RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TMEM241Q24JQ0 296 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 DNLZQ5SXM8 178 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 SPAG11AQ6PDA7 123 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 C3orf22Q8N5N4 141 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 PACRGQ96M98 296 aaPredicted RBP1.91□□□□□ -2.1
CHD8-212ENST00000557329 C22orf24Q9Y442 160 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 CENPXA8MT69 81 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 TLX1NBP0CAT3 122 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 NTF3P20783 257 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 TRIQKQ629K1 86 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 Q86TA4 180 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 STOML3Q8TAV4 291 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 MRAP2Q96G30 205 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 SEC22CQ9BRL7 303 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 C11orf1Q9H5F2 150 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 WFDC1Q9HC57 220 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 TMEM167BQ9NRX6 74 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 ZFP30Q9Y2G7 519 aa1.9□□□□□ -2.11
CHD8-212ENST00000557329 A0A1B0GVX0 72 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 TMEM223A0PJW6 202 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 SIX6O95475 246 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 CXorf1O96002 111 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 ZNF25P17030 456 aaPredicted RBP1.89□□□□□ -2.11
CHD8-212ENST00000557329 PRLHP81277 87 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 FAM229BQ4G0N7 80 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 FAM19A1Q7Z5A9 133 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
CHD8-212ENST00000557329 SMDT1Q9H4I9 107 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 MRPL35Q9NZE8 188 aaKnown RBP1.89□□□□□ -2.11
CHD8-212ENST00000557329 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
CHD8-212ENST00000557329 INMT-MINDY4F8WBC2 141 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 G3V3Q6 166 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 I3L3M4 83 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 TRGC1P0CF51 173 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 FCER1GP30273 86 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 S100A5P33763 92 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 AKR1C3P42330 323 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 RPS20P60866 119 aaKnown RBP1.88□□□□□ -2.11
CHD8-212ENST00000557329 C2orf82Q6UX34 121 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 SMIM15Q7Z3B0 74 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 MRPL55Q7Z7F7 128 aaKnown RBP1.88□□□□□ -2.11
CHD8-212ENST00000557329 BAGE2Q86Y30 109 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 OR10D4PQ8NGN7 298 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 HIST1H2BAQ96A08 127 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 FMC1Q96HJ9 113 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 CCDC32Q9BV29 185 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 HIGD2AQ9BW72 106 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 ACTR3CQ9C0K3 210 aaPredicted RBP1.88□□□□□ -2.11
CHD8-212ENST00000557329 TOMM7Q9P0U1 55 aa1.88□□□□□ -2.11
CHD8-212ENST00000557329 A0A1W2PRE2 83 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 NAP1L6A6NFF2 107 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 SDHAF1A6NFY7 115 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 CCDC160A6NGH7 325 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 ZNF727A8MUV8 499 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 NDUFC2-KCTD14E9PQ53 114 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 NCR2O95944 276 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 STAG3L2P0CL84 134 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 STAG3L3P0CL85 134 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 CKS1BP61024 79 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 LYZL1Q6UWQ5 148 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 CBLN2Q8IUK8 224 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 GATD1Q8NB37 220 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 TIMM17AQ99595 171 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 TMEM242Q9NWH2 141 aa1.87□□□□□ -2.11
CHD8-212ENST00000557329 A0A1B0GV50 99 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 C7orf77A4D0Y5 90 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 SLC25A20O43772 301 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 SPINK1P00995 79 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 IFNA1P01562 189 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 MBP02144 154 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 LGALS3P17931 250 aaKnown RBP1.86□□□□□ -2.11
CHD8-212ENST00000557329 FOXA3P55318 350 aaPredicted RBP1.86□□□□□ -2.11
CHD8-212ENST00000557329 RAB5BP61020 215 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 SMAGPQ0VAQ4 97 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 C6orf226Q5I0X4 101 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 FAM19A2Q8N3H0 131 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 ST20Q9HBF5 79 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 HSPB11Q9Y547 144 aa1.86□□□□□ -2.11
CHD8-212ENST00000557329 NEBP20929 6669 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 TGIF2-C20orf24A0A0A6YYL0 155 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 TRBV30A0A0K0K1B3 111 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 XKRY2A2RUG3 117 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 UPK1BO75841 260 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 SCO1O75880 301 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 LTAP01374 205 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 ATP6V0CP27449 155 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 CTAG1AP78358 180 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 HRCT1Q6UXD1 115 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 TEX43Q6ZNM6 134 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 Q6ZUT4 128 aa1.85□□□□□ -2.11
CHD8-212ENST00000557329 NKX6-2Q9C056 277 aaPredicted RBP1.85□□□□□ -2.11
CHD8-212ENST00000557329 RNASE7Q9H1E1 156 aaKnown RBP1.85□□□□□ -2.11
CHD8-212ENST00000557329 MED28Q9H204 178 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms