RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-233ENST00000557529 C9orf118A6NHY6 69 aa8.39□□□□□ -1.07
SHMT2-233ENST00000557529 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
SHMT2-233ENST00000557529 K7ERJ3 54 aa8.39□□□□□ -1.07
SHMT2-233ENST00000557529 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
SHMT2-233ENST00000557529 A4D1N5 150 aa8.38□□□□□ -1.07
SHMT2-233ENST00000557529 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
SHMT2-233ENST00000557529 RAB37Q96AX2 223 aa8.38□□□□□ -1.07
SHMT2-233ENST00000557529 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
SHMT2-233ENST00000557529 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
SHMT2-233ENST00000557529 KRTAP26-1Q6PEX3 210 aa8.37□□□□□ -1.07
SHMT2-233ENST00000557529 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 CFC1P0CG37 223 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 LINC00158P58513 81 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 LINC00308Q8TCZ7 52 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 RMI2Q96E14 147 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
SHMT2-233ENST00000557529 A0A0U1RRA0 63 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 H3BUT2 72 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 DAND5Q8N907 189 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 COX17Q14061 63 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 VAMP3Q15836 100 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 PRO1854Q9UHT4 67 aa8.35□□□□□ -1.07
SHMT2-233ENST00000557529 MEGF8Q7Z7M0 2845 aa8.34□□□□□ -1.07
SHMT2-233ENST00000557529 NPC2P61916 151 aa8.34□□□□□ -1.07
SHMT2-233ENST00000557529 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
SHMT2-233ENST00000557529 Q9HAA7 133 aa8.34□□□□□ -1.07
SHMT2-233ENST00000557529 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
SHMT2-233ENST00000557529 F8WDY8 70 aa8.33□□□□□ -1.08
SHMT2-233ENST00000557529 PFN2P35080 140 aa8.33□□□□□ -1.08
SHMT2-233ENST00000557529 MUC7Q8TAX7 377 aa8.33□□□□□ -1.08
SHMT2-233ENST00000557529 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-233ENST00000557529 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
SHMT2-233ENST00000557529 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
SHMT2-233ENST00000557529 FABP2P12104 132 aa8.32□□□□□ -1.08
SHMT2-233ENST00000557529 NAA38Q9BRA0 125 aaKnown RBP8.32□□□□□ -1.08
SHMT2-233ENST00000557529 GVQW2A0A096LPI5 108 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-233ENST00000557529 SOSTDC1Q6X4U4 206 aa8.31□□□□□ -1.08
SHMT2-233ENST00000557529 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
SHMT2-233ENST00000557529 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
SHMT2-233ENST00000557529 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-233ENST00000557529 TSPAN13O95857 204 aa8.3□□□□□ -1.08
SHMT2-233ENST00000557529 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
SHMT2-233ENST00000557529 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
SHMT2-233ENST00000557529 TRBV30A0A0K0K1B3 111 aa8.29□□□□□ -1.08
SHMT2-233ENST00000557529 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
SHMT2-233ENST00000557529 HIGD2BQ4VC39 106 aa8.29□□□□□ -1.08
SHMT2-233ENST00000557529 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
SHMT2-233ENST00000557529 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
SHMT2-233ENST00000557529 GAGE10A6NGK3 116 aa8.28□□□□□ -1.08
SHMT2-233ENST00000557529 C10orf25Q5T742 122 aa8.28□□□□□ -1.08
SHMT2-233ENST00000557529 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
SHMT2-233ENST00000557529 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
SHMT2-233ENST00000557529 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
SHMT2-233ENST00000557529 SPCS1Q9Y6A9 102 aa8.28□□□□□ -1.08
SHMT2-233ENST00000557529 LOC107984156A0A0G2JMH3 177 aa8.27□□□□□ -1.09
SHMT2-233ENST00000557529 K7EP34 96 aa8.27□□□□□ -1.09
SHMT2-233ENST00000557529 TTC32Q5I0X7 151 aa8.27□□□□□ -1.09
SHMT2-233ENST00000557529 ARL17AQ8IVW1 177 aa8.27□□□□□ -1.09
SHMT2-233ENST00000557529 Q1RN00 199 aa8.26□□□□□ -1.09
SHMT2-233ENST00000557529 C9orf116Q5BN46 136 aaPredicted RBP8.26□□□□□ -1.09
SHMT2-233ENST00000557529 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
SHMT2-233ENST00000557529 DYNC2H1Q8NCM8 4307 aaKnown RBP8.26□□□□□ -1.09
SHMT2-233ENST00000557529 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
SHMT2-233ENST00000557529 H7C2G1 150 aa8.25□□□□□ -1.09
SHMT2-233ENST00000557529 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
SHMT2-233ENST00000557529 PRKDCP78527 4128 aaKnown RBP8.25□□□□□ -1.09
SHMT2-233ENST00000557529 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
SHMT2-233ENST00000557529 PSMB2P49721 201 aa8.24□□□□□ -1.09
SHMT2-233ENST00000557529 SYCNQ0VAF6 134 aa8.24□□□□□ -1.09
SHMT2-233ENST00000557529 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
SHMT2-233ENST00000557529 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
SHMT2-233ENST00000557529 NDUFC2O95298 119 aa8.23□□□□□ -1.09
SHMT2-233ENST00000557529 Q6ZRU5 148 aa8.23□□□□□ -1.09
SHMT2-233ENST00000557529 SCGB1C2P0DMR2 95 aa8.22□□□□□ -1.09
SHMT2-233ENST00000557529 RNF151Q2KHN1 245 aa8.22□□□□□ -1.09
SHMT2-233ENST00000557529 TRBV20-1A0A075B6N2 111 aa8.22□□□□□ -1.09
SHMT2-233ENST00000557529 COX6CP09669 75 aa8.22□□□□□ -1.09
SHMT2-233ENST00000557529 CASC10Q5T4H9 136 aa8.22□□□□□ -1.09
SHMT2-233ENST00000557529 FBN3Q75N90 2809 aa8.21□□□□□ -1.09
SHMT2-233ENST00000557529 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
SHMT2-233ENST00000557529 PSCAO43653 123 aa8.21□□□□□ -1.1
SHMT2-233ENST00000557529 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
SHMT2-233ENST00000557529 CARD19Q96LW7 228 aa8.21□□□□□ -1.1
SHMT2-233ENST00000557529 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.1
SHMT2-233ENST00000557529 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
SHMT2-233ENST00000557529 TRIAP1O43715 76 aa8.2□□□□□ -1.1
SHMT2-233ENST00000557529 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
SHMT2-233ENST00000557529 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
SHMT2-233ENST00000557529 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
SHMT2-233ENST00000557529 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
SHMT2-233ENST00000557529 DNAH7Q8WXX0 4024 aa8.16□□□□□ -1.1
SHMT2-233ENST00000557529 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
SHMT2-233ENST00000557529 H3BMG7 143 aa8.16□□□□□ -1.1
SHMT2-233ENST00000557529 LECT2O14960 151 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms