGB1D4Q6XE38 83 aa10.3□□□□□ -0.76
CDC42BPB-203ENST00000558867 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
CDC42BPB-203ENST00000558867 NDUFA1O15239 70 aa10.29□□□□□ -0.76
CDC42BPB-203ENST00000558867 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-203ENST00000558867 BATFQ16520 125 aa10.29□□□□□ -0.76
CDC42BPB-203ENST00000558867 CEND1Q8N111 149 aa10.29□□□□□ -0.76
CDC42BPB-203ENST00000558867 NDUFA12Q9UI09 145 aa10.29□□□□□ -0.76
CDC42BPB-203ENST00000558867 A6NDN8 102 aa10.28□□□□□ -0.76
CDC42BPB-203ENST00000558867 TIMM17BO60830 172 aa10.28□□□□□ -0.76
CDC42BPB-203ENST00000558867 REG3AQ06141 175 aa10.28□□□□□ -0.76
CDC42BPB-203ENST00000558867 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
CDC42BPB-203ENST00000558867 DPH3Q96FX2 82 aa10.28□□□□□ -0.76
CDC42BPB-203ENST00000558867 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
CDC42BPB-203ENST00000558867 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
CDC42BPB-203ENST00000558867 LINC00269Q8N2A0 174 aa10.27□□□□□ -0.77
CDC42BPB-203ENST00000558867 HIST1H4GQ99525 98 aa10.27□□□□□ -0.77
CDC42BPB-203ENST00000558867 A0A0J9YXY3 114 aa10.26□□□□□ -0.77
CDC42BPB-203ENST00000558867 TMEM238C9JI98 176 aa10.26□□□□□ -0.77
CDC42BPB-203ENST00000558867 MT1HL1P0DM35 61 aa10.26□□□□□ -0.77
CDC42BPB-203ENST00000558867 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
CDC42BPB-203ENST00000558867 Q6ZVH6 145 aa10.26□□□□□ -0.77
CDC42BPB-203ENST00000558867 TRAV8-4A0A0B4J246 113 aa10.25□□□□□ -0.77
CDC42BPB-203ENST00000558867 HERV-K104P63124 156 aa10.25□□□□□ -0.77
CDC42BPB-203ENST00000558867 ZNF625Q96I27 306 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPB-203ENST00000558867 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
CDC42BPB-203ENST00000558867 SPANXCQ9NY87 97 aa10.24□□□□□ -0.77
CDC42BPB-203ENST00000558867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPB-203ENST00000558867 RNF213Q63HN8 5207 aa10.24□□□□□ -0.77
CDC42BPB-203ENST00000558867 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 IGKV3OR2-268A0A0C4DH90 116 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 A0A1B0GWB2 263 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 FXYD2P54710 66 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 SDIM1Q6ZPB5 146 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 LITAFQ99732 161 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
CDC42BPB-203ENST00000558867 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms