RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SH3BGRL3Q9H299 93 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 OTORQ9NRC9 128 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 PGPA6NDG6 321 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 SERF1AO75920 110 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 BCL2P10415 239 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 RNASE3P12724 160 aaKnown RBP3.74□□□□□ -1.81
VPS33B-207ENST00000557470 ZNF80P51504 273 aaPredicted RBP3.74□□□□□ -1.81
VPS33B-207ENST00000557470 GNG5P63218 68 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 C14orf177Q52M58 125 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 MEIG1Q5JSS6 88 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 C14orf178Q8N769 122 aaPredicted RBP3.74□□□□□ -1.81
VPS33B-207ENST00000557470 TMEM191AQ9H0A3 160 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 KCNIP2Q9NS61 270 aa3.74□□□□□ -1.81
VPS33B-207ENST00000557470 SMIM1B2RUZ4 78 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 H3BMG7 143 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 H3BUT2 72 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 SNCGO76070 127 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 CXorf1O96002 111 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 C3orf79P0CE67 100 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 ZFP2Q6ZN57 461 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 RAB37Q96AX2 223 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 TMEM101Q96IK0 257 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 SMIM7Q9BQ49 75 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 JPT2Q9H910 190 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 TNXBP22105 4242 aa3.73□□□□□ -1.81
VPS33B-207ENST00000557470 A8MWV9 139 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 APOMO95445 188 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 HLA-DQA1P01909 254 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 TAS2R45P59539 299 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 UBE2G1P62253 170 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 C1orf195Q5TG92 126 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 LYRM7Q5U5X0 104 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 RASL11AQ6T310 242 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 Q6ZRP5 223 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 NRACQ8N912 160 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 PPDPFLQ8WWR9 84 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 ZC2HC1AQ96GY0 325 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 KIR2DL4Q99706 377 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 CHCHD7Q9BUK0 85 aa3.72□□□□□ -1.81
VPS33B-207ENST00000557470 SYS1-DBNDD2H3BUS1 97 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 COX8AP10176 69 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
VPS33B-207ENST00000557470 SDIM1Q6ZPB5 146 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 TMEM136Q6ZRR5 245 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 GNB1LQ9BYB4 327 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
VPS33B-207ENST00000557470 IGKV3D-20A0A0C4DH25 116 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 A0A1B0GV50 99 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 NUPR1O60356 82 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 GAS8-AS1O95177 125 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 NCR2O95944 276 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 CRPP02741 224 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 MT-ATP8P03928 68 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 TCRAP04437 139 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 S100A4P26447 101 aaKnown RBP3.7□□□□□ -1.82
VPS33B-207ENST00000557470 RPL23P62829 140 aaKnown RBP3.7□□□□□ -1.82
VPS33B-207ENST00000557470 CACNG7P62955 275 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 FAM74A4Q5TZK3 123 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 PRNTQ86SH4 94 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 LINC01600Q96MT4 127 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 GNG13Q9P2W3 67 aa3.7□□□□□ -1.82
VPS33B-207ENST00000557470 A0A087WYN8 130 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 IGHV3OR16-9A0A0B4J2B5 98 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 A0A0U1RQV1 116 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 H3BVH4 76 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 ANGP03950 147 aaKnown RBP3.69□□□□□ -1.82
VPS33B-207ENST00000557470 CHTF8P0CG12 524 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 ARL14EPLP0DKL9 152 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 UBE2D3P61077 147 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 UBE2D2P62837 147 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 SERF2P84101 59 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 MIAQ16674 131 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 KRTAP26-1Q6PEX3 210 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 IL36BQ9NZH7 164 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 ARL2-SNX15V9GYD0 113 aa3.69□□□□□ -1.82
VPS33B-207ENST00000557470 TRBV7-3A0A075B6L6 115 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 TRBV6-8A0A0A6YYG3 113 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 TRBV10-1A0A0K0K1A3 114 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 H0Y9J4 135 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 UQCRQO14949 82 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 DPM2O94777 84 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 NDUFC2O95298 119 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 CNBPP62633 177 aaKnown RBP3.68□□□□□ -1.82
VPS33B-207ENST00000557470 CCL20P78556 96 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 RPL36AP83881 106 aaKnown RBP3.68□□□□□ -1.82
VPS33B-207ENST00000557470 REG3GQ6UW15 175 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 CLPSL2Q6UWE3 100 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 SPACA4Q8TDM5 124 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 RPL36ALQ969Q0 106 aaKnown RBP3.68□□□□□ -1.82
VPS33B-207ENST00000557470 PLEKHB2Q96CS7 222 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 IMUPQ9GZP8 106 aa3.68□□□□□ -1.82
VPS33B-207ENST00000557470 IGLV4-3A0A075B6K6 122 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms