RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 MBD5Q9P267 1494 aa-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 BTAF1O14981 1849 aa-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 DNHD1Q96M86 4753 aa-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 KIAA0556O60303 1618 aa-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 PSME4Q14997 1843 aa-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 FAM223BA6NKX1 122 aa-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 Q0VG73 95 aa-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 H1FX-AS1Q4G0G2 97 aa-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 CELSR3Q9NYQ7 3312 aa-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 KTN1Q86UP2 1357 aaKnown RBP-1.21□□□□□ -2.6
PCNX1-208ENST00000554707 ABCA13Q86UQ4 5058 aa-1.22□□□□□ -2.6
PCNX1-208ENST00000554707 SMG6Q86US8 1419 aaKnown RBP-1.22□□□□□ -2.6
PCNX1-208ENST00000554707 SNAPC5O75971 98 aa-1.22□□□□□ -2.6
PCNX1-208ENST00000554707 MYOM1P52179 1685 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 C1orf167Q5SNV9 1468 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 FAM24AA6NFZ4 105 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 F6UZH7 168 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 DEFB112Q30KQ8 113 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 DPH3P1Q9H4G8 78 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 TET3O43151 1660 aa-1.23□□□□□ -2.61
PCNX1-208ENST00000554707 NIPBLQ6KC79 2804 aaeCLIP-1.24□□□□□ -2.61
PCNX1-208ENST00000554707 ARHGEF5Q12774 1597 aa-1.24□□□□□ -2.61
PCNX1-208ENST00000554707 PP6455Q8WZ26 134 aa-1.24□□□□□ -2.61
PCNX1-208ENST00000554707 C12orf57Q99622 126 aa-1.24□□□□□ -2.61
PCNX1-208ENST00000554707 MYO18BQ8IUG5 2567 aa-1.24□□□□□ -2.61
PCNX1-208ENST00000554707 TNRC18O15417 2968 aaPredicted RBP-1.24□□□□□ -2.61
PCNX1-208ENST00000554707 MUC17Q685J3 4493 aa-1.25□□□□□ -2.61
PCNX1-208ENST00000554707 ZFHX3Q15911 3703 aa-1.25□□□□□ -2.61
PCNX1-208ENST00000554707 A0A1B0GU69 56 aa-1.25□□□□□ -2.61
PCNX1-208ENST00000554707 I3L3M4 83 aa-1.25□□□□□ -2.61
PCNX1-208ENST00000554707 COX6CP09669 75 aa-1.25□□□□□ -2.61
PCNX1-208ENST00000554707 FMN2Q9NZ56 1722 aa-1.26□□□□□ -2.61
PCNX1-208ENST00000554707 PRO1854Q9UHT4 67 aa-1.26□□□□□ -2.61
PCNX1-208ENST00000554707 NLRP1Q9C000 1473 aa-1.26□□□□□ -2.61
PCNX1-208ENST00000554707 DNAH6Q9C0G6 4158 aa-1.26□□□□□ -2.61
PCNX1-208ENST00000554707 ATP5EP56381 51 aaPredicted RBP-1.27□□□□□ -2.61
PCNX1-208ENST00000554707 C9orf62Q8N4C0 152 aa-1.27□□□□□ -2.61
PCNX1-208ENST00000554707 EHBP1L1Q8N3D4 1523 aa-1.27□□□□□ -2.61
PCNX1-208ENST00000554707 PHLPP1O60346 1717 aa-1.27□□□□□ -2.61
PCNX1-208ENST00000554707 ADGRL2O95490 1459 aa-1.28□□□□□ -2.61
PCNX1-208ENST00000554707 SCAPERQ9BY12 1400 aa-1.28□□□□□ -2.61
PCNX1-208ENST00000554707 K7EP13 123 aa-1.28□□□□□ -2.61
PCNX1-208ENST00000554707 UBE2D3P61077 147 aa-1.28□□□□□ -2.61
PCNX1-208ENST00000554707 UBE2D2P62837 147 aa-1.28□□□□□ -2.61
PCNX1-208ENST00000554707 PRRC2CQ9Y520 2896 aaKnown RBP-1.28□□□□□ -2.61
PCNX1-208ENST00000554707 WDR87Q6ZQQ6 2873 aa-1.29□□□□□ -2.62
PCNX1-208ENST00000554707 ROBO1Q9Y6N7 1651 aa-1.29□□□□□ -2.62
PCNX1-208ENST00000554707 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.29□□□□□ -2.62
PCNX1-208ENST00000554707 A0A087WVE0 104 aa-1.29□□□□□ -2.62
PCNX1-208ENST00000554707 NAP1L6A6NFF2 107 aa-1.29□□□□□ -2.62
PCNX1-208ENST00000554707 SNCAP37840 140 aa-1.29□□□□□ -2.62
PCNX1-208ENST00000554707 CCDC141Q6ZP82 1450 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 PLEKHH2Q8IVE3 1493 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 COL12A1Q99715 3063 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 ROCK2O75116 1388 aaKnown RBP-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 CRYM-AS1A6NIL9 109 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 SAA2P0DJI9 122 aaPredicted RBP-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 SVBPQ8N300 66 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 LINC00846Q9NV44 126 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 DNAH3Q8TD57 4116 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 PKHD1L1Q86WI1 4243 aa-1.3□□□□□ -2.62
PCNX1-208ENST00000554707 HEPN1Q6WQI6 88 aa-1.31□□□□□ -2.62
PCNX1-208ENST00000554707 C6orf201Q7Z4U5 140 aa-1.31□□□□□ -2.62
PCNX1-208ENST00000554707 SPTBN4Q9H254 2564 aa-1.31□□□□□ -2.62
PCNX1-208ENST00000554707 A2ML1A8K2U0 1454 aa-1.31□□□□□ -2.62
PCNX1-208ENST00000554707 LAMA3Q16787 3333 aa-1.32□□□□□ -2.62
PCNX1-208ENST00000554707 DNAH2Q9P225 4427 aa-1.32□□□□□ -2.62
PCNX1-208ENST00000554707 HSD52Q0P140 79 aa-1.32□□□□□ -2.62
PCNX1-208ENST00000554707 FOCADQ5VW36 1801 aa-1.32□□□□□ -2.62
PCNX1-208ENST00000554707 NKTRP30414 1462 aaKnown RBP-1.32□□□□□ -2.62
PCNX1-208ENST00000554707 TACC2O95359 2948 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 C7orf77A4D0Y5 90 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 C1orf54Q8WWF1 131 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 VAMP8Q9BV40 100 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 PLECQ15149 4684 aaKnown RBP-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 MYH7P12883 1935 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 FAT3Q8TDW7 4589 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 SHROOM2Q13796 1616 aa-1.33□□□□□ -2.62
PCNX1-208ENST00000554707 AKAP13Q12802 2813 aa-1.34□□□□□ -2.62
PCNX1-208ENST00000554707 A0A0G2JMZ2 1700 aa-1.34□□□□□ -2.62
PCNX1-208ENST00000554707 TRAV30A0A087WSZ9 112 aa-1.34□□□□□ -2.62
PCNX1-208ENST00000554707 H0YGG7 62 aa-1.34□□□□□ -2.62
PCNX1-208ENST00000554707 S100A12P80511 92 aa-1.34□□□□□ -2.62
PCNX1-208ENST00000554707 DEFB107AQ8IZN7 70 aa-1.34□□□□□ -2.62
PCNX1-208ENST00000554707 XRN1Q8IZH2 1706 aaKnown RBP-1.35□□□□□ -2.62
PCNX1-208ENST00000554707 GNGT1P63211 74 aa-1.35□□□□□ -2.63
PCNX1-208ENST00000554707 SCN7AQ01118 1682 aa-1.35□□□□□ -2.63
PCNX1-208ENST00000554707 COL6A5A8TX70 2615 aa-1.36□□□□□ -2.63
PCNX1-208ENST00000554707 H3BQF6 201 aa-1.36□□□□□ -2.63
PCNX1-208ENST00000554707 LELP1Q5T871 98 aa-1.36□□□□□ -2.63
PCNX1-208ENST00000554707 MRPL34Q9BQ48 92 aaKnown RBP-1.36□□□□□ -2.63
PCNX1-208ENST00000554707 QRICH2Q9H0J4 1663 aa-1.36□□□□□ -2.63
PCNX1-208ENST00000554707 PAPPA2Q9BXP8 1791 aa-1.36□□□□□ -2.63
PCNX1-208ENST00000554707 LAMA1P25391 3075 aa-1.37□□□□□ -2.63
PCNX1-208ENST00000554707 HMGN1P05114 100 aa-1.37□□□□□ -2.63
PCNX1-208ENST00000554707 ASIPP42127 132 aa-1.37□□□□□ -2.63
PCNX1-208ENST00000554707 IER3IP1Q9Y5U9 82 aa-1.37□□□□□ -2.63
PCNX1-208ENST00000554707 CUBNO60494 3623 aa-1.37□□□□□ -2.63
PCNX1-208ENST00000554707 A0A0G2JND7 137 aa-1.38□□□□□ -2.63
PCNX1-208ENST00000554707 TMEM262E9PQX1 116 aa-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms