RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CDKN2A-AS1Q9UH64 79 aa7.78□□□□□ -1.16
TRAPPC6B-205ENST00000555269 LINC00614P0C842 121 aa7.77□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
TRAPPC6B-205ENST00000555269 A0A096LNJ9 63 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 F8WDY8 70 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 C9orf116Q5BN46 136 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 CBLN2Q8IUK8 224 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 C7orf33Q8WU49 177 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 GEMIN7Q9H840 131 aaKnown RBP7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 TOMM7Q9P0U1 55 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PKHD1L1Q86WI1 4243 aa7.76□□□□□ -1.17
TRAPPC6B-205ENST00000555269 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
TRAPPC6B-205ENST00000555269 KRTAP29-1A8MX34 341 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC6B-205ENST00000555269 HERVK_113P63121 156 aa7.75□□□□□ -1.17
TRAPPC6B-205ENST00000555269 C6orf226Q5I0X4 101 aa7.75□□□□□ -1.17
TRAPPC6B-205ENST00000555269 Q6ZRP5 223 aa7.75□□□□□ -1.17
TRAPPC6B-205ENST00000555269 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
TRAPPC6B-205ENST00000555269 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC6B-205ENST00000555269 SEC11AP67812 179 aa7.74□□□□□ -1.17
TRAPPC6B-205ENST00000555269 GAGE2EQ4V326 116 aa7.74□□□□□ -1.17
TRAPPC6B-205ENST00000555269 LINC00469Q8N7U9 141 aa7.74□□□□□ -1.17
TRAPPC6B-205ENST00000555269 GAGE2DQ9UEU5 116 aa7.74□□□□□ -1.17
TRAPPC6B-205ENST00000555269 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
TRAPPC6B-205ENST00000555269 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
TRAPPC6B-205ENST00000555269 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PRSS2P07478 247 aa7.73□□□□□ -1.17
TRAPPC6B-205ENST00000555269 NDUFA6P56556 154 aa7.73□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PMVKQ15126 192 aa7.73□□□□□ -1.17
TRAPPC6B-205ENST00000555269 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
TRAPPC6B-205ENST00000555269 CKS1BP61024 79 aa7.72□□□□□ -1.17
TRAPPC6B-205ENST00000555269 PHF5AQ7RTV0 110 aaKnown RBP7.72□□□□□ -1.17
TRAPPC6B-205ENST00000555269 TRBV30A0A0K0K1B3 111 aa7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 HBDP02042 147 aa7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 RAB5BP61020 215 aa7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 PDZD11Q5EBL8 140 aa7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 Q8IZM0 81 aa7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 PACRGQ96M98 296 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC6B-205ENST00000555269 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
TRAPPC6B-205ENST00000555269 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
TRAPPC6B-205ENST00000555269 TRGC2P03986 189 aa7.7□□□□□ -1.18
TRAPPC6B-205ENST00000555269 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
TRAPPC6B-205ENST00000555269 NDUFC2-KCTD14E9PQ53 114 aa7.69□□□□□ -1.18
TRAPPC6B-205ENST00000555269 OXTP01178 125 aa7.69□□□□□ -1.18
TRAPPC6B-205ENST00000555269 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
TRAPPC6B-205ENST00000555269 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
TRAPPC6B-205ENST00000555269 FAM19A5Q7Z5A7 132 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC6B-205ENST00000555269 BAGE3Q86Y29 109 aa7.68□□□□□ -1.18
TRAPPC6B-205ENST00000555269 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
TRAPPC6B-205ENST00000555269 COX7B2Q8TF08 81 aa7.68□□□□□ -1.18
TRAPPC6B-205ENST00000555269 COLCA2A8K830 154 aa7.67□□□□□ -1.18
TRAPPC6B-205ENST00000555269 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
TRAPPC6B-205ENST00000555269 FAM19A2Q8N3H0 131 aa7.67□□□□□ -1.18
TRAPPC6B-205ENST00000555269 CHCHD1Q96BP2 118 aaKnown RBP7.67□□□□□ -1.18
TRAPPC6B-205ENST00000555269 F8VRH5 84 aa7.66□□□□□ -1.18
TRAPPC6B-205ENST00000555269 ATP5LO75964 103 aa7.66□□□□□ -1.18
TRAPPC6B-205ENST00000555269 SRSF9Q13242 221 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRAPPC6B-205ENST00000555269 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
TRAPPC6B-205ENST00000555269 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
TRAPPC6B-205ENST00000555269 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC6B-205ENST00000555269 C11orf86A6NJI1 115 aa7.64□□□□□ -1.19
TRAPPC6B-205ENST00000555269 H3BRM9 83 aa7.64□□□□□ -1.19
TRAPPC6B-205ENST00000555269 SCO1O75880 301 aa7.64□□□□□ -1.19
TRAPPC6B-205ENST00000555269 NUPR1O60356 82 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 CXCL5P42830 114 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 SERTAD4-AS1Q5TG53 156 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 CHTOPQ9Y3Y2 248 aaKnown RBP7.63□□□□□ -1.19
TRAPPC6B-205ENST00000555269 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
TRAPPC6B-205ENST00000555269 M0QXV9 152 aa7.62□□□□□ -1.19
TRAPPC6B-205ENST00000555269 HSBP1O75506 76 aa7.62□□□□□ -1.19
TRAPPC6B-205ENST00000555269 LINC00310P59036 64 aa7.62□□□□□ -1.19
TRAPPC6B-205ENST00000555269 TMEM170BQ5T4T1 132 aa7.62□□□□□ -1.19
TRAPPC6B-205ENST00000555269 SERF1AO75920 110 aa7.61□□□□□ -1.19
TRAPPC6B-205ENST00000555269 C22orf24Q9Y442 160 aa7.61□□□□□ -1.19
TRAPPC6B-205ENST00000555269 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC6B-205ENST00000555269 TRAV12-1A0A0B4J245 112 aa7.59□□□□□ -1.19
TRAPPC6B-205ENST00000555269 PFN2P35080 140 aa7.59□□□□□ -1.19
TRAPPC6B-205ENST00000555269 UBE2BP63146 152 aa7.59□□□□□ -1.19
TRAPPC6B-205ENST00000555269 LINC01600Q96MT4 127 aa7.59□□□□□ -1.19
TRAPPC6B-205ENST00000555269 H0Y8G0 127 aa7.58□□□□□ -1.2
TRAPPC6B-205ENST00000555269 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
TRAPPC6B-205ENST00000555269 TMEM223A0PJW6 202 aa7.57□□□□□ -1.2
TRAPPC6B-205ENST00000555269 FABP4P15090 132 aa7.57□□□□□ -1.2
TRAPPC6B-205ENST00000555269 ODF1Q14990 250 aa7.57□□□□□ -1.2
TRAPPC6B-205ENST00000555269 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
TRAPPC6B-205ENST00000555269 TNXBP22105 4242 aa7.56□□□□□ -1.2
TRAPPC6B-205ENST00000555269 RPL37AP8A6NKH3 93 aa7.55□□□□□ -1.2
TRAPPC6B-205ENST00000555269 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
TRAPPC6B-205ENST00000555269 LBHQ53QV2 105 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC6B-205ENST00000555269 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
TRAPPC6B-205ENST00000555269 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
TRAPPC6B-205ENST00000555269 ERG28Q9UKR5 140 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms