RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 M0QXV9 152 aa6.66□□□□□ -1.34
HNRNPC-231ENST00000557336 TMEM136Q6ZRR5 245 aa6.66□□□□□ -1.34
HNRNPC-231ENST00000557336 ORMDL3Q8N138 153 aa6.66□□□□□ -1.34
HNRNPC-231ENST00000557336 PRELID3AQ96N28 172 aa6.66□□□□□ -1.34
HNRNPC-231ENST00000557336 TGIF2-C20orf24A0A0A6YYL0 155 aa6.65□□□□□ -1.34
HNRNPC-231ENST00000557336 TRBV30A0A0K0K1B3 111 aa6.65□□□□□ -1.34
HNRNPC-231ENST00000557336 S100A8P05109 93 aa6.65□□□□□ -1.34
HNRNPC-231ENST00000557336 IFI27P40305 119 aaPredicted RBP6.65□□□□□ -1.34
HNRNPC-231ENST00000557336 PEA15Q15121 130 aa6.65□□□□□ -1.34
HNRNPC-231ENST00000557336 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
HNRNPC-231ENST00000557336 TMEM141Q96I45 108 aa6.64□□□□□ -1.35
HNRNPC-231ENST00000557336 AMELXQ99217 191 aa6.64□□□□□ -1.35
HNRNPC-231ENST00000557336 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
HNRNPC-231ENST00000557336 LOC389332A0A1B0GUA5 103 aa6.63□□□□□ -1.35
HNRNPC-231ENST00000557336 IGIPA6NJ69 53 aa6.63□□□□□ -1.35
HNRNPC-231ENST00000557336 RAB5AP20339 215 aa6.63□□□□□ -1.35
HNRNPC-231ENST00000557336 ATP5L2Q7Z4Y8 100 aa6.63□□□□□ -1.35
HNRNPC-231ENST00000557336 UBE2BP63146 152 aa6.62□□□□□ -1.35
HNRNPC-231ENST00000557336 C2orf66Q6UXQ4 117 aa6.62□□□□□ -1.35
HNRNPC-231ENST00000557336 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
HNRNPC-231ENST00000557336 ZNF861PO60384 105 aa6.61□□□□□ -1.35
HNRNPC-231ENST00000557336 TEX43Q6ZNM6 134 aa6.61□□□□□ -1.35
HNRNPC-231ENST00000557336 LINC00469Q8N7U9 141 aa6.61□□□□□ -1.35
HNRNPC-231ENST00000557336 Q8N8P6 123 aa6.61□□□□□ -1.35
HNRNPC-231ENST00000557336 XAGE1AQ9HD64 81 aa6.61□□□□□ -1.35
HNRNPC-231ENST00000557336 C22orf24Q9Y442 160 aa6.61□□□□□ -1.35
HNRNPC-231ENST00000557336 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
HNRNPC-231ENST00000557336 PACRGQ96M98 296 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-231ENST00000557336 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
HNRNPC-231ENST00000557336 LAMTOR2Q9Y2Q5 125 aa6.6□□□□□ -1.35
HNRNPC-231ENST00000557336 CARHSP1Q9Y2V2 147 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-231ENST00000557336 A0A087X002 238 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 PRR4Q16378 134 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 Q6ZN92 141 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 Q8IZM0 81 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 VCX2Q9H322 139 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 MAP1LC3AQ9H492 121 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
HNRNPC-231ENST00000557336 NPSP0C0P6 89 aa6.58□□□□□ -1.36
HNRNPC-231ENST00000557336 RPL13AP40429 203 aaKnown RBP6.58□□□□□ -1.36
HNRNPC-231ENST00000557336 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
HNRNPC-231ENST00000557336 C2orf88Q9BSF0 95 aa6.58□□□□□ -1.36
HNRNPC-231ENST00000557336 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
HNRNPC-231ENST00000557336 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
HNRNPC-231ENST00000557336 CKS1BP61024 79 aa6.57□□□□□ -1.36
HNRNPC-231ENST00000557336 ALKBH7Q9BT30 221 aaPredicted RBP6.57□□□□□ -1.36
HNRNPC-231ENST00000557336 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
HNRNPC-231ENST00000557336 NUPR1O60356 82 aa6.56□□□□□ -1.36
HNRNPC-231ENST00000557336 PRSS2P07478 247 aa6.56□□□□□ -1.36
HNRNPC-231ENST00000557336 ORMDL2Q53FV1 153 aa6.56□□□□□ -1.36
HNRNPC-231ENST00000557336 TP73-AS1Q9UF72 201 aa6.56□□□□□ -1.36
HNRNPC-231ENST00000557336 F8VRH5 84 aa6.55□□□□□ -1.36
HNRNPC-231ENST00000557336 K7EMI3 77 aa6.55□□□□□ -1.36
HNRNPC-231ENST00000557336 TSPAN13O95857 204 aa6.55□□□□□ -1.36
HNRNPC-231ENST00000557336 MRPL55Q7Z7F7 128 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-231ENST00000557336 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
HNRNPC-231ENST00000557336 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 BCE1O60756 84 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 HERVK_113P63121 156 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 LBHQ53QV2 105 aaPredicted RBP6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 KRTAP13-1Q8IUC0 172 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 TOMM6Q96B49 74 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 LINC00167Q96N53 147 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
HNRNPC-231ENST00000557336 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
HNRNPC-231ENST00000557336 MT-ND4LP03901 98 aa6.53□□□□□ -1.36
HNRNPC-231ENST00000557336 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
HNRNPC-231ENST00000557336 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
HNRNPC-231ENST00000557336 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
HNRNPC-231ENST00000557336 KIAA1644Q3SXP7 199 aa6.52□□□□□ -1.37
HNRNPC-231ENST00000557336 IGLV5-37A0A075B6J1 123 aa6.51□□□□□ -1.37
HNRNPC-231ENST00000557336 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
HNRNPC-231ENST00000557336 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-231ENST00000557336 SEC11AP67812 179 aa6.51□□□□□ -1.37
HNRNPC-231ENST00000557336 ERASQ7Z444 233 aa6.51□□□□□ -1.37
HNRNPC-231ENST00000557336 GEMIN7Q9H840 131 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-231ENST00000557336 TINCRA0A1B0GVN0 87 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 LINC01546A6NGU7 62 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 SCO1O75880 301 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 CRYGAP11844 174 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 PAPPA-AS1Q5QFB9 102 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
HNRNPC-231ENST00000557336 CXCL5P42830 114 aa6.49□□□□□ -1.37
HNRNPC-231ENST00000557336 SCGB3A1Q96QR1 104 aa6.49□□□□□ -1.37
HNRNPC-231ENST00000557336 CST9LQ9H4G1 147 aa6.49□□□□□ -1.37
HNRNPC-231ENST00000557336 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
HNRNPC-231ENST00000557336 RAB5BP61020 215 aa6.48□□□□□ -1.37
HNRNPC-231ENST00000557336 G0S2P27469 103 aa6.47□□□□□ -1.37
HNRNPC-231ENST00000557336 Q8NDZ9 215 aa6.47□□□□□ -1.37
HNRNPC-231ENST00000557336 RETNLBQ9BQ08 111 aa6.47□□□□□ -1.37
HNRNPC-231ENST00000557336 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
HNRNPC-231ENST00000557336 IGLV5-39A0A0G2JS06 123 aa6.45□□□□□ -1.38
HNRNPC-231ENST00000557336 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
HNRNPC-231ENST00000557336 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
HNRNPC-231ENST00000557336 A0A096LNJ9 63 aa6.44□□□□□ -1.38
HNRNPC-231ENST00000557336 VPREB1P12018 145 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms