RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 LINC00643Q86TS7 51 aa10.93□□□□□ -0.66
AP4E1-202ENST00000558439 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
AP4E1-202ENST00000558439 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
AP4E1-202ENST00000558439 IGHV4-28A0A0C4DH34 117 aa10.93□□□□□ -0.66
AP4E1-202ENST00000558439 HIGD2BQ4VC39 106 aa10.93□□□□□ -0.66
AP4E1-202ENST00000558439 XAGE1AQ9HD64 81 aa10.93□□□□□ -0.66
AP4E1-202ENST00000558439 IGLV5-39A0A0G2JS06 123 aa10.92□□□□□ -0.66
AP4E1-202ENST00000558439 SMIM20Q8N5G0 67 aa10.92□□□□□ -0.66
AP4E1-202ENST00000558439 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
AP4E1-202ENST00000558439 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
AP4E1-202ENST00000558439 F8P00451 2351 aa10.91□□□□□ -0.66
AP4E1-202ENST00000558439 FHL3Q13643 280 aa10.9□□□□□ -0.66
AP4E1-202ENST00000558439 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
AP4E1-202ENST00000558439 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
AP4E1-202ENST00000558439 C6orf99Q4VX62 202 aa10.9□□□□□ -0.66
AP4E1-202ENST00000558439 LYRM9A8MSI8 78 aa10.9□□□□□ -0.67
AP4E1-202ENST00000558439 A0A087WZ39 114 aa10.89□□□□□ -0.67
AP4E1-202ENST00000558439 DSCR8Q96T75 97 aa10.89□□□□□ -0.67
AP4E1-202ENST00000558439 DPH3Q96FX2 82 aa10.89□□□□□ -0.67
AP4E1-202ENST00000558439 A0A087WYN8 130 aa10.89□□□□□ -0.67
AP4E1-202ENST00000558439 A0A1B0GX51 115 aa10.89□□□□□ -0.67
AP4E1-202ENST00000558439 CELSR1Q9NYQ6 3014 aa10.88□□□□□ -0.67
AP4E1-202ENST00000558439 MRAPQ8TCY5 172 aa10.88□□□□□ -0.67
AP4E1-202ENST00000558439 CXCL5P42830 114 aa10.88□□□□□ -0.67
AP4E1-202ENST00000558439 GHRHP01286 108 aa10.87□□□□□ -0.67
AP4E1-202ENST00000558439 IGLV5-45A0A087WSX0 123 aa10.87□□□□□ -0.67
AP4E1-202ENST00000558439 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
AP4E1-202ENST00000558439 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
AP4E1-202ENST00000558439 SBSPONQ8IVN8 264 aa10.87□□□□□ -0.67
AP4E1-202ENST00000558439 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
AP4E1-202ENST00000558439 NF1P21359 2839 aa10.86□□□□□ -0.67
AP4E1-202ENST00000558439 IGHV3OR16-9A0A0B4J2B5 98 aa10.85□□□□□ -0.67
AP4E1-202ENST00000558439 NKAPP1Q8N9T2 125 aa10.85□□□□□ -0.67
AP4E1-202ENST00000558439 RPL28P46779 137 aaKnown RBP10.85□□□□□ -0.67
AP4E1-202ENST00000558439 UNQ6190/PRO20217Q6UXQ8 127 aa10.84□□□□□ -0.67
AP4E1-202ENST00000558439 FBN2P35556 2912 aa10.84□□□□□ -0.67
AP4E1-202ENST00000558439 FAM218AQ96MZ4 157 aa10.84□□□□□ -0.67
AP4E1-202ENST00000558439 A8MTW9 85 aa10.84□□□□□ -0.67
AP4E1-202ENST00000558439 TMEM256-PLSCR3K7ERE1 68 aa10.84□□□□□ -0.67
AP4E1-202ENST00000558439 KIR2DL5BQ8NHK3 375 aa10.83□□□□□ -0.68
AP4E1-202ENST00000558439 C16orf95Q9H693 158 aa10.83□□□□□ -0.68
AP4E1-202ENST00000558439 JMJD7-PLA2G4BH0Y9G9 81 aa10.83□□□□□ -0.68
AP4E1-202ENST00000558439 Q8IZM0 81 aa10.82□□□□□ -0.68
AP4E1-202ENST00000558439 SETXQ7Z333 2677 aaKnown RBP10.82□□□□□ -0.68
AP4E1-202ENST00000558439 RBM3P98179 157 aaKnown RBP10.82□□□□□ -0.68
AP4E1-202ENST00000558439 Q8N3U1 123 aa10.82□□□□□ -0.68
AP4E1-202ENST00000558439 OXLD1Q5BKU9 147 aa10.81□□□□□ -0.68
AP4E1-202ENST00000558439 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
AP4E1-202ENST00000558439 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
AP4E1-202ENST00000558439 UBR5O95071 2799 aaPredicted RBP10.8□□□□□ -0.68
AP4E1-202ENST00000558439 MIFP14174 115 aa10.8□□□□□ -0.68
AP4E1-202ENST00000558439 CELSR2Q9HCU4 2923 aa10.8□□□□□ -0.68
AP4E1-202ENST00000558439 CYSRT1A8MQ03 144 aa10.8□□□□□ -0.68
AP4E1-202ENST00000558439 TRAV23DV6A0A075B6W5 121 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 FAM240AA0A1B0GVK7 77 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 ATOX1O00244 68 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 GIG44P09565 113 aaPredicted RBP10.79□□□□□ -0.68
AP4E1-202ENST00000558439 IGHV4-30-4P0DP06 118 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 M0QXV9 152 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 SHISA2Q6UWI4 295 aa10.79□□□□□ -0.68
AP4E1-202ENST00000558439 SPENQ96T58 3664 aaKnown RBP10.78□□□□□ -0.68
AP4E1-202ENST00000558439 RETNQ9HD89 108 aa10.78□□□□□ -0.68
AP4E1-202ENST00000558439 WFDC9Q8NEX5 89 aa10.77□□□□□ -0.69
AP4E1-202ENST00000558439 Q6ZQY7 126 aa10.77□□□□□ -0.69
AP4E1-202ENST00000558439 ITPR2Q14571 2701 aa10.77□□□□□ -0.69
AP4E1-202ENST00000558439 A0A087WVE0 104 aa10.76□□□□□ -0.69
AP4E1-202ENST00000558439 TEP1Q99973 2627 aaKnown RBP10.76□□□□□ -0.69
AP4E1-202ENST00000558439 LELP1Q5T871 98 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 PSCAO43653 123 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 CELA1Q9UNI1 258 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 UNC79Q9P2D8 2635 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 KPRPQ5T749 579 aaPredicted RBP10.75□□□□□ -0.69
AP4E1-202ENST00000558439 Q6Q795 121 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 ENHOQ6UWT2 76 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 CITED1Q99966 193 aa10.75□□□□□ -0.69
AP4E1-202ENST00000558439 A0A1B0GUV1 79 aa10.74□□□□□ -0.69
AP4E1-202ENST00000558439 MAST4O15021 2626 aa10.74□□□□□ -0.69
AP4E1-202ENST00000558439 IGKV2-28A0A075B6P5 120 aa10.74□□□□□ -0.69
AP4E1-202ENST00000558439 IGKV2D-28P01615 120 aa10.74□□□□□ -0.69
AP4E1-202ENST00000558439 SCXQ7RTU7 201 aa10.74□□□□□ -0.69
AP4E1-202ENST00000558439 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
AP4E1-202ENST00000558439 COX7BP24311 80 aa10.73□□□□□ -0.69
AP4E1-202ENST00000558439 KRTAP1-3Q8IUG1 177 aa10.73□□□□□ -0.69
AP4E1-202ENST00000558439 X6R8D5 127 aa10.73□□□□□ -0.69
AP4E1-202ENST00000558439 MXRA5Q9NR99 2828 aa10.73□□□□□ -0.69
AP4E1-202ENST00000558439 UBE2DNLQ8IWF7 75 aa10.73□□□□□ -0.69
AP4E1-202ENST00000558439 CR1P17927 2039 aa10.72□□□□□ -0.69
AP4E1-202ENST00000558439 PLAC8L1A1L4L8 177 aa10.72□□□□□ -0.69
AP4E1-202ENST00000558439 CSNK1G2-AS1Q8NCQ2 148 aa10.72□□□□□ -0.69
AP4E1-202ENST00000558439 IMUPQ9GZP8 106 aa10.72□□□□□ -0.69
AP4E1-202ENST00000558439 DEFB131BA0A096LNP1 70 aa10.71□□□□□ -0.69
AP4E1-202ENST00000558439 PRB2P02812 416 aaPredicted RBP10.71□□□□□ -0.69
AP4E1-202ENST00000558439 Q8N814 137 aa10.71□□□□□ -0.69
AP4E1-202ENST00000558439 UQCRQO14949 82 aa10.71□□□□□ -0.7
AP4E1-202ENST00000558439 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.7
AP4E1-202ENST00000558439 LINC00846Q9NV44 126 aa10.71□□□□□ -0.7
AP4E1-202ENST00000558439 C19orf73Q9NVV2 129 aa10.71□□□□□ -0.7
AP4E1-202ENST00000558439 C3orf22Q8N5N4 141 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms