RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CCL26Q9Y258 94 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 C3P01024 1663 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 CPS1P31327 1500 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 NHSL1Q5SYE7 1610 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 ALPK2Q86TB3 2170 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 MED13LQ71F56 2210 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 IGKV3D-7A0A0C4DH55 119 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 IGKV3OR2-268A0A0C4DH90 116 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 TRBV6-5A0A0K0K1A5 114 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 LINC01549A6NIU2 74 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 F8VRH5 84 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 JMJD7-PLA2G4BH0Y9G9 81 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 DNAL4O96015 105 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 CCL3L1P16619 93 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 NCBP2-AS2Q69YL0 99 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 DEFB107AQ8IZN7 70 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 TOMM5Q8N4H5 51 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 COX7B2Q8TF08 81 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 C4orf3Q8WVX3 66 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 TTTY12Q9BZ98 90 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 WFDC10AQ9H1F0 79 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 R4GMQ9 66 aa1.3□□□□□ -2.2
SPG11-206ENST00000558093 DDX60LQ5H9U9 1706 aaKnown RBP1.29□□□□□ -2.2
SPG11-206ENST00000558093 TRBV7-4A0A0J9YYF1 115 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 TRBV6-4A0A1B0GX49 114 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 CCL18P55774 89 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 TPRXLQ17RH7 258 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 ZNF563Q8TA94 476 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 SPACA4Q8TDM5 124 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 SORL1Q92673 2214 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 EIF2AK4Q9P2K8 1649 aaKnown RBP1.29□□□□□ -2.2
SPG11-206ENST00000558093 NRXN3Q9Y4C0 1643 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 LY75O60449 1722 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 DOT1LQ8TEK3 1739 aa1.29□□□□□ -2.2
SPG11-206ENST00000558093 RTTNQ86VV8 2226 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 CTXND1A0A1B0GTU2 59 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 M0R135 149 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 PRH1P02810 166 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 IFI6P09912 130 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 IL9P15248 144 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 PDE6GP18545 87 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 Q86TA4 180 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 AMELXQ99217 191 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 KLK9Q9UKQ9 250 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 ANKRD50Q9ULJ7 1429 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 EFCAB6Q5THR3 1501 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 SAMD9Q5K651 1589 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 FAM208AQ9UK61 1670 aaKnown RBP1.28□□□□□ -2.2
SPG11-206ENST00000558093 CACNA1CQ13936 2221 aa1.28□□□□□ -2.2
SPG11-206ENST00000558093 FN1P02751 2386 aaKnown RBP1.27□□□□□ -2.21
SPG11-206ENST00000558093 TRPM2O94759 1503 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 AGLP35573 1532 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 NBDYA0A0U1RRE5 68 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 A0A1B0GUT8 65 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 HMGA1P17096 107 aaKnown RBP1.27□□□□□ -2.21
SPG11-206ENST00000558093 FCER1GP30273 86 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 RPL37AP61513 92 aaKnown RBP1.27□□□□□ -2.21
SPG11-206ENST00000558093 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 ZFHX3Q15911 3703 aa1.27□□□□□ -2.21
SPG11-206ENST00000558093 NWD1Q149M9 1564 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 A0A087WTM6 91 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 TRGV4A0A0C4DH28 118 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 IGKV2-29A2NJV5 120 aaPredicted RBP1.26□□□□□ -2.21
SPG11-206ENST00000558093 K7EMI3 77 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 UQCR11O14957 56 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 RNASE3P12724 160 aaKnown RBP1.26□□□□□ -2.21
SPG11-206ENST00000558093 SPINK7P58062 85 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 FXYD3Q14802 87 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 NREPQ16612 68 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 PLAC8Q9NZF1 115 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 V9GYV3 84 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 COL4A2P08572 1712 aa1.26□□□□□ -2.21
SPG11-206ENST00000558093 ERCC6L2Q5T890 1561 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.25□□□□□ -2.21
SPG11-206ENST00000558093 IGKV2-40A0A087WW87 121 aaPredicted RBP1.25□□□□□ -2.21
SPG11-206ENST00000558093 TRAV21A0A0B4J279 112 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 H0Y9P7 68 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 IGKV2D-40P01614 121 aaPredicted RBP1.25□□□□□ -2.21
SPG11-206ENST00000558093 MGPP08493 103 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 ZNF137PP52743 207 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 C10orf55Q5SWW7 151 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 C5orf56Q8N8D9 126 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 WFDC6Q9BQY6 131 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 NMES1Q9C002 83 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 ABCA1O95477 2261 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 QSER1Q2KHR3 1735 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 DDX60Q8IY21 1712 aaKnown RBP1.25□□□□□ -2.21
SPG11-206ENST00000558093 SLIT1O75093 1534 aa1.25□□□□□ -2.21
SPG11-206ENST00000558093 CADP27708 2225 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 TOGARAM1Q9Y4F4 1720 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 IQGAP1P46940 1657 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 TRGV1A0A0A0MS02 117 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 TRAV1-2A0A0B4J238 106 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 TRBV30A0A0K0K1B3 111 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 FXYD4P59646 89 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 C10orf113Q5VZT2 155 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 WFDC9Q8NEX5 89 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 TMEM263Q8WUH6 116 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms