RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SCGB1C2P0DMR2 95 aa6.09□□□□□ -1.44
TDP1-210ENST00000554976 LELP1Q5T871 98 aa6.09□□□□□ -1.44
TDP1-210ENST00000554976 CHCHD5Q9BSY4 110 aa6.09□□□□□ -1.44
TDP1-210ENST00000554976 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.44
TDP1-210ENST00000554976 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
TDP1-210ENST00000554976 NDUFA1O15239 70 aa6.08□□□□□ -1.44
TDP1-210ENST00000554976 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
TDP1-210ENST00000554976 LGALS3P17931 250 aaKnown RBP6.08□□□□□ -1.44
TDP1-210ENST00000554976 LYPD5Q6UWN5 251 aa6.08□□□□□ -1.44
TDP1-210ENST00000554976 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
TDP1-210ENST00000554976 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
TDP1-210ENST00000554976 C15orf53Q8NAA6 179 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 A0A087WZ39 114 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 TRBV7-7A0A0K0K1E9 115 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 TIMM17BO60830 172 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 TCL1BO95988 128 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 NANOS2P60321 138 aaKnown RBP6.07□□□□□ -1.44
TDP1-210ENST00000554976 PRR34Q9NV39 138 aa6.07□□□□□ -1.44
TDP1-210ENST00000554976 LOC107984156A0A0G2JMH3 177 aa6.06□□□□□ -1.44
TDP1-210ENST00000554976 ADAMTSL4-AS1Q5T5F5 129 aa6.06□□□□□ -1.44
TDP1-210ENST00000554976 ARL17AQ8IVW1 177 aa6.06□□□□□ -1.44
TDP1-210ENST00000554976 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
TDP1-210ENST00000554976 C3orf22Q8N5N4 141 aa6.06□□□□□ -1.44
TDP1-210ENST00000554976 RPL13AP40429 203 aaKnown RBP6.05□□□□□ -1.44
TDP1-210ENST00000554976 C9orf153Q5TBE3 101 aa6.05□□□□□ -1.44
TDP1-210ENST00000554976 NDUFA12Q9UI09 145 aa6.05□□□□□ -1.44
TDP1-210ENST00000554976 UQCRQO14949 82 aa6.05□□□□□ -1.44
TDP1-210ENST00000554976 SLC25A20O43772 301 aa6.05□□□□□ -1.44
TDP1-210ENST00000554976 C11orf45Q8TAV5 145 aa6.05□□□□□ -1.44
TDP1-210ENST00000554976 CSMD3Q7Z407 3707 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 HTN3P15516 51 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 LYSTQ99698 3801 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 COL6A5A8TX70 2615 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
TDP1-210ENST00000554976 KRTAP26-1Q6PEX3 210 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 ENHOQ6UWT2 76 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
TDP1-210ENST00000554976 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 MIAQ16674 131 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 ESRGQ1W209 222 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 LINC00269Q8N2A0 174 aa6.03□□□□□ -1.44
TDP1-210ENST00000554976 DEFB131BA0A096LNP1 70 aa6.02□□□□□ -1.45
TDP1-210ENST00000554976 CFC1BP0CG36 223 aa6.02□□□□□ -1.45
TDP1-210ENST00000554976 CFC1P0CG37 223 aa6.02□□□□□ -1.45
TDP1-210ENST00000554976 REG3AQ06141 175 aa6.02□□□□□ -1.45
TDP1-210ENST00000554976 MUSTN1Q8IVN3 82 aa6.02□□□□□ -1.45
TDP1-210ENST00000554976 COX7B2Q8TF08 81 aa6.02□□□□□ -1.45
TDP1-210ENST00000554976 KIAA0087Q14695 138 aa6.01□□□□□ -1.45
TDP1-210ENST00000554976 WFDC10BQ8IUB3 73 aa6.01□□□□□ -1.45
TDP1-210ENST00000554976 Q9H8V8 135 aa6.01□□□□□ -1.45
TDP1-210ENST00000554976 CD164L2Q6UWJ8 174 aa6.01□□□□□ -1.45
TDP1-210ENST00000554976 SS18Q15532 418 aa6.01□□□□□ -1.45
TDP1-210ENST00000554976 CLPSL2Q6UWE3 100 aa6.01□□□□□ -1.45
TDP1-210ENST00000554976 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
TDP1-210ENST00000554976 NBEAL1Q6ZS30 2694 aa6□□□□□ -1.45
TDP1-210ENST00000554976 TRAV10A0A0B4J240 114 aa6□□□□□ -1.45
TDP1-210ENST00000554976 SOSTDC1Q6X4U4 206 aa6□□□□□ -1.45
TDP1-210ENST00000554976 CHCHD10Q8WYQ3 142 aaPredicted RBP6□□□□□ -1.45
TDP1-210ENST00000554976 B9D2Q9BPU9 175 aa6□□□□□ -1.45
TDP1-210ENST00000554976 A0A0B4J2C4 111 aa6□□□□□ -1.45
TDP1-210ENST00000554976 IGKV3OR2-268A0A0C4DH90 116 aa6□□□□□ -1.45
TDP1-210ENST00000554976 CRYGAP11844 174 aa6□□□□□ -1.45
TDP1-210ENST00000554976 SRSF9Q13242 221 aaKnown RBP eCLIP6□□□□□ -1.45
TDP1-210ENST00000554976 Q8IZM0 81 aa6□□□□□ -1.45
TDP1-210ENST00000554976 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
TDP1-210ENST00000554976 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
TDP1-210ENST00000554976 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
TDP1-210ENST00000554976 SFTA2Q6UW10 78 aa5.99□□□□□ -1.45
TDP1-210ENST00000554976 XCL1P47992 114 aa5.99□□□□□ -1.45
TDP1-210ENST00000554976 C5orf38Q86SI9 138 aa5.99□□□□□ -1.45
TDP1-210ENST00000554976 DEFB121Q5J5C9 76 aa5.99□□□□□ -1.45
TDP1-210ENST00000554976 UBE2WQ96B02 151 aa5.98□□□□□ -1.45
TDP1-210ENST00000554976 LINC01556Q5JQF7 62 aa5.98□□□□□ -1.45
TDP1-210ENST00000554976 GAGE2AQ6NT46 116 aa5.98□□□□□ -1.45
TDP1-210ENST00000554976 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
TDP1-210ENST00000554976 KLK5Q9Y337 293 aaPredicted RBP5.98□□□□□ -1.45
TDP1-210ENST00000554976 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
TDP1-210ENST00000554976 COX7CP15954 63 aa5.97□□□□□ -1.45
TDP1-210ENST00000554976 Q5XG85 94 aa5.97□□□□□ -1.45
TDP1-210ENST00000554976 TEX49A0A1B0GTD5 131 aa5.97□□□□□ -1.45
TDP1-210ENST00000554976 TMEM258P61165 79 aa5.97□□□□□ -1.45
TDP1-210ENST00000554976 DAND5Q8N907 189 aa5.97□□□□□ -1.45
TDP1-210ENST00000554976 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 IGHV3-33P01772 117 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 MALP21145 153 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 DPH3Q96FX2 82 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 UPK3BQ9BT76 320 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 KLK12Q9UKR0 248 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 LINC00588Q9Y4M8 146 aa5.96□□□□□ -1.45
TDP1-210ENST00000554976 TRBV10-2A0A0K0K1G8 114 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 LINC01620Q4KN68 170 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 PRO1854Q9UHT4 67 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 PRO0628Q9UI54 55 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms