RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
SDR39U1-220ENST00000556548 NDUFA1O15239 70 aa12.6□□□□□ -0.39
SDR39U1-220ENST00000556548 Q6Q795 121 aa12.6□□□□□ -0.39
SDR39U1-220ENST00000556548 ANKRD29Q8N6D5 301 aa12.6□□□□□ -0.39
SDR39U1-220ENST00000556548 TOMM7Q9P0U1 55 aa12.6□□□□□ -0.39
SDR39U1-220ENST00000556548 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
SDR39U1-220ENST00000556548 A4D1N5 150 aa12.59□□□□□ -0.39
SDR39U1-220ENST00000556548 ANGP03950 147 aaKnown RBP12.59□□□□□ -0.39
SDR39U1-220ENST00000556548 CFC1BP0CG36 223 aa12.59□□□□□ -0.39
SDR39U1-220ENST00000556548 CFC1P0CG37 223 aa12.59□□□□□ -0.39
SDR39U1-220ENST00000556548 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
SDR39U1-220ENST00000556548 K7EIL1 84 aa12.59□□□□□ -0.39
SDR39U1-220ENST00000556548 TCL1BO95988 128 aa12.58□□□□□ -0.4
SDR39U1-220ENST00000556548 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
SDR39U1-220ENST00000556548 IGLV10-54A0A075B6I4 117 aa12.57□□□□□ -0.4
SDR39U1-220ENST00000556548 KPRPQ5T749 579 aaPredicted RBP12.57□□□□□ -0.4
SDR39U1-220ENST00000556548 SCGB1C2P0DMR2 95 aa12.56□□□□□ -0.4
SDR39U1-220ENST00000556548 SS18Q15532 418 aa12.56□□□□□ -0.4
SDR39U1-220ENST00000556548 LELP1Q5T871 98 aa12.56□□□□□ -0.4
SDR39U1-220ENST00000556548 LYPD5Q6UWN5 251 aa12.56□□□□□ -0.4
SDR39U1-220ENST00000556548 C11orf45Q8TAV5 145 aa12.56□□□□□ -0.4
SDR39U1-220ENST00000556548 M0QXV9 152 aa12.55□□□□□ -0.4
SDR39U1-220ENST00000556548 EIF4EBP3O60516 100 aaPredicted RBP12.55□□□□□ -0.4
SDR39U1-220ENST00000556548 COX7B2Q8TF08 81 aa12.55□□□□□ -0.4
SDR39U1-220ENST00000556548 MIAQ16674 131 aa12.54□□□□□ -0.4
SDR39U1-220ENST00000556548 A0A087WZ39 114 aa12.54□□□□□ -0.4
SDR39U1-220ENST00000556548 REG3AQ06141 175 aa12.54□□□□□ -0.4
SDR39U1-220ENST00000556548 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
SDR39U1-220ENST00000556548 SPANXDQ9BXN6 97 aa12.54□□□□□ -0.4
SDR39U1-220ENST00000556548 SPANXCQ9NY87 97 aa12.54□□□□□ -0.4
SDR39U1-220ENST00000556548 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
SDR39U1-220ENST00000556548 H7C2G1 150 aa12.52□□□□□ -0.41
SDR39U1-220ENST00000556548 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
SDR39U1-220ENST00000556548 SLC25A20O43772 301 aa12.51□□□□□ -0.41
SDR39U1-220ENST00000556548 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
SDR39U1-220ENST00000556548 TMEM126AQ9H061 195 aa12.51□□□□□ -0.41
SDR39U1-220ENST00000556548 CHCHD10Q8WYQ3 142 aaPredicted RBP12.5□□□□□ -0.41
SDR39U1-220ENST00000556548 PRO1854Q9UHT4 67 aa12.5□□□□□ -0.41
SDR39U1-220ENST00000556548 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
SDR39U1-220ENST00000556548 TIMM17BO60830 172 aa12.5□□□□□ -0.41
SDR39U1-220ENST00000556548 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
SDR39U1-220ENST00000556548 WFDC10BQ8IUB3 73 aa12.48□□□□□ -0.41
SDR39U1-220ENST00000556548 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
SDR39U1-220ENST00000556548 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
SDR39U1-220ENST00000556548 C9JAW5 83 aa12.47□□□□□ -0.41
SDR39U1-220ENST00000556548 H3BNG1 76 aa12.47□□□□□ -0.41
SDR39U1-220ENST00000556548 C6orf226Q5I0X4 101 aa12.47□□□□□ -0.41
SDR39U1-220ENST00000556548 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
SDR39U1-220ENST00000556548 ESRGQ1W209 222 aa12.46□□□□□ -0.41
SDR39U1-220ENST00000556548 LINC00308Q8TCZ7 52 aa12.46□□□□□ -0.41
SDR39U1-220ENST00000556548 CD164L2Q6UWJ8 174 aa12.46□□□□□ -0.41
SDR39U1-220ENST00000556548 A0A0B4J2C4 111 aa12.45□□□□□ -0.42
SDR39U1-220ENST00000556548 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
SDR39U1-220ENST00000556548 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
SDR39U1-220ENST00000556548 COX7A2LO14548 114 aa12.45□□□□□ -0.42
SDR39U1-220ENST00000556548 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
SDR39U1-220ENST00000556548 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
SDR39U1-220ENST00000556548 Q1RN00 199 aa12.44□□□□□ -0.42
SDR39U1-220ENST00000556548 ENHOQ6UWT2 76 aa12.44□□□□□ -0.42
SDR39U1-220ENST00000556548 MALP21145 153 aa12.43□□□□□ -0.42
SDR39U1-220ENST00000556548 PFN2P35080 140 aa12.43□□□□□ -0.42
SDR39U1-220ENST00000556548 NTN5Q8WTR8 489 aaPredicted RBP12.43□□□□□ -0.42
SDR39U1-220ENST00000556548 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
SDR39U1-220ENST00000556548 LINC00158P58513 81 aa12.42□□□□□ -0.42
SDR39U1-220ENST00000556548 RPL13AP40429 203 aaKnown RBP12.42□□□□□ -0.42
SDR39U1-220ENST00000556548 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
SDR39U1-220ENST00000556548 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
SDR39U1-220ENST00000556548 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
SDR39U1-220ENST00000556548 LINC01600Q96MT4 127 aa12.4□□□□□ -0.42
SDR39U1-220ENST00000556548 CRPP02741 224 aa12.39□□□□□ -0.43
SDR39U1-220ENST00000556548 C5orf47Q569G3 176 aa12.39□□□□□ -0.43
SDR39U1-220ENST00000556548 Q8IZM0 81 aa12.39□□□□□ -0.43
SDR39U1-220ENST00000556548 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
SDR39U1-220ENST00000556548 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
SDR39U1-220ENST00000556548 TEX49A0A1B0GTD5 131 aa12.37□□□□□ -0.43
SDR39U1-220ENST00000556548 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
SDR39U1-220ENST00000556548 ATXN8Q156A1 80 aa12.37□□□□□ -0.43
SDR39U1-220ENST00000556548 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
SDR39U1-220ENST00000556548 IBA57-AS1B1ANH7 110 aa12.36□□□□□ -0.43
SDR39U1-220ENST00000556548 LINC01620Q4KN68 170 aa12.36□□□□□ -0.43
SDR39U1-220ENST00000556548 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
SDR39U1-220ENST00000556548 TRIAP1O43715 76 aa12.34□□□□□ -0.43
SDR39U1-220ENST00000556548 COPS9Q8WXC6 57 aa12.34□□□□□ -0.43
SDR39U1-220ENST00000556548 TRBV10-2A0A0K0K1G8 114 aa12.34□□□□□ -0.43
SDR39U1-220ENST00000556548 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
SDR39U1-220ENST00000556548 TRBV7-7A0A0K0K1E9 115 aa12.33□□□□□ -0.44
SDR39U1-220ENST00000556548 FAM240AA0A1B0GVK7 77 aa12.32□□□□□ -0.44
SDR39U1-220ENST00000556548 CCL18P55774 89 aa12.32□□□□□ -0.44
SDR39U1-220ENST00000556548 SPAG11BQ08648 103 aa12.32□□□□□ -0.44
SDR39U1-220ENST00000556548 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
SDR39U1-220ENST00000556548 STAB2Q8WWQ8 2551 aa12.32□□□□□ -0.44
SDR39U1-220ENST00000556548 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
SDR39U1-220ENST00000556548 C10orf25Q5T742 122 aa12.31□□□□□ -0.44
SDR39U1-220ENST00000556548 UNQ6190/PRO20217Q6UXQ8 127 aa12.29□□□□□ -0.44
SDR39U1-220ENST00000556548 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
SDR39U1-220ENST00000556548 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
SDR39U1-220ENST00000556548 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
SDR39U1-220ENST00000556548 LINC01556Q5JQF7 62 aa12.28□□□□□ -0.44
SDR39U1-220ENST00000556548 LYSTQ99698 3801 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 IGKV2-28A0A075B6P5 120 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms