RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PRRC2AP48634 2157 aaKnown RBP4□□□□□ -1.77
TDP1-215ENST00000556498 ARFGEF3Q5TH69 2177 aa4□□□□□ -1.77
TDP1-215ENST00000556498 ESPL1Q14674 2120 aa4□□□□□ -1.77
TDP1-215ENST00000556498 BRCA2P51587 3418 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 IGKV2-40A0A087WW87 121 aaPredicted RBP3.99□□□□□ -1.77
TDP1-215ENST00000556498 PLXNB1O43157 2135 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 IGKV2D-40P01614 121 aaPredicted RBP3.99□□□□□ -1.77
TDP1-215ENST00000556498 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 STATHP02808 62 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 PLA2G2AP14555 144 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 LINC00483Q53H64 154 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 DEFB119Q8N690 84 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 Q8TAT8 98 aa3.99□□□□□ -1.77
TDP1-215ENST00000556498 MED12Q93074 2177 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 IGHV4-30-2A0A087WSY4 118 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 TRBV6-4A0A1B0GX49 114 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 A6NDX4 124 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 H0YGG7 62 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 MRPL33O75394 65 aaKnown RBP3.98□□□□□ -1.77
TDP1-215ENST00000556498 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 WT1-ASQ06250 92 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 TMEM105Q8N8V8 129 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 Q8N9W7 124 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 C7orf33Q8WU49 177 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 CENPFP49454 3210 aa3.98□□□□□ -1.77
TDP1-215ENST00000556498 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
TDP1-215ENST00000556498 RPL37AP8A6NKH3 93 aa3.97□□□□□ -1.77
TDP1-215ENST00000556498 RPL39P5Q59GN2 51 aa3.97□□□□□ -1.77
TDP1-215ENST00000556498 SPRR4Q96PI1 79 aa3.97□□□□□ -1.77
TDP1-215ENST00000556498 PRR34Q9NV39 138 aa3.97□□□□□ -1.77
TDP1-215ENST00000556498 CACNA1CQ13936 2221 aa3.97□□□□□ -1.77
TDP1-215ENST00000556498 FREM1Q5H8C1 2179 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 CCL18P55774 89 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 LINC00158P58513 81 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 LINC00315P59091 139 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 DEFB133Q30KQ1 61 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 LINC00575Q6W349 94 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 DEFB126Q9BYW3 111 aa3.96□□□□□ -1.78
TDP1-215ENST00000556498 F5P12259 2224 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 CEP350Q5VT06 3117 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 PCNTO95613 3336 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 IGLV11-55A0A075B6I3 123 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 P0C880 135 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 LINC01006Q8NI28 216 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 PATE1Q8WXA2 126 aa3.95□□□□□ -1.78
TDP1-215ENST00000556498 PI4KAP42356 2102 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 TRIOBPQ9H2D6 2365 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 DEFB108AA8MXU0 73 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 ODF3BA8MYP8 253 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 KRTAP10-11P60412 298 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 MUC4Q99102 2169 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 PDE4DIPQ5VU43 2346 aa3.94□□□□□ -1.78
TDP1-215ENST00000556498 IGKV3D-11A0A0A0MRZ8 115 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 PRAC2D3DTV9 90 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 I3L2K1 104 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 M0QY20 66 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 RNASE3P12724 160 aaKnown RBP3.93□□□□□ -1.78
TDP1-215ENST00000556498 DEFB113Q30KQ7 82 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 CDKN2A-AS1Q9UH64 79 aa3.93□□□□□ -1.78
TDP1-215ENST00000556498 DNAH12Q6ZR08 3092 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 CEP290O15078 2479 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 LINC00959A0A1B0GUT2 108 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 SMIM1B2RUZ4 78 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 IGKV3-20P01619 116 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 CCL3L1P16619 93 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 LEAP2Q969E1 77 aa3.92□□□□□ -1.78
TDP1-215ENST00000556498 TET2Q6N021 2002 aaPredicted RBP3.92□□□□□ -1.78
TDP1-215ENST00000556498 ARHGAP32A7KAX9 2087 aa3.91□□□□□ -1.78
TDP1-215ENST00000556498 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
TDP1-215ENST00000556498 DEFB110Q30KQ9 67 aa3.91□□□□□ -1.78
TDP1-215ENST00000556498 U3KQA8 63 aa3.91□□□□□ -1.78
TDP1-215ENST00000556498 MKI67P46013 3256 aaKnown RBP3.91□□□□□ -1.78
TDP1-215ENST00000556498 DEFB131BA0A096LNP1 70 aa3.9□□□□□ -1.79
TDP1-215ENST00000556498 ZNF861PO60384 105 aa3.9□□□□□ -1.79
TDP1-215ENST00000556498 LINC00612Q8N6U2 182 aa3.9□□□□□ -1.79
TDP1-215ENST00000556498 RNF5Q99942 180 aa3.9□□□□□ -1.79
TDP1-215ENST00000556498 DHRS4-AS1Q9P1J3 65 aa3.9□□□□□ -1.79
TDP1-215ENST00000556498 BRWD1Q9NSI6 2320 aa3.89□□□□□ -1.79
TDP1-215ENST00000556498 A0A1B0GVX0 72 aa3.89□□□□□ -1.79
TDP1-215ENST00000556498 COX17Q14061 63 aa3.89□□□□□ -1.79
TDP1-215ENST00000556498 Q6ZQY7 126 aa3.89□□□□□ -1.79
TDP1-215ENST00000556498 ZGRF1Q86YA3 2104 aa3.89□□□□□ -1.79
TDP1-215ENST00000556498 K7EIM0 57 aa3.88□□□□□ -1.79
TDP1-215ENST00000556498 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
TDP1-215ENST00000556498 ST20-AS1Q8NBB2 130 aa3.88□□□□□ -1.79
TDP1-215ENST00000556498 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
TDP1-215ENST00000556498 IGKV3-7A0A075B6H7 116 aa3.87□□□□□ -1.79
TDP1-215ENST00000556498 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
TDP1-215ENST00000556498 M0R2N4 97 aa3.87□□□□□ -1.79
TDP1-215ENST00000556498 TLX1NBP0CAT3 122 aa3.87□□□□□ -1.79
TDP1-215ENST00000556498 Q5W150 140 aa3.87□□□□□ -1.79
TDP1-215ENST00000556498 TECTAO75443 2155 aa3.86□□□□□ -1.79
TDP1-215ENST00000556498 CHD9Q3L8U1 2897 aa3.86□□□□□ -1.79
TDP1-215ENST00000556498 SPINK14Q6IE38 97 aa3.86□□□□□ -1.79
TDP1-215ENST00000556498 Q8IZM0 81 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms