RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
PABPN1-203ENST00000553960 NTN5Q8WTR8 489 aaPredicted RBP7.23□□□□□ -1.25
PABPN1-203ENST00000553960 SNHG12Q9BXW3 62 aa7.23□□□□□ -1.25
PABPN1-203ENST00000553960 IGKV3OR2-268A0A0C4DH90 116 aa7.22□□□□□ -1.25
PABPN1-203ENST00000553960 TRBV30A0A0K0K1B3 111 aa7.22□□□□□ -1.25
PABPN1-203ENST00000553960 CLPSL2Q6UWE3 100 aa7.22□□□□□ -1.25
PABPN1-203ENST00000553960 Q6ZR54 194 aa7.22□□□□□ -1.25
PABPN1-203ENST00000553960 CEND1Q8N111 149 aa7.22□□□□□ -1.25
PABPN1-203ENST00000553960 ORAOV1Q8WV07 137 aa7.22□□□□□ -1.25
PABPN1-203ENST00000553960 IGLV10-54A0A075B6I4 117 aa7.21□□□□□ -1.26
PABPN1-203ENST00000553960 CASC10Q5T4H9 136 aa7.21□□□□□ -1.26
PABPN1-203ENST00000553960 UBE2DNLQ8IWF7 75 aa7.21□□□□□ -1.26
PABPN1-203ENST00000553960 C15orf56Q8N910 161 aa7.21□□□□□ -1.26
PABPN1-203ENST00000553960 KRTAP1-5Q9BYS1 174 aa7.21□□□□□ -1.26
PABPN1-203ENST00000553960 TMEM238LA0A1B0GVL6 79 aa7.2□□□□□ -1.26
PABPN1-203ENST00000553960 A6NJY4 79 aa7.2□□□□□ -1.26
PABPN1-203ENST00000553960 VPS13DQ5THJ4 4388 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 IGKV2D-24A0A075B6R9 120 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 CKS1BP61024 79 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 SPAG11BQ08648 103 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 COL5A1-AS1Q5SY13 56 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
PABPN1-203ENST00000553960 HIST1H4GQ99525 98 aa7.19□□□□□ -1.26
PABPN1-203ENST00000553960 STARD9Q9P2P6 4700 aa7.18□□□□□ -1.26
PABPN1-203ENST00000553960 A6NDN8 102 aa7.18□□□□□ -1.26
PABPN1-203ENST00000553960 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
PABPN1-203ENST00000553960 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
PABPN1-203ENST00000553960 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
PABPN1-203ENST00000553960 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
PABPN1-203ENST00000553960 ADAMTSL4-AS1Q5T5F5 129 aa7.18□□□□□ -1.26
PABPN1-203ENST00000553960 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
PABPN1-203ENST00000553960 CNBPP62633 177 aaKnown RBP7.17□□□□□ -1.26
PABPN1-203ENST00000553960 PLECQ15149 4684 aaKnown RBP7.16□□□□□ -1.26
PABPN1-203ENST00000553960 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
PABPN1-203ENST00000553960 A0A0B4J2C4 111 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 NDUFC2O95298 119 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 HINT1P49773 126 aaPredicted RBP7.16□□□□□ -1.26
PABPN1-203ENST00000553960 FXYD2P54710 66 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 LINC00476Q8WZB0 136 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 TOMM7Q9P0U1 55 aa7.16□□□□□ -1.26
PABPN1-203ENST00000553960 DNAH1Q9P2D7 4330 aa7.15□□□□□ -1.26
PABPN1-203ENST00000553960 EREGO14944 169 aa7.15□□□□□ -1.26
PABPN1-203ENST00000553960 DNAH6Q9C0G6 4158 aa7.15□□□□□ -1.27
PABPN1-203ENST00000553960 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
PABPN1-203ENST00000553960 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
PABPN1-203ENST00000553960 LRCOL1A6NCL2 159 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 SMIM13P0DJ93 91 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 C2orf82Q6UX34 121 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 UNQ6190/PRO20217Q6UXQ8 127 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 Q9HAA7 133 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 C6orf48Q9UBA6 75 aa7.13□□□□□ -1.27
PABPN1-203ENST00000553960 A4D1N5 150 aa7.12□□□□□ -1.27
PABPN1-203ENST00000553960 NDUFC2-KCTD14E9PQ53 114 aa7.12□□□□□ -1.27
PABPN1-203ENST00000553960 C10orf25Q5T742 122 aa7.12□□□□□ -1.27
PABPN1-203ENST00000553960 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
PABPN1-203ENST00000553960 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
PABPN1-203ENST00000553960 CFC1P0CG37 223 aa7.11□□□□□ -1.27
PABPN1-203ENST00000553960 SOSTDC1Q6X4U4 206 aa7.11□□□□□ -1.27
PABPN1-203ENST00000553960 C6orf223Q8N319 242 aa7.11□□□□□ -1.27
PABPN1-203ENST00000553960 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
PABPN1-203ENST00000553960 PLA2G2DQ9UNK4 145 aa7.11□□□□□ -1.27
PABPN1-203ENST00000553960 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
PABPN1-203ENST00000553960 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
PABPN1-203ENST00000553960 LINC00158P58513 81 aa7.1□□□□□ -1.27
PABPN1-203ENST00000553960 Q6ZRU5 148 aa7.1□□□□□ -1.27
PABPN1-203ENST00000553960 PRO1854Q9UHT4 67 aa7.1□□□□□ -1.27
PABPN1-203ENST00000553960 SLPIP03973 132 aa7.09□□□□□ -1.27
PABPN1-203ENST00000553960 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
PABPN1-203ENST00000553960 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
PABPN1-203ENST00000553960 C9orf118A6NHY6 69 aa7.08□□□□□ -1.28
PABPN1-203ENST00000553960 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
PABPN1-203ENST00000553960 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
PABPN1-203ENST00000553960 LYSTQ99698 3801 aa7.08□□□□□ -1.28
PABPN1-203ENST00000553960 IGLV5-37A0A075B6J1 123 aa7.07□□□□□ -1.28
PABPN1-203ENST00000553960 TRAV13-2A0A0B4J235 113 aa7.07□□□□□ -1.28
PABPN1-203ENST00000553960 PSCAO43653 123 aa7.07□□□□□ -1.28
PABPN1-203ENST00000553960 HIGD2BQ4VC39 106 aa7.07□□□□□ -1.28
PABPN1-203ENST00000553960 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
PABPN1-203ENST00000553960 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
PABPN1-203ENST00000553960 EPM2AB3EWF7 344 aa7.06□□□□□ -1.28
PABPN1-203ENST00000553960 PFN2P35080 140 aa7.06□□□□□ -1.28
PABPN1-203ENST00000553960 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
PABPN1-203ENST00000553960 IGKV2-28A0A075B6P5 120 aa7.05□□□□□ -1.28
PABPN1-203ENST00000553960 A0A087WTM6 91 aa7.05□□□□□ -1.28
PABPN1-203ENST00000553960 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
PABPN1-203ENST00000553960 IGKV2D-28P01615 120 aa7.05□□□□□ -1.28
PABPN1-203ENST00000553960 WFDC2Q14508 124 aa7.05□□□□□ -1.28
PABPN1-203ENST00000553960 C9orf116Q5BN46 136 aaPredicted RBP7.05□□□□□ -1.28
PABPN1-203ENST00000553960 DAND5Q8N907 189 aa7.05□□□□□ -1.28
PABPN1-203ENST00000553960 BATFQ16520 125 aa7.04□□□□□ -1.28
PABPN1-203ENST00000553960 LINC00526Q96FQ7 95 aa7.04□□□□□ -1.28
PABPN1-203ENST00000553960 CBY1Q9Y3M2 126 aa7.04□□□□□ -1.28
PABPN1-203ENST00000553960 LCE6AA0A183 80 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 C16orf90A8MZG2 172 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 LYRM7Q5U5X0 104 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms