RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 ALKQ9UM73 1620 aa1.84□□□□□ -2.11
FCF1-207ENST00000554973 IQCF6A8MYZ5 107 aa1.84□□□□□ -2.11
FCF1-207ENST00000554973 PAPPA2Q9BXP8 1791 aa1.84□□□□□ -2.12
FCF1-207ENST00000554973 ERCC6L2Q5T890 1561 aa1.84□□□□□ -2.12
FCF1-207ENST00000554973 CFAP74Q9C0B2 1584 aa1.84□□□□□ -2.12
FCF1-207ENST00000554973 MYMXA0A1B0GTQ4 84 aa1.83□□□□□ -2.12
FCF1-207ENST00000554973 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
FCF1-207ENST00000554973 NHSL1Q5SYE7 1610 aa1.83□□□□□ -2.12
FCF1-207ENST00000554973 S100A3P33764 101 aa1.82□□□□□ -2.12
FCF1-207ENST00000554973 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
FCF1-207ENST00000554973 LRRIQ1Q96JM4 1722 aa1.82□□□□□ -2.12
FCF1-207ENST00000554973 ZNF462Q96JM2 2506 aa1.81□□□□□ -2.12
FCF1-207ENST00000554973 PLGLAQ15195 96 aa1.81□□□□□ -2.12
FCF1-207ENST00000554973 PTPN23Q9H3S7 1636 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 OTOGLQ3ZCN5 2332 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 KIF20BQ96Q89 1820 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 SPINK7P58062 85 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 GNGT1P63211 74 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 BVES-AS1Q5T3Y7 98 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 GOLGA4Q13439 2230 aaKnown RBP1.8□□□□□ -2.12
FCF1-207ENST00000554973 ABCC1P33527 1531 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 LAMC1P11047 1609 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 A0A0G2JMZ2 1700 aa1.8□□□□□ -2.12
FCF1-207ENST00000554973 C6orf201Q7Z4U5 140 aa1.79□□□□□ -2.12
FCF1-207ENST00000554973 ANKRD36A6QL64 1941 aa1.78□□□□□ -2.12
FCF1-207ENST00000554973 ANKRD17O75179 2603 aaKnown RBP1.78□□□□□ -2.12
FCF1-207ENST00000554973 SAMD9Q5K651 1589 aa1.77□□□□□ -2.13
FCF1-207ENST00000554973 ATP7BP35670 1465 aa1.77□□□□□ -2.13
FCF1-207ENST00000554973 IGLC2P0DOY2 106 aa1.77□□□□□ -2.13
FCF1-207ENST00000554973 IGLC3P0DOY3 106 aa1.77□□□□□ -2.13
FCF1-207ENST00000554973 FAM103A1Q9BTL3 118 aaKnown RBP1.77□□□□□ -2.13
FCF1-207ENST00000554973 PKD1L3Q7Z443 1732 aa1.77□□□□□ -2.13
FCF1-207ENST00000554973 CCDC88BA6NC98 1476 aa1.76□□□□□ -2.13
FCF1-207ENST00000554973 ANKARQ7Z5J8 1434 aa1.76□□□□□ -2.13
FCF1-207ENST00000554973 CEBPZOSA8MTT3 80 aa1.76□□□□□ -2.13
FCF1-207ENST00000554973 H3BUT2 72 aa1.76□□□□□ -2.13
FCF1-207ENST00000554973 ABCA8O94911 1581 aa1.76□□□□□ -2.13
FCF1-207ENST00000554973 NCOA2Q15596 1464 aa1.75□□□□□ -2.13
FCF1-207ENST00000554973 TULP4Q9NRJ4 1543 aa1.75□□□□□ -2.13
FCF1-207ENST00000554973 RGPD8O14715 1765 aaPredicted RBP1.75□□□□□ -2.13
FCF1-207ENST00000554973 RGPD5Q99666 1765 aa1.75□□□□□ -2.13
FCF1-207ENST00000554973 A0A1B0GU69 56 aa1.74□□□□□ -2.13
FCF1-207ENST00000554973 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
FCF1-207ENST00000554973 PPRC1Q5VV67 1664 aaKnown RBP1.74□□□□□ -2.13
FCF1-207ENST00000554973 CACNA1HO95180 2353 aa1.73□□□□□ -2.13
FCF1-207ENST00000554973 A0A0D9SFI3 127 aa1.73□□□□□ -2.13
FCF1-207ENST00000554973 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
FCF1-207ENST00000554973 LTN1O94822 1766 aa1.72□□□□□ -2.13
FCF1-207ENST00000554973 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
FCF1-207ENST00000554973 KIAA0556O60303 1618 aa1.7□□□□□ -2.14
FCF1-207ENST00000554973 LINC00959A0A1B0GUT2 108 aa1.7□□□□□ -2.14
FCF1-207ENST00000554973 A0A1B0GUT8 65 aa1.7□□□□□ -2.14
FCF1-207ENST00000554973 COX6A2Q02221 97 aa1.7□□□□□ -2.14
FCF1-207ENST00000554973 C18orf32Q8TCD1 76 aa1.7□□□□□ -2.14
FCF1-207ENST00000554973 PAPPAQ13219 1627 aa1.69□□□□□ -2.14
FCF1-207ENST00000554973 DEFB121Q5J5C9 76 aa1.69□□□□□ -2.14
FCF1-207ENST00000554973 TP53AIP1Q9HCN2 124 aa1.69□□□□□ -2.14
FCF1-207ENST00000554973 RGPD2P0DJD1 1756 aa1.69□□□□□ -2.14
FCF1-207ENST00000554973 NKTRP30414 1462 aaKnown RBP1.69□□□□□ -2.14
FCF1-207ENST00000554973 PLCE1Q9P212 2302 aa1.68□□□□□ -2.14
FCF1-207ENST00000554973 I3L2K1 104 aa1.68□□□□□ -2.14
FCF1-207ENST00000554973 SMCO4Q9NRQ5 59 aa1.68□□□□□ -2.14
FCF1-207ENST00000554973 LRRC37AA6NMS7 1700 aa1.67□□□□□ -2.14
FCF1-207ENST00000554973 DNMBPQ6XZF7 1577 aa1.67□□□□□ -2.14
FCF1-207ENST00000554973 SETBP1Q9Y6X0 1596 aa1.67□□□□□ -2.14
FCF1-207ENST00000554973 URB2Q14146 1524 aaKnown RBP1.66□□□□□ -2.14
FCF1-207ENST00000554973 PIK3C2BO00750 1634 aa1.66□□□□□ -2.14
FCF1-207ENST00000554973 URB1O60287 2271 aaKnown RBP1.66□□□□□ -2.14
FCF1-207ENST00000554973 RGPD1P0DJD0 1748 aa1.66□□□□□ -2.14
FCF1-207ENST00000554973 CCDC141Q6ZP82 1450 aa1.65□□□□□ -2.15
FCF1-207ENST00000554973 ATP5EP2Q5VTU8 51 aa1.65□□□□□ -2.15
FCF1-207ENST00000554973 MYO5CQ9NQX4 1742 aa1.65□□□□□ -2.15
FCF1-207ENST00000554973 CCDC180Q9P1Z9 1646 aa1.65□□□□□ -2.15
FCF1-207ENST00000554973 DOPEY2Q9Y3R5 2298 aa1.65□□□□□ -2.15
FCF1-207ENST00000554973 SLIT1O75093 1534 aa1.65□□□□□ -2.15
FCF1-207ENST00000554973 CFDP00746 253 aaPredicted RBP1.64□□□□□ -2.15
FCF1-207ENST00000554973 PRO0255Q9UI72 69 aa1.64□□□□□ -2.15
FCF1-207ENST00000554973 IQGAP3Q86VI3 1631 aa1.64□□□□□ -2.15
FCF1-207ENST00000554973 UGGT2Q9NYU1 1516 aa1.64□□□□□ -2.15
FCF1-207ENST00000554973 CEP170BQ9Y4F5 1589 aaPredicted RBP1.64□□□□□ -2.15
FCF1-207ENST00000554973 LRRC7Q96NW7 1537 aa1.63□□□□□ -2.15
FCF1-207ENST00000554973 PIGYQ3MUY2 71 aa1.63□□□□□ -2.15
FCF1-207ENST00000554973 C2CD3Q4AC94 2353 aa1.62□□□□□ -2.15
FCF1-207ENST00000554973 DEFB112Q30KQ8 113 aa1.62□□□□□ -2.15
FCF1-207ENST00000554973 PDCD5O14737 125 aa1.61□□□□□ -2.15
FCF1-207ENST00000554973 DEFB123Q8N688 67 aa1.61□□□□□ -2.15
FCF1-207ENST00000554973 SCN11AQ9UI33 1791 aa1.61□□□□□ -2.15
FCF1-207ENST00000554973 QSER1Q2KHR3 1735 aa1.6□□□□□ -2.15
FCF1-207ENST00000554973 TTC28Q96AY4 2481 aa1.6□□□□□ -2.15
FCF1-207ENST00000554973 PRB3Q04118 309 aaPredicted RBP1.6□□□□□ -2.15
FCF1-207ENST00000554973 SPTBN2O15020 2390 aa1.6□□□□□ -2.15
FCF1-207ENST00000554973 MAGI3Q5TCQ9 1506 aa1.6□□□□□ -2.15
FCF1-207ENST00000554973 SMIM13P0DJ93 91 aa1.59□□□□□ -2.15
FCF1-207ENST00000554973 DEFA5Q01523 94 aa1.59□□□□□ -2.15
FCF1-207ENST00000554973 NDUFB1O75438 58 aa1.58□□□□□ -2.16
FCF1-207ENST00000554973 USP32Q8NFA0 1604 aa1.58□□□□□ -2.16
FCF1-207ENST00000554973 ZNF831Q5JPB2 1677 aa1.58□□□□□ -2.16
FCF1-207ENST00000554973 Q8IZM0 81 aa1.57□□□□□ -2.16
FCF1-207ENST00000554973 BIVM-ERCC5R4GMW8 1640 aa1.57□□□□□ -2.16
FCF1-207ENST00000554973 ARFGEF2Q9Y6D5 1785 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms