RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 LINC01549A6NIU2 74 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 SNAPINO95295 136 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 PRSS2P07478 247 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 HERVK_113P63121 156 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 FA2HQ7L5A8 372 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 SVBPQ8N300 66 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
TUBB3-204ENST00000554116 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 TOMM7Q9P0U1 55 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 TRAPPC1Q9Y5R8 145 aa7.04□□□□□ -1.28
TUBB3-204ENST00000554116 C6orf226Q5I0X4 101 aa7.03□□□□□ -1.28
TUBB3-204ENST00000554116 C2orf82Q6UX34 121 aa7.03□□□□□ -1.28
TUBB3-204ENST00000554116 PACRGQ96M98 296 aaPredicted RBP7.03□□□□□ -1.28
TUBB3-204ENST00000554116 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
TUBB3-204ENST00000554116 PSORS1C2Q9UIG4 136 aa7.03□□□□□ -1.28
TUBB3-204ENST00000554116 TRBV30A0A0K0K1B3 111 aa7.02□□□□□ -1.29
TUBB3-204ENST00000554116 GAGE2EQ4V326 116 aa7.02□□□□□ -1.29
TUBB3-204ENST00000554116 GAGE2DQ9UEU5 116 aa7.02□□□□□ -1.29
TUBB3-204ENST00000554116 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
TUBB3-204ENST00000554116 LINC00614P0C842 121 aa7.01□□□□□ -1.29
TUBB3-204ENST00000554116 CKS1BP61024 79 aa7.01□□□□□ -1.29
TUBB3-204ENST00000554116 PHF5AQ7RTV0 110 aaKnown RBP7.01□□□□□ -1.29
TUBB3-204ENST00000554116 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
TUBB3-204ENST00000554116 Q8IZM0 81 aa7.01□□□□□ -1.29
TUBB3-204ENST00000554116 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
TUBB3-204ENST00000554116 NDUFC2-KCTD14E9PQ53 114 aa7□□□□□ -1.29
TUBB3-204ENST00000554116 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
TUBB3-204ENST00000554116 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
TUBB3-204ENST00000554116 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
TUBB3-204ENST00000554116 FAM168BA1KXE4 195 aa6.99□□□□□ -1.29
TUBB3-204ENST00000554116 PMVKQ15126 192 aa6.99□□□□□ -1.29
TUBB3-204ENST00000554116 C18orf32Q8TCD1 76 aa6.99□□□□□ -1.29
TUBB3-204ENST00000554116 URB1-AS1Q96HZ7 61 aa6.99□□□□□ -1.29
TUBB3-204ENST00000554116 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
TUBB3-204ENST00000554116 A0A096LNJ9 63 aa6.97□□□□□ -1.29
TUBB3-204ENST00000554116 SMIM1B2RUZ4 78 aa6.97□□□□□ -1.29
TUBB3-204ENST00000554116 F8VRH5 84 aa6.97□□□□□ -1.29
TUBB3-204ENST00000554116 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
TUBB3-204ENST00000554116 NDUFA6P56556 154 aa6.97□□□□□ -1.29
TUBB3-204ENST00000554116 RAB5BP61020 215 aa6.97□□□□□ -1.29
TUBB3-204ENST00000554116 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 HBDP02042 147 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 PDZD11Q5EBL8 140 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 C1orf137Q5JT78 98 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 C9orf129Q5T035 196 aaKnown RBP6.96□□□□□ -1.3
TUBB3-204ENST00000554116 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 YPEL4Q96NS1 127 aa6.96□□□□□ -1.3
TUBB3-204ENST00000554116 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
TUBB3-204ENST00000554116 CXCL5P42830 114 aa6.95□□□□□ -1.3
TUBB3-204ENST00000554116 COX7B2Q8TF08 81 aa6.95□□□□□ -1.3
TUBB3-204ENST00000554116 H3BRM9 83 aa6.94□□□□□ -1.3
TUBB3-204ENST00000554116 M0QXV9 152 aa6.94□□□□□ -1.3
TUBB3-204ENST00000554116 IGLV7-43P04211 117 aa6.94□□□□□ -1.3
TUBB3-204ENST00000554116 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
TUBB3-204ENST00000554116 ATP5LO75964 103 aa6.93□□□□□ -1.3
TUBB3-204ENST00000554116 IGLC3P0DOY3 106 aa6.93□□□□□ -1.3
TUBB3-204ENST00000554116 UBE2BP63146 152 aa6.93□□□□□ -1.3
TUBB3-204ENST00000554116 CBLN2Q8IUK8 224 aa6.93□□□□□ -1.3
TUBB3-204ENST00000554116 XAGE1AQ9HD64 81 aa6.93□□□□□ -1.3
TUBB3-204ENST00000554116 H0Y9J4 135 aa6.92□□□□□ -1.3
TUBB3-204ENST00000554116 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
TUBB3-204ENST00000554116 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
TUBB3-204ENST00000554116 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
TUBB3-204ENST00000554116 DIRC1Q969H9 104 aa6.91□□□□□ -1.3
TUBB3-204ENST00000554116 CHCHD1Q96BP2 118 aaKnown RBP6.91□□□□□ -1.3
TUBB3-204ENST00000554116 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
TUBB3-204ENST00000554116 PRR4Q16378 134 aa6.9□□□□□ -1.3
TUBB3-204ENST00000554116 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
TUBB3-204ENST00000554116 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
TUBB3-204ENST00000554116 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
TUBB3-204ENST00000554116 IGLV1-50A0A075B6I6 118 aa6.88□□□□□ -1.31
TUBB3-204ENST00000554116 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
TUBB3-204ENST00000554116 TRGC2P03986 189 aa6.88□□□□□ -1.31
TUBB3-204ENST00000554116 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
TUBB3-204ENST00000554116 HSBP1O75506 76 aa6.87□□□□□ -1.31
TUBB3-204ENST00000554116 PFN2P35080 140 aa6.87□□□□□ -1.31
TUBB3-204ENST00000554116 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
TUBB3-204ENST00000554116 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
TUBB3-204ENST00000554116 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
TUBB3-204ENST00000554116 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
TUBB3-204ENST00000554116 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
TUBB3-204ENST00000554116 NUPR1O60356 82 aa6.85□□□□□ -1.31
TUBB3-204ENST00000554116 ZNF625Q96I27 306 aaPredicted RBP6.85□□□□□ -1.31
TUBB3-204ENST00000554116 LINC00167Q96N53 147 aa6.84□□□□□ -1.31
TUBB3-204ENST00000554116 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
TUBB3-204ENST00000554116 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 GAGE10A6NGK3 116 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 COLCA2A8K830 154 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 ZNF861PO60384 105 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 COX17Q14061 63 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 NKAPP1Q8N9T2 125 aa6.83□□□□□ -1.32
TUBB3-204ENST00000554116 IGLV5-37A0A075B6J1 123 aa6.82□□□□□ -1.32
TUBB3-204ENST00000554116 H0Y8G0 127 aa6.82□□□□□ -1.32
TUBB3-204ENST00000554116 SERF1AO75920 110 aa6.82□□□□□ -1.32
TUBB3-204ENST00000554116 LEPROTL1O95214 131 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms