RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 SPTBN4Q9H254 2564 aa5.83□□□□□ -1.48
SYNE2-220ENST00000555612 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
SYNE2-220ENST00000555612 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 Q8N2B8 174 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 EXPH5Q8NEV8 1989 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 SBSPONQ8IVN8 264 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 ADAMTS20P59510 1910 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 NDUFC2-KCTD14E9PQ53 114 aa5.82□□□□□ -1.48
SYNE2-220ENST00000555612 MRPL55Q7Z7F7 128 aaKnown RBP5.82□□□□□ -1.48
SYNE2-220ENST00000555612 CHD9Q3L8U1 2897 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 K7ERS5 55 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 BEAN1Q3B7T3 259 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 MUC4Q99102 2169 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 IGHV6-1A0A0B4J1U7 121 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 WDR87Q6ZQQ6 2873 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 Q6ZVQ6 151 aa5.81□□□□□ -1.48
SYNE2-220ENST00000555612 SETD2Q9BYW2 2564 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-220ENST00000555612 FAM236DA0A1B0GTK5 79 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 NDUFC2O95298 119 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 FAM236CP0DP71 79 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 ESRGQ1W209 222 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 Q9BRP9 147 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 Q8N9L7 120 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 Q6ZRU5 148 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 PRR4Q16378 134 aa5.8□□□□□ -1.48
SYNE2-220ENST00000555612 HCFC1P51610 2035 aa5.79□□□□□ -1.48
SYNE2-220ENST00000555612 C2orf48Q96LS8 159 aa5.79□□□□□ -1.48
SYNE2-220ENST00000555612 PRLHP81277 87 aa5.79□□□□□ -1.48
SYNE2-220ENST00000555612 XGP55808 180 aa5.79□□□□□ -1.48
SYNE2-220ENST00000555612 A0A1B0GUV1 79 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 X6R8D5 127 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 ATG2AQ2TAZ0 1938 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 J3KT08 172 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 FAM19A3Q7Z5A8 133 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 SERP1Q9Y6X1 66 aa5.78□□□□□ -1.48
SYNE2-220ENST00000555612 MT-ATP8P03928 68 aa5.77□□□□□ -1.49
SYNE2-220ENST00000555612 NTM-AS1Q6ZSK4 140 aa5.77□□□□□ -1.49
SYNE2-220ENST00000555612 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
SYNE2-220ENST00000555612 USP9YO00507 2555 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-220ENST00000555612 EPG5Q9HCE0 2579 aa5.77□□□□□ -1.49
SYNE2-220ENST00000555612 CPAMD8Q8IZJ3 1885 aa5.77□□□□□ -1.49
SYNE2-220ENST00000555612 CSDC2Q9Y534 153 aaKnown RBP5.77□□□□□ -1.49
SYNE2-220ENST00000555612 F8WDY8 70 aa5.77□□□□□ -1.49
SYNE2-220ENST00000555612 LINC01546A6NGU7 62 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 Q8N814 137 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 A0A096LNJ9 63 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 SNURFQ9Y675 71 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 PRYO14603 147 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 Q6JHZ5 121 aa5.76□□□□□ -1.49
SYNE2-220ENST00000555612 FAM229AH3BQW9 127 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 TSPEAR-AS2P59090 65 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 WWC2-AS2Q96NR7 200 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 C16orf90A8MZG2 172 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 AMELXQ99217 191 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 ZNF292O60281 2723 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 A0A087WSZ3 146 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 C22orf24Q9Y442 160 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 TRANK1O15050 2925 aa5.75□□□□□ -1.49
SYNE2-220ENST00000555612 A0A087WYN8 130 aa5.74□□□□□ -1.49
SYNE2-220ENST00000555612 C11orf72Q8NBR9 251 aa5.74□□□□□ -1.49
SYNE2-220ENST00000555612 DEFB116Q30KQ4 102 aa5.74□□□□□ -1.49
SYNE2-220ENST00000555612 LINC00315P59091 139 aa5.74□□□□□ -1.49
SYNE2-220ENST00000555612 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
SYNE2-220ENST00000555612 ADAMTSL4-AS1Q5T5F5 129 aa5.74□□□□□ -1.49
SYNE2-220ENST00000555612 MTORP42345 2549 aa5.73□□□□□ -1.49
SYNE2-220ENST00000555612 A8MTW9 85 aa5.73□□□□□ -1.49
SYNE2-220ENST00000555612 SMCR5Q8TEV8 140 aa5.73□□□□□ -1.49
SYNE2-220ENST00000555612 POLQO75417 2590 aa5.73□□□□□ -1.49
SYNE2-220ENST00000555612 NBDYA0A0U1RRE5 68 aa5.72□□□□□ -1.49
SYNE2-220ENST00000555612 UQCRQO14949 82 aa5.72□□□□□ -1.49
SYNE2-220ENST00000555612 SPACA4Q8TDM5 124 aa5.72□□□□□ -1.49
SYNE2-220ENST00000555612 RTL8CO15255 209 aa5.72□□□□□ -1.49
SYNE2-220ENST00000555612 SPINK1P00995 79 aa5.71□□□□□ -1.49
SYNE2-220ENST00000555612 LINC01547P58512 204 aaPredicted RBP5.71□□□□□ -1.5
SYNE2-220ENST00000555612 TET2Q6N021 2002 aaPredicted RBP5.71□□□□□ -1.5
SYNE2-220ENST00000555612 LINC00208Q96KT6 92 aa5.7□□□□□ -1.5
SYNE2-220ENST00000555612 PKD1L2Q7Z442 2459 aa5.7□□□□□ -1.5
SYNE2-220ENST00000555612 KLK9Q2XQG4 91 aa5.7□□□□□ -1.5
SYNE2-220ENST00000555612 SERTAD4-AS1Q5TG53 156 aa5.7□□□□□ -1.5
SYNE2-220ENST00000555612 Q6Q795 121 aa5.7□□□□□ -1.5
SYNE2-220ENST00000555612 J3QL48 77 aa5.7□□□□□ -1.5
SYNE2-220ENST00000555612 LINC00575Q6W349 94 aa5.69□□□□□ -1.5
SYNE2-220ENST00000555612 LINC01561Q8N1V8 128 aa5.69□□□□□ -1.5
SYNE2-220ENST00000555612 AGRNO00468 2067 aa5.69□□□□□ -1.5
SYNE2-220ENST00000555612 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 LINC00588Q9Y4M8 146 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 A6NED7 52 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 MOBPQ13875 183 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 LINC00167Q96N53 147 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 Q8N3U1 123 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 SERP2Q8N6R1 65 aa5.68□□□□□ -1.5
SYNE2-220ENST00000555612 KIF25-AS1Q9Y6Z4 181 aa5.67□□□□□ -1.5
SYNE2-220ENST00000555612 ACANP16112 2415 aa5.67□□□□□ -1.5
SYNE2-220ENST00000555612 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms