RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 NDUFC1O43677 76 aa5.38□□□□□ -1.55
CHD8-209ENST00000555935 CMC4P56277 68 aaPredicted RBP5.38□□□□□ -1.55
CHD8-209ENST00000555935 CXCL6P80162 114 aa5.38□□□□□ -1.55
CHD8-209ENST00000555935 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
CHD8-209ENST00000555935 CEP295Q9C0D2 2601 aa5.37□□□□□ -1.55
CHD8-209ENST00000555935 A0A1B0GUV1 79 aa5.37□□□□□ -1.55
CHD8-209ENST00000555935 GNLYP22749 145 aa5.37□□□□□ -1.55
CHD8-209ENST00000555935 C6orf99Q4VX62 202 aa5.37□□□□□ -1.55
CHD8-209ENST00000555935 CELSR1Q9NYQ6 3014 aa5.37□□□□□ -1.55
CHD8-209ENST00000555935 Q6ZVQ6 151 aa5.37□□□□□ -1.55
CHD8-209ENST00000555935 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
CHD8-209ENST00000555935 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
CHD8-209ENST00000555935 C9orf66Q5T8R8 295 aa5.36□□□□□ -1.55
CHD8-209ENST00000555935 MUC7Q8TAX7 377 aa5.36□□□□□ -1.55
CHD8-209ENST00000555935 IGHV4-28A0A0C4DH34 117 aa5.36□□□□□ -1.55
CHD8-209ENST00000555935 GIG44P09565 113 aaPredicted RBP5.36□□□□□ -1.55
CHD8-209ENST00000555935 HAMPP81172 84 aa5.36□□□□□ -1.55
CHD8-209ENST00000555935 LAMTOR3Q9UHA4 124 aa5.36□□□□□ -1.55
CHD8-209ENST00000555935 CSPG4Q6UVK1 2322 aa5.35□□□□□ -1.55
CHD8-209ENST00000555935 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
CHD8-209ENST00000555935 LINC00336Q6ZUF6 198 aa5.35□□□□□ -1.55
CHD8-209ENST00000555935 ATRXP46100 2492 aa5.35□□□□□ -1.55
CHD8-209ENST00000555935 TRAV10A0A0B4J240 114 aa5.34□□□□□ -1.55
CHD8-209ENST00000555935 F8WEM9 126 aa5.34□□□□□ -1.55
CHD8-209ENST00000555935 CD164L2Q6UWJ8 174 aa5.34□□□□□ -1.55
CHD8-209ENST00000555935 RMI2Q96E14 147 aa5.34□□□□□ -1.55
CHD8-209ENST00000555935 C16orf95Q9H693 158 aa5.34□□□□□ -1.55
CHD8-209ENST00000555935 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
CHD8-209ENST00000555935 FP248Q71RG6 208 aaPredicted RBP5.33□□□□□ -1.56
CHD8-209ENST00000555935 CSNK1G2-AS1Q8NCQ2 148 aa5.33□□□□□ -1.56
CHD8-209ENST00000555935 TRBV7-4A0A0J9YYF1 115 aa5.32□□□□□ -1.56
CHD8-209ENST00000555935 Q8N3U1 123 aa5.32□□□□□ -1.56
CHD8-209ENST00000555935 M0R2N4 97 aa5.32□□□□□ -1.56
CHD8-209ENST00000555935 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
CHD8-209ENST00000555935 TRBV7-6A0A0J9YX20 115 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 CCL24O00175 119 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 IGLV6-57P01721 117 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 MIFP14174 115 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 PLA2G2AP14555 144 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 GYPEP15421 78 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 ZNF843Q8N446 348 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 Q8NDZ9 215 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
CHD8-209ENST00000555935 IGHV4-31P0DP07 118 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 RPL35AP18077 110 aaKnown RBP5.3□□□□□ -1.56
CHD8-209ENST00000555935 CLPSL2Q6UWE3 100 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.3□□□□□ -1.56
CHD8-209ENST00000555935 Q6ZQY7 126 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 LINC00612Q8N6U2 182 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
CHD8-209ENST00000555935 C2CD3Q4AC94 2353 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 NREPQ16612 68 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 MAPK1IP1LQ8NDC0 245 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 SPATA3Q8NHX4 192 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 TM2D3Q9BRN9 247 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 IGF2RP11717 2491 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 MUC6Q6W4X9 2439 aa5.3□□□□□ -1.56
CHD8-209ENST00000555935 C9orf116Q5BN46 136 aaPredicted RBP5.29□□□□□ -1.56
CHD8-209ENST00000555935 LINC00269Q8N2A0 174 aa5.29□□□□□ -1.56
CHD8-209ENST00000555935 C1orf43Q9BWL3 253 aa5.29□□□□□ -1.56
CHD8-209ENST00000555935 TMEM254Q8TBM7 123 aa5.29□□□□□ -1.56
CHD8-209ENST00000555935 C19orf73Q9NVV2 129 aa5.29□□□□□ -1.56
CHD8-209ENST00000555935 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 PRO0255Q9UI72 69 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 A0A0J9YWU9 116 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 BPY2O14599 106 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 IGHV4-30-4P0DP06 118 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 DEFB130BP0DP73 79 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 DEFB130AP0DP74 79 aa5.28□□□□□ -1.56
CHD8-209ENST00000555935 WFDC10AQ9H1F0 79 aa5.27□□□□□ -1.57
CHD8-209ENST00000555935 IGLV1-51P01701 117 aa5.27□□□□□ -1.57
CHD8-209ENST00000555935 REG3AQ06141 175 aa5.27□□□□□ -1.57
CHD8-209ENST00000555935 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
CHD8-209ENST00000555935 WFDC11Q8NEX6 87 aa5.27□□□□□ -1.57
CHD8-209ENST00000555935 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
CHD8-209ENST00000555935 CRYBG3Q68DQ2 2970 aa5.26□□□□□ -1.57
CHD8-209ENST00000555935 SPG11Q96JI7 2443 aa5.26□□□□□ -1.57
CHD8-209ENST00000555935 ANGP03950 147 aaKnown RBP5.26□□□□□ -1.57
CHD8-209ENST00000555935 COX7BP24311 80 aa5.26□□□□□ -1.57
CHD8-209ENST00000555935 SCXQ7RTU7 201 aa5.26□□□□□ -1.57
CHD8-209ENST00000555935 LINC01006Q8NI28 216 aa5.26□□□□□ -1.57
CHD8-209ENST00000555935 VPS13CQ709C8 3753 aa5.26□□□□□ -1.57
CHD8-209ENST00000555935 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
CHD8-209ENST00000555935 IGLV10-54A0A075B6I4 117 aa5.25□□□□□ -1.57
CHD8-209ENST00000555935 F8WDY8 70 aa5.25□□□□□ -1.57
CHD8-209ENST00000555935 PRYO14603 147 aa5.25□□□□□ -1.57
CHD8-209ENST00000555935 ELOF1P60002 83 aaKnown RBP5.25□□□□□ -1.57
CHD8-209ENST00000555935 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
CHD8-209ENST00000555935 UNQ6190/PRO20217Q6UXQ8 127 aa5.25□□□□□ -1.57
CHD8-209ENST00000555935 A0A0U1RQV1 116 aa5.25□□□□□ -1.57
CHD8-209ENST00000555935 ZNF73O43830 326 aaPredicted RBP5.25□□□□□ -1.57
CHD8-209ENST00000555935 BBC3Q96PG8 261 aaPredicted RBP5.25□□□□□ -1.57
CHD8-209ENST00000555935 NOTCH3Q9UM47 2321 aa5.24□□□□□ -1.57
CHD8-209ENST00000555935 CYSRT1A8MQ03 144 aa5.24□□□□□ -1.57
CHD8-209ENST00000555935 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
CHD8-209ENST00000555935 PKIGQ9Y2B9 76 aa5.24□□□□□ -1.57
CHD8-209ENST00000555935 A0A096LPF7 62 aa5.24□□□□□ -1.57
CHD8-209ENST00000555935 OCR1Q9BZK8 76 aa5.24□□□□□ -1.57
CHD8-209ENST00000555935 IGKV4-1P06312 121 aa5.23□□□□□ -1.57
CHD8-209ENST00000555935 FUSP35637 526 aaKnown RBP eCLIP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms