RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 MT1HL1P0DM35 61 aa6.69□□□□□ -1.34
XRCC3-216ENST00000556682 RHEBQ15382 184 aa6.69□□□□□ -1.34
XRCC3-216ENST00000556682 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
XRCC3-216ENST00000556682 RPS10P5Q9NQ39 176 aa6.69□□□□□ -1.34
XRCC3-216ENST00000556682 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
XRCC3-216ENST00000556682 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 FABP9Q0Z7S8 132 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 SRSF9Q13242 221 aaKnown RBP eCLIP6.68□□□□□ -1.34
XRCC3-216ENST00000556682 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 FA2HQ7L5A8 372 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
XRCC3-216ENST00000556682 Q8IZM0 81 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 ALKBH7Q9BT30 221 aaPredicted RBP6.68□□□□□ -1.34
XRCC3-216ENST00000556682 SMCO4Q9NRQ5 59 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 PSORS1C2Q9UIG4 136 aa6.68□□□□□ -1.34
XRCC3-216ENST00000556682 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
XRCC3-216ENST00000556682 C10orf91Q5T1B1 145 aa6.67□□□□□ -1.34
XRCC3-216ENST00000556682 CDKN2A-AS1Q9UH64 79 aa6.67□□□□□ -1.34
XRCC3-216ENST00000556682 CARHSP1Q9Y2V2 147 aaKnown RBP6.67□□□□□ -1.34
XRCC3-216ENST00000556682 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
XRCC3-216ENST00000556682 CXCL5P42830 114 aa6.66□□□□□ -1.34
XRCC3-216ENST00000556682 FAM19A5Q7Z5A7 132 aaPredicted RBP6.66□□□□□ -1.34
XRCC3-216ENST00000556682 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
XRCC3-216ENST00000556682 TINCRA0A1B0GVN0 87 aa6.65□□□□□ -1.34
XRCC3-216ENST00000556682 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
XRCC3-216ENST00000556682 NDUFA5Q16718 116 aa6.65□□□□□ -1.34
XRCC3-216ENST00000556682 F8VRH5 84 aa6.64□□□□□ -1.35
XRCC3-216ENST00000556682 M0QXV9 152 aa6.64□□□□□ -1.35
XRCC3-216ENST00000556682 UBE2BP63146 152 aa6.64□□□□□ -1.35
XRCC3-216ENST00000556682 PMVKQ15126 192 aa6.64□□□□□ -1.35
XRCC3-216ENST00000556682 CST9LQ9H4G1 147 aa6.64□□□□□ -1.35
XRCC3-216ENST00000556682 SNAPINO95295 136 aa6.63□□□□□ -1.35
XRCC3-216ENST00000556682 APOC3P02656 99 aa6.63□□□□□ -1.35
XRCC3-216ENST00000556682 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
XRCC3-216ENST00000556682 SVBPQ8N300 66 aa6.63□□□□□ -1.35
XRCC3-216ENST00000556682 DIRC1Q969H9 104 aa6.63□□□□□ -1.35
XRCC3-216ENST00000556682 TRAPPC1Q9Y5R8 145 aa6.63□□□□□ -1.35
XRCC3-216ENST00000556682 H3BRM9 83 aa6.62□□□□□ -1.35
XRCC3-216ENST00000556682 IGLV7-43P04211 117 aa6.62□□□□□ -1.35
XRCC3-216ENST00000556682 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
XRCC3-216ENST00000556682 IGLV5-45A0A087WSX0 123 aa6.61□□□□□ -1.35
XRCC3-216ENST00000556682 SMIM1B2RUZ4 78 aa6.61□□□□□ -1.35
XRCC3-216ENST00000556682 LINC00614P0C842 121 aa6.61□□□□□ -1.35
XRCC3-216ENST00000556682 KRTAP10-8P60410 259 aa6.61□□□□□ -1.35
XRCC3-216ENST00000556682 RAB5BP61020 215 aa6.61□□□□□ -1.35
XRCC3-216ENST00000556682 LBHQ53QV2 105 aaPredicted RBP6.61□□□□□ -1.35
XRCC3-216ENST00000556682 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
XRCC3-216ENST00000556682 NDUFA6P56556 154 aa6.6□□□□□ -1.35
XRCC3-216ENST00000556682 XAGE1AQ9HD64 81 aa6.6□□□□□ -1.35
XRCC3-216ENST00000556682 HBDP02042 147 aa6.59□□□□□ -1.35
XRCC3-216ENST00000556682 ODF1Q14990 250 aa6.59□□□□□ -1.35
XRCC3-216ENST00000556682 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
XRCC3-216ENST00000556682 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
XRCC3-216ENST00000556682 C22orf24Q9Y442 160 aa6.59□□□□□ -1.35
XRCC3-216ENST00000556682 ATP5LO75964 103 aa6.58□□□□□ -1.36
XRCC3-216ENST00000556682 SPINK8P0C7L1 97 aa6.58□□□□□ -1.36
XRCC3-216ENST00000556682 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
XRCC3-216ENST00000556682 H0Y9J4 135 aa6.57□□□□□ -1.36
XRCC3-216ENST00000556682 NUPR1O60356 82 aa6.57□□□□□ -1.36
XRCC3-216ENST00000556682 IGLC3P0DOY3 106 aa6.57□□□□□ -1.36
XRCC3-216ENST00000556682 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
XRCC3-216ENST00000556682 MRPL55Q7Z7F7 128 aaKnown RBP6.56□□□□□ -1.36
XRCC3-216ENST00000556682 A0A096LNJ9 63 aa6.55□□□□□ -1.36
XRCC3-216ENST00000556682 BAGE3Q86Y29 109 aa6.55□□□□□ -1.36
XRCC3-216ENST00000556682 URB1-AS1Q96HZ7 61 aa6.55□□□□□ -1.36
XRCC3-216ENST00000556682 HMCN2Q8NDA2 5059 aa6.55□□□□□ -1.36
XRCC3-216ENST00000556682 IGLV1-50A0A075B6I6 118 aa6.54□□□□□ -1.36
XRCC3-216ENST00000556682 ZNF861PO60384 105 aa6.54□□□□□ -1.36
XRCC3-216ENST00000556682 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
XRCC3-216ENST00000556682 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
XRCC3-216ENST00000556682 TNXBP22105 4242 aa6.54□□□□□ -1.36
XRCC3-216ENST00000556682 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
XRCC3-216ENST00000556682 ZNF22P17026 224 aaPredicted RBP6.53□□□□□ -1.36
XRCC3-216ENST00000556682 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
XRCC3-216ENST00000556682 PRR26Q8N8Z3 221 aa6.53□□□□□ -1.36
XRCC3-216ENST00000556682 NKAPP1Q8N9T2 125 aa6.53□□□□□ -1.36
XRCC3-216ENST00000556682 CHCHD1Q96BP2 118 aaKnown RBP6.53□□□□□ -1.36
XRCC3-216ENST00000556682 PFN2P35080 140 aa6.52□□□□□ -1.37
XRCC3-216ENST00000556682 RPL13AP40429 203 aaKnown RBP6.52□□□□□ -1.37
XRCC3-216ENST00000556682 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
XRCC3-216ENST00000556682 COX17Q14061 63 aa6.52□□□□□ -1.37
XRCC3-216ENST00000556682 RPL37AP8A6NKH3 93 aa6.51□□□□□ -1.37
XRCC3-216ENST00000556682 BCE1O60756 84 aa6.51□□□□□ -1.37
XRCC3-216ENST00000556682 LINC00167Q96N53 147 aa6.51□□□□□ -1.37
XRCC3-216ENST00000556682 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
XRCC3-216ENST00000556682 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
XRCC3-216ENST00000556682 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
XRCC3-216ENST00000556682 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
XRCC3-216ENST00000556682 ERG28Q9UKR5 140 aa6.5□□□□□ -1.37
XRCC3-216ENST00000556682 TRAV12-1A0A0B4J245 112 aa6.49□□□□□ -1.37
XRCC3-216ENST00000556682 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
XRCC3-216ENST00000556682 HSBP1O75506 76 aa6.49□□□□□ -1.37
XRCC3-216ENST00000556682 KRTAP1-4P0C5Y4 121 aa6.49□□□□□ -1.37
XRCC3-216ENST00000556682 RPL24P83731 157 aaKnown RBP6.49□□□□□ -1.37
XRCC3-216ENST00000556682 YPEL4Q96NS1 127 aa6.49□□□□□ -1.37
XRCC3-216ENST00000556682 UBE2AP49459 152 aa6.48□□□□□ -1.37
XRCC3-216ENST00000556682 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
XRCC3-216ENST00000556682 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
XRCC3-216ENST00000556682 CBLN2Q8IUK8 224 aa6.47□□□□□ -1.37
XRCC3-216ENST00000556682 TMEM223A0PJW6 202 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms