RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 CPSF4LA6NMK7 179 aaKnown RBP-3.39□□□□□ -2.95
LINC00648-203ENST00000556923 UBE2D3P61077 147 aa-3.39□□□□□ -2.95
LINC00648-203ENST00000556923 UBE2D2P62837 147 aa-3.39□□□□□ -2.95
LINC00648-203ENST00000556923 NAA60Q9H7X0 242 aa-3.39□□□□□ -2.95
LINC00648-203ENST00000556923 OVOS2A0A0J9YW53 1432 aa-3.39□□□□□ -2.95
LINC00648-203ENST00000556923 OVOS2Q6IE36 1432 aa-3.39□□□□□ -2.95
LINC00648-203ENST00000556923 POLA1P09884 1462 aaPredicted RBP-3.4□□□□□ -2.95
LINC00648-203ENST00000556923 SYS1-DBNDD2H3BUS1 97 aa-3.4□□□□□ -2.95
LINC00648-203ENST00000556923 BAGE2Q86Y30 109 aa-3.4□□□□□ -2.95
LINC00648-203ENST00000556923 AQP10Q96PS8 301 aa-3.41□□□□□ -2.96
LINC00648-203ENST00000556923 PPIP5K1Q6PFW1 1433 aa-3.42□□□□□ -2.96
LINC00648-203ENST00000556923 HMGXB3Q12766 1538 aa-3.42□□□□□ -2.96
LINC00648-203ENST00000556923 UQCR11O14957 56 aa-3.42□□□□□ -2.96
LINC00648-203ENST00000556923 LINC00694P0DN24 101 aa-3.42□□□□□ -2.96
LINC00648-203ENST00000556923 COX8AP10176 69 aa-3.42□□□□□ -2.96
LINC00648-203ENST00000556923 DISP2A7MBM2 1401 aa-3.43□□□□□ -2.96
LINC00648-203ENST00000556923 TULP4Q9NRJ4 1543 aa-3.43□□□□□ -2.96
LINC00648-203ENST00000556923 ARHGEF12Q9NZN5 1544 aa-3.43□□□□□ -2.96
LINC00648-203ENST00000556923 ARAP2Q8WZ64 1704 aa-3.43□□□□□ -2.96
LINC00648-203ENST00000556923 SMIM15Q7Z3B0 74 aa-3.43□□□□□ -2.96
LINC00648-203ENST00000556923 KIAA0556O60303 1618 aa-3.44□□□□□ -2.96
LINC00648-203ENST00000556923 TRAV13-2A0A0B4J235 113 aa-3.44□□□□□ -2.96
LINC00648-203ENST00000556923 NBEAP1P0C6P0 100 aa-3.44□□□□□ -2.96
LINC00648-203ENST00000556923 LINC01600Q96MT4 127 aa-3.44□□□□□ -2.96
LINC00648-203ENST00000556923 ZNF518AQ6AHZ1 1483 aa-3.44□□□□□ -2.96
LINC00648-203ENST00000556923 SPEF2Q9C093 1822 aa-3.44□□□□□ -2.96
LINC00648-203ENST00000556923 FYCO1Q9BQS8 1478 aa-3.45□□□□□ -2.96
LINC00648-203ENST00000556923 F8VRH5 84 aa-3.45□□□□□ -2.96
LINC00648-203ENST00000556923 TTC9CQ8N5M4 171 aa-3.45□□□□□ -2.96
LINC00648-203ENST00000556923 AIF1LQ9BQI0 150 aa-3.45□□□□□ -2.96
LINC00648-203ENST00000556923 LINC00846Q9NV44 126 aa-3.45□□□□□ -2.96
LINC00648-203ENST00000556923 WDFY3Q8IZQ1 3526 aa-3.45□□□□□ -2.96
LINC00648-203ENST00000556923 DCHS1Q96JQ0 3298 aa-3.46□□□□□ -2.96
LINC00648-203ENST00000556923 SCIMPQ6UWF3 145 aa-3.46□□□□□ -2.96
LINC00648-203ENST00000556923 APOC3P02656 99 aa-3.47□□□□□ -2.96
LINC00648-203ENST00000556923 TSPAN19P0C672 248 aa-3.47□□□□□ -2.96
LINC00648-203ENST00000556923 TPPP2P59282 170 aa-3.47□□□□□ -2.96
LINC00648-203ENST00000556923 SPANXA1Q9NS26 97 aa-3.47□□□□□ -2.96
LINC00648-203ENST00000556923 RIMS1Q86UR5 1692 aaKnown RBP-3.47□□□□□ -2.97
LINC00648-203ENST00000556923 CFAP54Q96N23 3096 aa-3.48□□□□□ -2.97
LINC00648-203ENST00000556923 TRBV7-4A0A0J9YYF1 115 aa-3.48□□□□□ -2.97
LINC00648-203ENST00000556923 NEFHP12036 1026 aa-3.48□□□□□ -2.97
LINC00648-203ENST00000556923 FGF7P21781 194 aa-3.48□□□□□ -2.97
LINC00648-203ENST00000556923 WDFY4Q6ZS81 3184 aa-3.48□□□□□ -2.97
LINC00648-203ENST00000556923 SHANK2Q9UPX8 1470 aa-3.48□□□□□ -2.97
LINC00648-203ENST00000556923 PRG4Q92954 1404 aaPredicted RBP-3.49□□□□□ -2.97
LINC00648-203ENST00000556923 RPS29P62273 56 aaKnown RBP-3.49□□□□□ -2.97
LINC00648-203ENST00000556923 SPRR4Q96PI1 79 aa-3.49□□□□□ -2.97
LINC00648-203ENST00000556923 MAGI2Q86UL8 1455 aa-3.49□□□□□ -2.97
LINC00648-203ENST00000556923 EP400Q96L91 3159 aa-3.5□□□□□ -2.97
LINC00648-203ENST00000556923 RAPGEF6Q8TEU7 1601 aa-3.5□□□□□ -2.97
LINC00648-203ENST00000556923 TAC4Q86UU9 113 aa-3.5□□□□□ -2.97
LINC00648-203ENST00000556923 LELP1Q5T871 98 aa-3.51□□□□□ -2.97
LINC00648-203ENST00000556923 USMG5Q96IX5 58 aa-3.51□□□□□ -2.97
LINC00648-203ENST00000556923 LINC01558Q9Y6Z2 57 aa-3.51□□□□□ -2.97
LINC00648-203ENST00000556923 BTAF1O14981 1849 aa-3.51□□□□□ -2.97
LINC00648-203ENST00000556923 LINC00959A0A1B0GUT2 108 aa-3.52□□□□□ -2.97
LINC00648-203ENST00000556923 IGLC7A0M8Q6 106 aa-3.52□□□□□ -2.97
LINC00648-203ENST00000556923 NDUFA4L2Q9NRX3 87 aa-3.52□□□□□ -2.97
LINC00648-203ENST00000556923 VPS13CQ709C8 3753 aa-3.52□□□□□ -2.97
LINC00648-203ENST00000556923 ALKQ9UM73 1620 aa-3.52□□□□□ -2.97
LINC00648-203ENST00000556923 J3QR89 54 aa-3.53□□□□□ -2.97
LINC00648-203ENST00000556923 SMIM3Q9BZL3 60 aa-3.53□□□□□ -2.97
LINC00648-203ENST00000556923 MYOM3Q5VTT5 1437 aa-3.53□□□□□ -2.98
LINC00648-203ENST00000556923 WFDC13Q8IUB5 93 aa-3.54□□□□□ -2.98
LINC00648-203ENST00000556923 MRPL34Q9BQ48 92 aaKnown RBP-3.55□□□□□ -2.98
LINC00648-203ENST00000556923 GUCA1AP43080 201 aaPredicted RBP-3.56□□□□□ -2.98
LINC00648-203ENST00000556923 KCNRGQ8N5I3 272 aa-3.56□□□□□ -2.98
LINC00648-203ENST00000556923 H7BZZ5 65 aa-3.57□□□□□ -2.98
LINC00648-203ENST00000556923 SETBP1Q9Y6X0 1596 aa-3.58□□□□□ -2.98
LINC00648-203ENST00000556923 PRLHP81277 87 aa-3.58□□□□□ -2.98
LINC00648-203ENST00000556923 CDC42SE2Q9NRR3 84 aa-3.58□□□□□ -2.98
LINC00648-203ENST00000556923 CRIPTQ9P021 101 aa-3.58□□□□□ -2.98
LINC00648-203ENST00000556923 MARF1Q9Y4F3 1742 aaKnown RBP-3.58□□□□□ -2.98
LINC00648-203ENST00000556923 FRYLO94915 3013 aa-3.59□□□□□ -2.98
LINC00648-203ENST00000556923 GNG14A0A1W2PPG7 69 aa-3.59□□□□□ -2.98
LINC00648-203ENST00000556923 K7ERU9 68 aa-3.59□□□□□ -2.98
LINC00648-203ENST00000556923 DYNLRB1Q9NP97 96 aa-3.59□□□□□ -2.98
LINC00648-203ENST00000556923 PSME4Q14997 1843 aa-3.6□□□□□ -2.99
LINC00648-203ENST00000556923 HEPN1Q6WQI6 88 aa-3.6□□□□□ -2.99
LINC00648-203ENST00000556923 TMEM263Q8WUH6 116 aaKnown RBP-3.6□□□□□ -2.99
LINC00648-203ENST00000556923 MYH7P12883 1935 aa-3.61□□□□□ -2.99
LINC00648-203ENST00000556923 M0R2Z0 102 aa-3.61□□□□□ -2.99
LINC00648-203ENST00000556923 AKAP14Q86UN6 197 aa-3.61□□□□□ -2.99
LINC00648-203ENST00000556923 MGST2Q99735 147 aa-3.61□□□□□ -2.99
LINC00648-203ENST00000556923 MUC3AQ02505 3323 aa-3.61□□□□□ -2.99
LINC00648-203ENST00000556923 C10orf113Q5VZT2 155 aa-3.62□□□□□ -2.99
LINC00648-203ENST00000556923 GSKIPQ9P0R6 139 aa-3.62□□□□□ -2.99
LINC00648-203ENST00000556923 PIGBOS1A0A0B4J2F0 54 aa-3.63□□□□□ -2.99
LINC00648-203ENST00000556923 ARPC5O15511 151 aa-3.63□□□□□ -2.99
LINC00648-203ENST00000556923 SFT2D2O95562 160 aa-3.63□□□□□ -2.99
LINC00648-203ENST00000556923 TNP1P09430 55 aa-3.63□□□□□ -2.99
LINC00648-203ENST00000556923 NKTRP30414 1462 aaKnown RBP-3.63□□□□□ -2.99
LINC00648-203ENST00000556923 HMGN4O00479 90 aa-3.64□□□□□ -2.99
LINC00648-203ENST00000556923 CDKN2A-AS1Q9UH64 79 aa-3.64□□□□□ -2.99
LINC00648-203ENST00000556923 ANKRD30AQ9BXX3 1397 aa-3.64□□□□□ -2.99
LINC00648-203ENST00000556923 ABCC10Q5T3U5 1492 aa-3.65□□□□□ -2.99
LINC00648-203ENST00000556923 TRAV30A0A087WSZ9 112 aa-3.65□□□□□ -2.99
LINC00648-203ENST00000556923 Q8N8P6 123 aa-3.65□□□□□ -2.99
LINC00648-203ENST00000556923 TRBV7-3A0A075B6L6 115 aa-3.66□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms