RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 A0A087WYN8 130 aa12.28□□□□□ -0.44
XRCC3-218ENST00000557439 ATP5G1P05496 136 aa12.28□□□□□ -0.44
XRCC3-218ENST00000557439 NDUFV3P56181 108 aaKnown RBP12.28□□□□□ -0.44
XRCC3-218ENST00000557439 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
XRCC3-218ENST00000557439 DEFB135Q30KP9 77 aa12.27□□□□□ -0.44
XRCC3-218ENST00000557439 C6orf226Q5I0X4 101 aa12.27□□□□□ -0.44
XRCC3-218ENST00000557439 IGLV10-54A0A075B6I4 117 aa12.27□□□□□ -0.45
XRCC3-218ENST00000557439 TRAV13-2A0A0B4J235 113 aa12.26□□□□□ -0.45
XRCC3-218ENST00000557439 PAX4O43316 350 aa12.26□□□□□ -0.45
XRCC3-218ENST00000557439 C9orf129Q5T035 196 aaKnown RBP12.26□□□□□ -0.45
XRCC3-218ENST00000557439 KIR2DL5BQ8NHK3 375 aa12.26□□□□□ -0.45
XRCC3-218ENST00000557439 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
XRCC3-218ENST00000557439 TRACP01848 142 aa12.25□□□□□ -0.45
XRCC3-218ENST00000557439 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
XRCC3-218ENST00000557439 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
XRCC3-218ENST00000557439 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
XRCC3-218ENST00000557439 ATRQ13535 2644 aa12.24□□□□□ -0.45
XRCC3-218ENST00000557439 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
XRCC3-218ENST00000557439 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
XRCC3-218ENST00000557439 J3QKU1 62 aa12.23□□□□□ -0.45
XRCC3-218ENST00000557439 LY6G6DO95868 133 aa12.23□□□□□ -0.45
XRCC3-218ENST00000557439 LINC00269Q8N2A0 174 aa12.23□□□□□ -0.45
XRCC3-218ENST00000557439 PRO0255Q9UI72 69 aa12.23□□□□□ -0.45
XRCC3-218ENST00000557439 CCDC179H3BU77 68 aa12.22□□□□□ -0.45
XRCC3-218ENST00000557439 SLPIP03973 132 aa12.22□□□□□ -0.45
XRCC3-218ENST00000557439 FAM240AA0A1B0GVK7 77 aa12.22□□□□□ -0.45
XRCC3-218ENST00000557439 SS18Q15532 418 aa12.21□□□□□ -0.45
XRCC3-218ENST00000557439 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.46
XRCC3-218ENST00000557439 B5MCH6 92 aa12.2□□□□□ -0.46
XRCC3-218ENST00000557439 MALP21145 153 aa12.2□□□□□ -0.46
XRCC3-218ENST00000557439 LECT2O14960 151 aa12.2□□□□□ -0.46
XRCC3-218ENST00000557439 CELA1Q9UNI1 258 aa12.2□□□□□ -0.46
XRCC3-218ENST00000557439 NSD1Q96L73 2696 aaPredicted RBP12.19□□□□□ -0.46
XRCC3-218ENST00000557439 INAFM1C9JVW0 142 aa12.19□□□□□ -0.46
XRCC3-218ENST00000557439 GAGE2AQ6NT46 116 aa12.19□□□□□ -0.46
XRCC3-218ENST00000557439 HTN3P15516 51 aa12.18□□□□□ -0.46
XRCC3-218ENST00000557439 Q6Q795 121 aa12.18□□□□□ -0.46
XRCC3-218ENST00000557439 ANGP03950 147 aaKnown RBP12.18□□□□□ -0.46
XRCC3-218ENST00000557439 SS18L2Q9UHA2 77 aa12.18□□□□□ -0.46
XRCC3-218ENST00000557439 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
XRCC3-218ENST00000557439 IGHV4-28A0A0C4DH34 117 aa12.17□□□□□ -0.46
XRCC3-218ENST00000557439 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
XRCC3-218ENST00000557439 DNAL4O96015 105 aa12.17□□□□□ -0.46
XRCC3-218ENST00000557439 LINC00526Q96FQ7 95 aa12.17□□□□□ -0.46
XRCC3-218ENST00000557439 PPDPFQ9H3Y8 114 aa12.16□□□□□ -0.46
XRCC3-218ENST00000557439 C14orf132Q9NPU4 83 aa12.16□□□□□ -0.46
XRCC3-218ENST00000557439 HIVEP1P15822 2718 aa12.16□□□□□ -0.46
XRCC3-218ENST00000557439 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
XRCC3-218ENST00000557439 Q8IZM0 81 aa12.15□□□□□ -0.47
XRCC3-218ENST00000557439 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
XRCC3-218ENST00000557439 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
XRCC3-218ENST00000557439 NCR3O14931 201 aa12.13□□□□□ -0.47
XRCC3-218ENST00000557439 DAD1P61803 113 aa12.13□□□□□ -0.47
XRCC3-218ENST00000557439 REG3AQ06141 175 aa12.13□□□□□ -0.47
XRCC3-218ENST00000557439 KIAA0087Q14695 138 aa12.13□□□□□ -0.47
XRCC3-218ENST00000557439 Q8NDZ9 215 aa12.13□□□□□ -0.47
XRCC3-218ENST00000557439 SMIM9A6NGZ8 99 aa12.12□□□□□ -0.47
XRCC3-218ENST00000557439 C6orf223Q8N319 242 aa12.12□□□□□ -0.47
XRCC3-218ENST00000557439 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
XRCC3-218ENST00000557439 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
XRCC3-218ENST00000557439 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
XRCC3-218ENST00000557439 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
XRCC3-218ENST00000557439 NANOS2P60321 138 aaKnown RBP12.11□□□□□ -0.47
XRCC3-218ENST00000557439 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
XRCC3-218ENST00000557439 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
XRCC3-218ENST00000557439 ACYP1P07311 99 aa12.1□□□□□ -0.47
XRCC3-218ENST00000557439 CD164L2Q6UWJ8 174 aa12.1□□□□□ -0.47
XRCC3-218ENST00000557439 H0YGX0 51 aa12.09□□□□□ -0.47
XRCC3-218ENST00000557439 C10orf25Q5T742 122 aa12.09□□□□□ -0.47
XRCC3-218ENST00000557439 PKD1L1Q8TDX9 2849 aa12.08□□□□□ -0.48
XRCC3-218ENST00000557439 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
XRCC3-218ENST00000557439 Q8NAQ8 132 aa12.08□□□□□ -0.48
XRCC3-218ENST00000557439 LINC00643Q86TS7 51 aa12.07□□□□□ -0.48
XRCC3-218ENST00000557439 UNQ6190/PRO20217Q6UXQ8 127 aa12.06□□□□□ -0.48
XRCC3-218ENST00000557439 KLK12Q9UKR0 248 aa12.05□□□□□ -0.48
XRCC3-218ENST00000557439 APOC4P55056 127 aa12.04□□□□□ -0.48
XRCC3-218ENST00000557439 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
XRCC3-218ENST00000557439 LINC00846Q9NV44 126 aa12.03□□□□□ -0.48
XRCC3-218ENST00000557439 IGKV3D-7A0A0C4DH55 119 aa12.02□□□□□ -0.48
XRCC3-218ENST00000557439 IGHV4-30-4P0DP06 118 aa12.01□□□□□ -0.49
XRCC3-218ENST00000557439 ORMDL1Q9P0S3 153 aa12.01□□□□□ -0.49
XRCC3-218ENST00000557439 KLK5Q9Y337 293 aaPredicted RBP12.01□□□□□ -0.49
XRCC3-218ENST00000557439 C6orf99Q4VX62 202 aa12.01□□□□□ -0.49
XRCC3-218ENST00000557439 SPAG11BQ08648 103 aa12□□□□□ -0.49
XRCC3-218ENST00000557439 OBSCN-AS1Q96MR7 158 aa12□□□□□ -0.49
XRCC3-218ENST00000557439 CXCL5P42830 114 aa11.99□□□□□ -0.49
XRCC3-218ENST00000557439 Q8N814 137 aa11.99□□□□□ -0.49
XRCC3-218ENST00000557439 RETNQ9HD89 108 aa11.99□□□□□ -0.49
XRCC3-218ENST00000557439 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
XRCC3-218ENST00000557439 SPART-AS1P0CW21 52 aa11.99□□□□□ -0.49
XRCC3-218ENST00000557439 LINC01561Q8N1V8 128 aa11.99□□□□□ -0.49
XRCC3-218ENST00000557439 MIFP14174 115 aa11.98□□□□□ -0.49
XRCC3-218ENST00000557439 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
XRCC3-218ENST00000557439 IMUPQ9GZP8 106 aa11.97□□□□□ -0.49
XRCC3-218ENST00000557439 TMEM126AQ9H061 195 aa11.97□□□□□ -0.49
XRCC3-218ENST00000557439 COX17Q14061 63 aa11.96□□□□□ -0.49
XRCC3-218ENST00000557439 S100A7L2Q5SY68 101 aa11.96□□□□□ -0.49
XRCC3-218ENST00000557439 LELP1Q5T871 98 aa11.96□□□□□ -0.49
XRCC3-218ENST00000557439 A0A087WVE0 104 aa11.96□□□□□ -0.5
XRCC3-218ENST00000557439 NDUFC2O95298 119 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms