RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 CRPP02741 224 aa8.95□□□□□ -0.98
LDLR-207ENST00000558013 CMC4P56277 68 aaPredicted RBP8.95□□□□□ -0.98
LDLR-207ENST00000558013 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
LDLR-207ENST00000558013 FAM110AQ9BQ89 295 aa8.95□□□□□ -0.98
LDLR-207ENST00000558013 A0A087WZ39 114 aa8.94□□□□□ -0.98
LDLR-207ENST00000558013 PF4P02776 101 aa8.94□□□□□ -0.98
LDLR-207ENST00000558013 PRR3P79522 188 aaKnown RBP8.94□□□□□ -0.98
LDLR-207ENST00000558013 X6R8D5 127 aa8.94□□□□□ -0.98
LDLR-207ENST00000558013 CCDC179H3BU77 68 aa8.93□□□□□ -0.98
LDLR-207ENST00000558013 COPS9Q8WXC6 57 aa8.93□□□□□ -0.98
LDLR-207ENST00000558013 IGLV10-54A0A075B6I4 117 aa8.93□□□□□ -0.98
LDLR-207ENST00000558013 B5MCH6 92 aa8.93□□□□□ -0.98
LDLR-207ENST00000558013 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
LDLR-207ENST00000558013 PAX4O43316 350 aa8.92□□□□□ -0.98
LDLR-207ENST00000558013 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
LDLR-207ENST00000558013 RPL28P46779 137 aaKnown RBP8.92□□□□□ -0.98
LDLR-207ENST00000558013 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
LDLR-207ENST00000558013 OR13C6PQ8NH95 151 aa8.92□□□□□ -0.98
LDLR-207ENST00000558013 TRACP01848 142 aa8.91□□□□□ -0.98
LDLR-207ENST00000558013 SLPIP03973 132 aa8.91□□□□□ -0.98
LDLR-207ENST00000558013 DEFB135Q30KP9 77 aa8.91□□□□□ -0.98
LDLR-207ENST00000558013 SS18L2Q9UHA2 77 aa8.9□□□□□ -0.98
LDLR-207ENST00000558013 KMT2BQ9UMN6 2715 aaPredicted RBP8.9□□□□□ -0.98
LDLR-207ENST00000558013 FAM240AA0A1B0GVK7 77 aa8.9□□□□□ -0.98
LDLR-207ENST00000558013 C9orf116Q5BN46 136 aaPredicted RBP8.89□□□□□ -0.99
LDLR-207ENST00000558013 LINC00269Q8N2A0 174 aa8.89□□□□□ -0.99
LDLR-207ENST00000558013 IBA57-AS1B1ANH7 110 aa8.89□□□□□ -0.99
LDLR-207ENST00000558013 KIR2DL5BQ8NHK3 375 aa8.89□□□□□ -0.99
LDLR-207ENST00000558013 MALP21145 153 aa8.88□□□□□ -0.99
LDLR-207ENST00000558013 GAGE2AQ6NT46 116 aa8.88□□□□□ -0.99
LDLR-207ENST00000558013 LECT2O14960 151 aa8.88□□□□□ -0.99
LDLR-207ENST00000558013 LINC00612Q8N6U2 182 aa8.88□□□□□ -0.99
LDLR-207ENST00000558013 PRO0255Q9UI72 69 aa8.87□□□□□ -0.99
LDLR-207ENST00000558013 Q6Q795 121 aa8.87□□□□□ -0.99
LDLR-207ENST00000558013 C3orf56Q8N813 242 aa8.87□□□□□ -0.99
LDLR-207ENST00000558013 LINC00526Q96FQ7 95 aa8.87□□□□□ -0.99
LDLR-207ENST00000558013 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
LDLR-207ENST00000558013 LY6G6DO95868 133 aa8.86□□□□□ -0.99
LDLR-207ENST00000558013 SS18Q15532 418 aa8.86□□□□□ -0.99
LDLR-207ENST00000558013 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
LDLR-207ENST00000558013 DNAL4O96015 105 aa8.85□□□□□ -0.99
LDLR-207ENST00000558013 HTN3P15516 51 aa8.85□□□□□ -0.99
LDLR-207ENST00000558013 Q8NDZ9 215 aa8.85□□□□□ -0.99
LDLR-207ENST00000558013 A0A1B0GUV1 79 aa8.84□□□□□ -0.99
LDLR-207ENST00000558013 NCR3O14931 201 aa8.84□□□□□ -0.99
LDLR-207ENST00000558013 ANGP03950 147 aaKnown RBP8.84□□□□□ -0.99
LDLR-207ENST00000558013 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
LDLR-207ENST00000558013 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
LDLR-207ENST00000558013 IGHV4-28A0A0C4DH34 117 aa8.83□□□□□ -1
LDLR-207ENST00000558013 INAFM1C9JVW0 142 aa8.83□□□□□ -1
LDLR-207ENST00000558013 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
LDLR-207ENST00000558013 J3QKU1 62 aa8.83□□□□□ -1
LDLR-207ENST00000558013 KIAA0087Q14695 138 aa8.83□□□□□ -1
LDLR-207ENST00000558013 CHCHD10Q8WYQ3 142 aaPredicted RBP8.83□□□□□ -1
LDLR-207ENST00000558013 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
LDLR-207ENST00000558013 NANOS2P60321 138 aaKnown RBP8.83□□□□□ -1
LDLR-207ENST00000558013 MRPL23Q16540 153 aaKnown RBP8.83□□□□□ -1
LDLR-207ENST00000558013 CFAP161Q6P656 301 aa8.83□□□□□ -1
LDLR-207ENST00000558013 C6orf223Q8N319 242 aa8.82□□□□□ -1
LDLR-207ENST00000558013 Q8IZM0 81 aa8.82□□□□□ -1
LDLR-207ENST00000558013 TENM3Q9P273 2699 aa8.81□□□□□ -1
LDLR-207ENST00000558013 ACYP1P07311 99 aa8.81□□□□□ -1
LDLR-207ENST00000558013 REG3AQ06141 175 aa8.81□□□□□ -1
LDLR-207ENST00000558013 C10orf25Q5T742 122 aa8.81□□□□□ -1
LDLR-207ENST00000558013 ANK2Q01484 3957 aa8.8□□□□□ -1
LDLR-207ENST00000558013 H0YGX0 51 aa8.79□□□□□ -1
LDLR-207ENST00000558013 DAD1P61803 113 aa8.79□□□□□ -1
LDLR-207ENST00000558013 LINC00643Q86TS7 51 aa8.79□□□□□ -1
LDLR-207ENST00000558013 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
LDLR-207ENST00000558013 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
LDLR-207ENST00000558013 FBN1P35555 2871 aaKnown RBP8.79□□□□□ -1
LDLR-207ENST00000558013 INAFM2P0DMQ5 153 aa8.78□□□□□ -1
LDLR-207ENST00000558013 STAB1Q9NY15 2570 aa8.78□□□□□ -1
LDLR-207ENST00000558013 SMIM9A6NGZ8 99 aa8.78□□□□□ -1
LDLR-207ENST00000558013 LINC00846Q9NV44 126 aa8.78□□□□□ -1
LDLR-207ENST00000558013 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
LDLR-207ENST00000558013 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
LDLR-207ENST00000558013 LYRM9A8MSI8 78 aa8.77□□□□□ -1.01
LDLR-207ENST00000558013 Q8NAQ8 132 aa8.76□□□□□ -1.01
LDLR-207ENST00000558013 C9orf66Q5T8R8 295 aa8.76□□□□□ -1.01
LDLR-207ENST00000558013 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
LDLR-207ENST00000558013 KLK12Q9UKR0 248 aa8.76□□□□□ -1.01
LDLR-207ENST00000558013 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
LDLR-207ENST00000558013 OBSCN-AS1Q96MR7 158 aa8.75□□□□□ -1.01
LDLR-207ENST00000558013 MAST4O15021 2626 aa8.75□□□□□ -1.01
LDLR-207ENST00000558013 CXCL5P42830 114 aa8.74□□□□□ -1.01
LDLR-207ENST00000558013 C6orf99Q4VX62 202 aa8.74□□□□□ -1.01
LDLR-207ENST00000558013 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
LDLR-207ENST00000558013 A0A087WVE0 104 aa8.74□□□□□ -1.01
LDLR-207ENST00000558013 ORMDL1Q9P0S3 153 aa8.74□□□□□ -1.01
LDLR-207ENST00000558013 Q8N814 137 aa8.73□□□□□ -1.01
LDLR-207ENST00000558013 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
LDLR-207ENST00000558013 CYSRT1A8MQ03 144 aa8.72□□□□□ -1.01
LDLR-207ENST00000558013 IGHV4-30-4P0DP06 118 aa8.71□□□□□ -1.01
LDLR-207ENST00000558013 APOC4P55056 127 aa8.71□□□□□ -1.01
LDLR-207ENST00000558013 SPAG11BQ08648 103 aa8.71□□□□□ -1.01
LDLR-207ENST00000558013 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.01
LDLR-207ENST00000558013 ENHOQ6UWT2 76 aa8.71□□□□□ -1.02
LDLR-207ENST00000558013 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
LDLR-207ENST00000558013 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms