RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 RBMY1A1P0DJD3 496 aaKnown RBP4.36□□□□□ -1.71
CPSF2-205ENST00000556622 RBMY1CP0DJD4 496 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 INSL3P51460 131 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 C10orf99Q6UWK7 81 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 Q6ZUT4 128 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 MUC4Q99102 2169 aa4.36□□□□□ -1.71
CPSF2-205ENST00000556622 NOTCH3Q9UM47 2321 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 IGHV3-73A0A0B4J1V6 119 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 TRGV4A0A0C4DH28 118 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 H7C2G1 150 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 COX7A2LO14548 114 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 DNAL4O96015 105 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 OPRPNQ99935 248 aaPredicted RBP4.35□□□□□ -1.71
CPSF2-205ENST00000556622 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 CDC42SE2Q9NRR3 84 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 FBN3Q75N90 2809 aa4.35□□□□□ -1.71
CPSF2-205ENST00000556622 AGRNO00468 2067 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 IGHV3-64A0A075B6Q5 118 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.34□□□□□ -1.71
CPSF2-205ENST00000556622 IGKV2-29A2NJV5 120 aaPredicted RBP4.34□□□□□ -1.71
CPSF2-205ENST00000556622 IBA57-AS1B1ANH7 110 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 CRPP02741 224 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 DEFB121Q5J5C9 76 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 LINC00242Q5T6M2 205 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 LINC00308Q8TCZ7 52 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 LITAFQ99732 161 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 Q9H8V8 135 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 XCL2Q9UBD3 114 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 CDKN2A-AS1Q9UH64 79 aa4.34□□□□□ -1.71
CPSF2-205ENST00000556622 PKD1L1Q8TDX9 2849 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 A0A1B0GX51 115 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 EDN2P20800 178 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 CXCL5P42830 114 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
CPSF2-205ENST00000556622 SS18Q15532 418 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 WFDC9Q8NEX5 89 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
CPSF2-205ENST00000556622 IGHV3OR16-12A0A075B7B8 117 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 TRAV8-3A0A0A6YYJ7 113 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 IGLV1-51P01701 117 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE5Q13069 117 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE6Q13070 117 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 COX17Q14061 63 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 DEFB136Q30KP8 78 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 ODF3L2Q3SX64 289 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 S100A7L2Q5SY68 101 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 C1orf158Q8N1D5 194 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 DAND5Q8N907 189 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
CPSF2-205ENST00000556622 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 RPL28P46779 137 aaKnown RBP4.31□□□□□ -1.72
CPSF2-205ENST00000556622 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
CPSF2-205ENST00000556622 NOP10Q9NPE3 64 aaKnown RBP4.31□□□□□ -1.72
CPSF2-205ENST00000556622 SELENOKQ9Y6D0 94 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 TRRAPQ9Y4A5 3859 aa4.31□□□□□ -1.72
CPSF2-205ENST00000556622 NOTCH1P46531 2555 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 A0A087WZ39 114 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE12JA6NER3 117 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 LYRM9A8MSI8 78 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE7O76087 117 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 PRB2P02812 416 aaPredicted RBP4.3□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE12FP0CL80 117 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE12GP0CL81 117 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE12IP0CL82 117 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 XGP55808 180 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 LINC00158P58513 81 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 GAGE4Q13068 117 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 C6orf226Q5I0X4 101 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 CEMP1Q6PRD7 247 aaPredicted RBP4.3□□□□□ -1.72
CPSF2-205ENST00000556622 C15orf53Q8NAA6 179 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 CHCHD5Q9BSY4 110 aa4.3□□□□□ -1.72
CPSF2-205ENST00000556622 ANK2Q01484 3957 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 VWFP04275 2813 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 TRBV7-7A0A0K0K1E9 115 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 JMJD7-PLA2G4BH0Y9G9 81 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 APOC4P55056 127 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
CPSF2-205ENST00000556622 Q6ZTI0 123 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 DEFB104AQ8WTQ1 72 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 FAM104AQ969W3 186 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 PRO0255Q9UI72 69 aa4.29□□□□□ -1.72
CPSF2-205ENST00000556622 TEX49A0A1B0GTD5 131 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 F5H768 121 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 NDUFC2O95298 119 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 BAALC-AS2P0C853 105 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
CPSF2-205ENST00000556622 C9orf66Q5T8R8 295 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 Q8IZM0 81 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms