RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	TPR	P12270	2363 aa	Known RBP	0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	SHPRH	Q149N8	1683 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	TRBV6-1	A0A0K0K1D8	114 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	PRH1	P02810	166 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	COX6A2	Q02221	97 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	ZNF720	Q7Z2F6	126 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	S100A16	Q96FQ6	103 aa	Known RBP	0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	CNFN	Q9BYD5	112 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	KNDC1	Q76NI1	1749 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	PAPPA2	Q9BXP8	1791 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	PIEZO1	Q92508	2521 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	ANK2	Q01484	3957 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	ANKRD36	A6QL64	1941 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	XRN1	Q8IZH2	1706 aa	Known RBP	0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	NHSL1	Q5SYE7	1610 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506		A0A0D9SFI3	127 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506		I3L2K1	104 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	CYB5A	P00167	134 aa		0.66	□□□□□ -2.3
KTN1-222	ENST00000555506	TULP4	Q9NRJ4	1543 aa		0.65	□□□□□ -2.31
KTN1-222	ENST00000555506	CCDC18	Q5T9S5	1454 aa		0.65	□□□□□ -2.31
KTN1-222	ENST00000555506	RABAC1	Q9UI14	185 aa		0.65	□□□□□ -2.31
KTN1-222	ENST00000555506	PTPRZ1	P23471	2315 aa	Predicted RBP	0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	TARBP1	Q13395	1621 aa	Known RBP	0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	CUX1	P39880	1505 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	NEXMIF	Q5QGS0	1516 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	ZNF292	O60281	2723 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	ARHGAP35	Q9NRY4	1499 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	UACA	Q9BZF9	1416 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506		H0Y9P7	68 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506		H3BQF6	201 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	S100A3	P33764	101 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	DEFB107A	Q8IZN7	70 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	CHD9	Q3L8U1	2897 aa		0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	SPTBN1	Q01082	2364 aa	Known RBP	0.64	□□□□□ -2.31
KTN1-222	ENST00000555506	CELSR2	Q9HCU4	2923 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	HMGN2	P05204	90 aa	Known RBP	0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	SMIM11A	P58511	58 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	PEA15	Q15121	130 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	ALKAL2	Q6UX46	152 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	SMR3A	Q99954	134 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	TP53AIP1	Q9HCN2	124 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	SPCS1	Q9Y6A9	102 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	CRYBG1	Q9Y4K1	1723 aa		0.63	□□□□□ -2.31
KTN1-222	ENST00000555506	TNC	P24821	2201 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	PAPPA	Q13219	1627 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	KIF14	Q15058	1648 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	LINC00959	A0A1B0GUT2	108 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	KRTAP2-3	P0C7H8	128 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	KRTAP2-4	Q9BYR9	128 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	KRTAP2-1	Q9BYU5	128 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	MAGI2	Q86UL8	1455 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506		A0A0G2JMZ2	1700 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	GVINP1	Q7Z2Y8	2422 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506	PIEZO2	Q9H5I5	2752 aa		0.62	□□□□□ -2.31
KTN1-222	ENST00000555506		D6R8Y8	96 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	LEPROTL1	O95214	131 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	MUSTN1	Q8IVN3	82 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	PRO0255	Q9UI72	69 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	C5	P01031	1676 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	MAP3K4	Q9Y6R4	1608 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	AKAP6	Q13023	2319 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	TRBV7-4	A0A0J9YYF1	115 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	SNRPF	P62306	86 aa	Known RBP	0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	NMS	Q5H8A3	153 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	C6orf201	Q7Z4U5	140 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	UBE2D4	Q9Y2X8	147 aa		0.61	□□□□□ -2.31
KTN1-222	ENST00000555506	PTPRQ	Q9UMZ3	2332 aa		0.6	□□□□□ -2.31
KTN1-222	ENST00000555506	TMEM131L	A2VDJ0	1609 aa		0.6	□□□□□ -2.31
KTN1-222	ENST00000555506		A0A1B0GU69	56 aa		0.6	□□□□□ -2.31
KTN1-222	ENST00000555506	WFDC2	Q14508	124 aa		0.6	□□□□□ -2.31
KTN1-222	ENST00000555506	DEFB123	Q8N688	67 aa		0.6	□□□□□ -2.31
KTN1-222	ENST00000555506	SAMD9	Q5K651	1589 aa		0.59	□□□□□ -2.31
KTN1-222	ENST00000555506	BIVM-ERCC5	R4GMW8	1640 aa		0.59	□□□□□ -2.31
KTN1-222	ENST00000555506	IGF2R	P11717	2491 aa		0.59	□□□□□ -2.32
KTN1-222	ENST00000555506	IQCF6	A8MYZ5	107 aa		0.59	□□□□□ -2.32
KTN1-222	ENST00000555506	GNGT1	P63211	74 aa		0.59	□□□□□ -2.32
KTN1-222	ENST00000555506	KRTAP21-1	Q3LI58	79 aa		0.59	□□□□□ -2.32
KTN1-222	ENST00000555506	LINC00643	Q86TS7	51 aa		0.59	□□□□□ -2.32
KTN1-222	ENST00000555506	SLIT1	O75093	1534 aa		0.59	□□□□□ -2.32
KTN1-222	ENST00000555506	ALK	Q9UM73	1620 aa		0.58	□□□□□ -2.32
KTN1-222	ENST00000555506	ERVK-7	P63135	1459 aa		0.58	□□□□□ -2.32
KTN1-222	ENST00000555506	PKDREJ	Q9NTG1	2253 aa		0.58	□□□□□ -2.32
KTN1-222	ENST00000555506	DIP2B	Q9P265	1576 aa		0.58	□□□□□ -2.32
KTN1-222	ENST00000555506	IGLC3	P0DOY3	106 aa		0.58	□□□□□ -2.32
KTN1-222	ENST00000555506		Q8IZM0	81 aa		0.58	□□□□□ -2.32
KTN1-222	ENST00000555506	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.58	□□□□□ -2.32
KTN1-222	ENST00000555506	PIGY	Q3MUY2	71 aa		0.57	□□□□□ -2.32
KTN1-222	ENST00000555506	CSMD3	Q7Z407	3707 aa		0.57	□□□□□ -2.32
KTN1-222	ENST00000555506	KMT2D	O14686	5537 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	USP24	Q9UPU5	2620 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	MYMX	A0A1B0GTQ4	84 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	ACYP1	P07311	99 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	IGLC2	P0DOY2	106 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	S100A13	Q99584	98 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	ST20	Q9HBF5	79 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	ATP7B	P35670	1465 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	SETBP1	Q9Y6X0	1596 aa		0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.56	□□□□□ -2.32
KTN1-222	ENST00000555506	ZFYVE26	Q68DK2	2539 aa		0.55	□□□□□ -2.32
KTN1-222	ENST00000555506	PKD1L3	Q7Z443	1732 aa		0.55	□□□□□ -2.32

Retrieved 100 of 20,778 RNA–protein pairs in 131 ms