RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
CHMP4BP1-201ENST00000556017 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
CHMP4BP1-201ENST00000556017 CKS1BP61024 79 aa8.36□□□□□ -1.07
CHMP4BP1-201ENST00000556017 PEA15Q15121 130 aa8.36□□□□□ -1.07
CHMP4BP1-201ENST00000556017 LINC00167Q96N53 147 aa8.36□□□□□ -1.07
CHMP4BP1-201ENST00000556017 C2orf88Q9BSF0 95 aa8.36□□□□□ -1.07
CHMP4BP1-201ENST00000556017 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
CHMP4BP1-201ENST00000556017 VCX2Q9H322 139 aa8.36□□□□□ -1.07
CHMP4BP1-201ENST00000556017 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
CHMP4BP1-201ENST00000556017 F8VRH5 84 aa8.35□□□□□ -1.07
CHMP4BP1-201ENST00000556017 NPSP0C0P6 89 aa8.35□□□□□ -1.07
CHMP4BP1-201ENST00000556017 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
CHMP4BP1-201ENST00000556017 TYMSOSQ8TAI1 123 aa8.35□□□□□ -1.07
CHMP4BP1-201ENST00000556017 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
CHMP4BP1-201ENST00000556017 PRSS2P07478 247 aa8.34□□□□□ -1.07
CHMP4BP1-201ENST00000556017 CRYGAP11844 174 aa8.34□□□□□ -1.07
CHMP4BP1-201ENST00000556017 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
CHMP4BP1-201ENST00000556017 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
CHMP4BP1-201ENST00000556017 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
CHMP4BP1-201ENST00000556017 SMIM1B2RUZ4 78 aa8.33□□□□□ -1.08
CHMP4BP1-201ENST00000556017 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
CHMP4BP1-201ENST00000556017 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
CHMP4BP1-201ENST00000556017 HERVK_113P63121 156 aa8.32□□□□□ -1.08
CHMP4BP1-201ENST00000556017 ORMDL2Q53FV1 153 aa8.32□□□□□ -1.08
CHMP4BP1-201ENST00000556017 IGLV5-45A0A087WSX0 123 aa8.3□□□□□ -1.08
CHMP4BP1-201ENST00000556017 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
CHMP4BP1-201ENST00000556017 K7EMI3 77 aa8.3□□□□□ -1.08
CHMP4BP1-201ENST00000556017 TOMM6Q96B49 74 aa8.3□□□□□ -1.08
CHMP4BP1-201ENST00000556017 TIMM17AQ99595 171 aa8.3□□□□□ -1.08
CHMP4BP1-201ENST00000556017 KRTAP9-6A0A140TA67 174 aa8.29□□□□□ -1.08
CHMP4BP1-201ENST00000556017 SCO1O75880 301 aa8.29□□□□□ -1.08
CHMP4BP1-201ENST00000556017 ADCYAP1P18509 176 aa8.28□□□□□ -1.08
CHMP4BP1-201ENST00000556017 CXCL5P42830 114 aa8.28□□□□□ -1.08
CHMP4BP1-201ENST00000556017 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
CHMP4BP1-201ENST00000556017 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
CHMP4BP1-201ENST00000556017 SEC11AP67812 179 aa8.27□□□□□ -1.09
CHMP4BP1-201ENST00000556017 PNRC1Q12796 327 aaPredicted RBP8.27□□□□□ -1.09
CHMP4BP1-201ENST00000556017 PDZD11Q5EBL8 140 aa8.27□□□□□ -1.09
CHMP4BP1-201ENST00000556017 COX7B2Q8TF08 81 aa8.27□□□□□ -1.09
CHMP4BP1-201ENST00000556017 GEMIN7Q9H840 131 aaKnown RBP8.27□□□□□ -1.09
CHMP4BP1-201ENST00000556017 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
CHMP4BP1-201ENST00000556017 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
CHMP4BP1-201ENST00000556017 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
CHMP4BP1-201ENST00000556017 ERASQ7Z444 233 aa8.25□□□□□ -1.09
CHMP4BP1-201ENST00000556017 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
CHMP4BP1-201ENST00000556017 RAB5BP61020 215 aa8.24□□□□□ -1.09
CHMP4BP1-201ENST00000556017 KIAA1644Q3SXP7 199 aa8.24□□□□□ -1.09
CHMP4BP1-201ENST00000556017 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
CHMP4BP1-201ENST00000556017 Q8NDZ9 215 aa8.24□□□□□ -1.09
CHMP4BP1-201ENST00000556017 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
CHMP4BP1-201ENST00000556017 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
CHMP4BP1-201ENST00000556017 IGKV2-28A0A075B6P5 120 aa8.23□□□□□ -1.09
CHMP4BP1-201ENST00000556017 LINC01546A6NGU7 62 aa8.23□□□□□ -1.09
CHMP4BP1-201ENST00000556017 IGKV2D-28P01615 120 aa8.23□□□□□ -1.09
CHMP4BP1-201ENST00000556017 SPINK8P0C7L1 97 aa8.23□□□□□ -1.09
CHMP4BP1-201ENST00000556017 PRLHP81277 87 aa8.23□□□□□ -1.09
CHMP4BP1-201ENST00000556017 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 MT-ND4LP03901 98 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 VPREB1P12018 145 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 UBE2AP49459 152 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 SCGB3A1Q96QR1 104 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
CHMP4BP1-201ENST00000556017 TMEM238C9JI98 176 aa8.21□□□□□ -1.1
CHMP4BP1-201ENST00000556017 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
CHMP4BP1-201ENST00000556017 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
CHMP4BP1-201ENST00000556017 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
CHMP4BP1-201ENST00000556017 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
CHMP4BP1-201ENST00000556017 TMEM126AQ9H061 195 aa8.2□□□□□ -1.1
CHMP4BP1-201ENST00000556017 M0R378 163 aa8.19□□□□□ -1.1
CHMP4BP1-201ENST00000556017 G0S2P27469 103 aa8.19□□□□□ -1.1
CHMP4BP1-201ENST00000556017 CTAG1AP78358 180 aa8.19□□□□□ -1.1
CHMP4BP1-201ENST00000556017 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
CHMP4BP1-201ENST00000556017 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
CHMP4BP1-201ENST00000556017 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
CHMP4BP1-201ENST00000556017 PPDPFQ9H3Y8 114 aa8.17□□□□□ -1.1
CHMP4BP1-201ENST00000556017 PFN2P35080 140 aa8.16□□□□□ -1.1
CHMP4BP1-201ENST00000556017 PMVKQ15126 192 aa8.16□□□□□ -1.1
CHMP4BP1-201ENST00000556017 FAM19A1Q7Z5A9 133 aa8.16□□□□□ -1.1
CHMP4BP1-201ENST00000556017 A0A096LNJ9 63 aa8.15□□□□□ -1.1
CHMP4BP1-201ENST00000556017 IGLC3P0DOY3 106 aa8.15□□□□□ -1.1
CHMP4BP1-201ENST00000556017 ATP5LO75964 103 aa8.14□□□□□ -1.11
CHMP4BP1-201ENST00000556017 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
CHMP4BP1-201ENST00000556017 ERG28Q9UKR5 140 aa8.14□□□□□ -1.11
CHMP4BP1-201ENST00000556017 ZNF22P17026 224 aaPredicted RBP8.13□□□□□ -1.11
CHMP4BP1-201ENST00000556017 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
CHMP4BP1-201ENST00000556017 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
CHMP4BP1-201ENST00000556017 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
CHMP4BP1-201ENST00000556017 TRAV9-1A0A075B6T8 112 aa8.11□□□□□ -1.11
CHMP4BP1-201ENST00000556017 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
CHMP4BP1-201ENST00000556017 CBLN2Q8IUK8 224 aa8.11□□□□□ -1.11
CHMP4BP1-201ENST00000556017 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
CHMP4BP1-201ENST00000556017 H3BRM9 83 aa8.1□□□□□ -1.11
CHMP4BP1-201ENST00000556017 COX17Q14061 63 aa8.1□□□□□ -1.11
CHMP4BP1-201ENST00000556017 ZNF625Q96I27 306 aaPredicted RBP8.1□□□□□ -1.11
CHMP4BP1-201ENST00000556017 RAB14P61106 215 aa8.09□□□□□ -1.11
CHMP4BP1-201ENST00000556017 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
CHMP4BP1-201ENST00000556017 HIGD2AQ9BW72 106 aa8.09□□□□□ -1.11
CHMP4BP1-201ENST00000556017 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
CHMP4BP1-201ENST00000556017 SPAG11AQ6PDA7 123 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms