RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TRAV4A0A0B4J268 109 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 LCE6AA0A183 80 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
VPS33B-203ENST00000554264 INSP01308 110 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 EDN2P20800 178 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 DAZ2Q13117 558 aaKnown RBP4.22□□□□□ -1.73
VPS33B-203ENST00000554264 SPINK13Q1W4C9 94 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 TMEM95Q3KNT9 176 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 DAZ4Q86SG3 579 aaKnown RBP4.22□□□□□ -1.73
VPS33B-203ENST00000554264 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 JPT2Q9H910 190 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 DAZ3Q9NR90 486 aaKnown RBP4.22□□□□□ -1.73
VPS33B-203ENST00000554264 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
VPS33B-203ENST00000554264 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 TRAV25A0A0B4J276 109 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 H7C2G1 150 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 RS1O15537 224 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 FAM110AQ9BQ89 295 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 CHCHD7Q9BUK0 85 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 LINC00527Q9UJ94 153 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 COL7A1Q02388 2944 aa4.21□□□□□ -1.74
VPS33B-203ENST00000554264 IGKV3-7A0A075B6H7 116 aa4.2□□□□□ -1.74
VPS33B-203ENST00000554264 H0YGX0 51 aa4.2□□□□□ -1.74
VPS33B-203ENST00000554264 BLCAPP62952 87 aa4.2□□□□□ -1.74
VPS33B-203ENST00000554264 SDIM1Q6ZPB5 146 aa4.2□□□□□ -1.74
VPS33B-203ENST00000554264 LINC00308Q8TCZ7 52 aa4.2□□□□□ -1.74
VPS33B-203ENST00000554264 DNAH9Q9NYC9 4486 aa4.2□□□□□ -1.74
VPS33B-203ENST00000554264 IGHV3-64A0A075B6Q5 118 aa4.19□□□□□ -1.74
VPS33B-203ENST00000554264 TRAV12-2A0A075B6T6 113 aa4.19□□□□□ -1.74
VPS33B-203ENST00000554264 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
VPS33B-203ENST00000554264 DEFB1P60022 68 aa4.19□□□□□ -1.74
VPS33B-203ENST00000554264 RPL36AP83881 106 aaKnown RBP4.19□□□□□ -1.74
VPS33B-203ENST00000554264 OPRPNQ99935 248 aaPredicted RBP4.19□□□□□ -1.74
VPS33B-203ENST00000554264 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
VPS33B-203ENST00000554264 EPPK1P58107 5090 aaKnown RBP4.19□□□□□ -1.74
VPS33B-203ENST00000554264 TRAV8-3A0A0A6YYJ7 113 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 ATOX1O00244 68 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 UQCRQO14949 82 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 CRPP02741 224 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 RPL28P46779 137 aaKnown RBP4.18□□□□□ -1.74
VPS33B-203ENST00000554264 SYNJ2BPP57105 145 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 C11orf72Q8NBR9 251 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 RYR2Q92736 4967 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 DNAH3Q8TD57 4116 aa4.18□□□□□ -1.74
VPS33B-203ENST00000554264 TENM2Q9NT68 2774 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 IGLV5-52A0A0A0MRZ9 124 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 A0A1B0GX51 115 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 DNAL4O96015 105 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 MEIG1Q5JSS6 88 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 ATP5EP2Q5VTU8 51 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 DYNLRB2Q8TF09 96 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 C4orf3Q8WVX3 66 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 ZNF625Q96I27 306 aaPredicted RBP4.17□□□□□ -1.74
VPS33B-203ENST00000554264 LINC01587Q99440 93 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 Q9H8V8 135 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 CDKN2A-AS1Q9UH64 79 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 SS18L2Q9UHA2 77 aa4.17□□□□□ -1.74
VPS33B-203ENST00000554264 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 H3BQ85 93 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 K7EQD1 137 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 UBE2L6O14933 153 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 DEFB131AP59861 70 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 C9orf66Q5T8R8 295 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 C10orf99Q6UWK7 81 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 CLEC2BQ92478 149 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 LINC00526Q96FQ7 95 aa4.16□□□□□ -1.74
VPS33B-203ENST00000554264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
VPS33B-203ENST00000554264 IGHV3OR16-12A0A075B7B8 117 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
VPS33B-203ENST00000554264 RBMY1BA6NDE4 496 aaKnown RBP4.15□□□□□ -1.75
VPS33B-203ENST00000554264 RBMY1EA6NEQ0 496 aaKnown RBP4.15□□□□□ -1.75
VPS33B-203ENST00000554264 IBA57-AS1B1ANH7 110 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 RBMY1DP0C7P1 496 aaKnown RBP4.15□□□□□ -1.75
VPS33B-203ENST00000554264 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 RBMY1A1P0DJD3 496 aaKnown RBP4.15□□□□□ -1.75
VPS33B-203ENST00000554264 RBMY1CP0DJD4 496 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 C5orf38Q86SI9 138 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 C3orf22Q8N5N4 141 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 TMEM243Q9BU79 118 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 CDC42SE2Q9NRR3 84 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 NACAE9PAV3 2078 aa4.15□□□□□ -1.75
VPS33B-203ENST00000554264 FAM236AA0A1B0GUQ0 79 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 FAM236BA0A1B0GV22 79 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 CCL24O00175 119 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
VPS33B-203ENST00000554264 RBMY1FQ15415 496 aaKnown RBP4.14□□□□□ -1.75
VPS33B-203ENST00000554264 C9orf153Q5TBE3 101 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 Q6JHZ5 121 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 STHQ8IWL8 128 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms